RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 SH3PXD2AQ5TCZ1 1133 aa6.31□□□□□ -1.4
GPHN-216ENST00000557678 CHSY3Q70JA7 882 aa6.31□□□□□ -1.4
GPHN-216ENST00000557678 PROSER2Q86WR7 435 aaPredicted RBP6.31□□□□□ -1.4
GPHN-216ENST00000557678 UCN2Q96RP3 112 aa6.31□□□□□ -1.4
GPHN-216ENST00000557678 TSPAN10Q9H1Z9 355 aaPredicted RBP6.31□□□□□ -1.4
GPHN-216ENST00000557678 STRN4Q9NRL3 753 aa6.31□□□□□ -1.4
GPHN-216ENST00000557678 SFI1A8K8P3 1242 aa6.3□□□□□ -1.4
GPHN-216ENST00000557678 GNB5O14775 395 aa6.3□□□□□ -1.4
GPHN-216ENST00000557678 ZBTB7BO15156 539 aaPredicted RBP6.3□□□□□ -1.4
GPHN-216ENST00000557678 PPP1R12BO60237 982 aaPredicted RBP6.3□□□□□ -1.4
GPHN-216ENST00000557678 RASA1P20936 1047 aa6.3□□□□□ -1.4
GPHN-216ENST00000557678 PSMA6P60900 246 aaKnown RBP6.3□□□□□ -1.4
GPHN-216ENST00000557678 TMEM132AQ24JP5 1023 aa6.3□□□□□ -1.4
GPHN-216ENST00000557678 FAM182BQ5T319 152 aa6.3□□□□□ -1.4
GPHN-216ENST00000557678 LARGE2Q8N3Y3 721 aa6.3□□□□□ -1.4
GPHN-216ENST00000557678 CHMP7Q8WUX9 453 aaPredicted RBP6.3□□□□□ -1.4
GPHN-216ENST00000557678 GLMNQ92990 594 aa6.3□□□□□ -1.4
GPHN-216ENST00000557678 SUV39H2Q9H5I1 410 aa6.3□□□□□ -1.4
GPHN-216ENST00000557678 TFIP11Q9UBB9 837 aaKnown RBP6.3□□□□□ -1.4
GPHN-216ENST00000557678 KRBA1A5PL33 1030 aa6.29□□□□□ -1.4
GPHN-216ENST00000557678 EML1O00423 815 aa6.29□□□□□ -1.4
GPHN-216ENST00000557678 ALAS2P22557 587 aa6.29□□□□□ -1.4
GPHN-216ENST00000557678 EPHA4P54764 986 aa6.29□□□□□ -1.4
GPHN-216ENST00000557678 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
GPHN-216ENST00000557678 ZNF468Q5VIY5 522 aaPredicted RBP6.29□□□□□ -1.4
GPHN-216ENST00000557678 SYT9Q86SS6 491 aa6.29□□□□□ -1.4
GPHN-216ENST00000557678 FCHSD1Q86WN1 690 aa6.29□□□□□ -1.4
GPHN-216ENST00000557678 TSEN2Q8NCE0 465 aaKnown RBP6.29□□□□□ -1.4
GPHN-216ENST00000557678 CALR3Q96L12 384 aaKnown RBP6.29□□□□□ -1.4
GPHN-216ENST00000557678 CEP63Q96MT8 703 aa6.29□□□□□ -1.4
GPHN-216ENST00000557678 HINFPQ9BQA5 517 aa6.29□□□□□ -1.4
GPHN-216ENST00000557678 COL8A1P27658 744 aa6.28□□□□□ -1.4
GPHN-216ENST00000557678 LAMC2Q13753 1193 aa6.28□□□□□ -1.4
GPHN-216ENST00000557678 LARP1Q6PKG0 1096 aaKnown RBP6.28□□□□□ -1.4
GPHN-216ENST00000557678 LINC00114Q6XXX2 140 aa6.28□□□□□ -1.4
GPHN-216ENST00000557678 ALYREFQ86V81 257 aaKnown RBP6.28□□□□□ -1.4
GPHN-216ENST00000557678 NGLY1Q96IV0 654 aa6.28□□□□□ -1.4
GPHN-216ENST00000557678 HSH2DQ96JZ2 352 aa6.28□□□□□ -1.4
GPHN-216ENST00000557678 PHACTR1Q9C0D0 580 aa6.28□□□□□ -1.4
GPHN-216ENST00000557678 AVENQ9NQS1 362 aaPredicted RBP6.28□□□□□ -1.4
GPHN-216ENST00000557678 NOP53Q9NZM5 478 aaKnown RBP6.28□□□□□ -1.4
GPHN-216ENST00000557678 ANKIB1Q9P2G1 1089 aa6.28□□□□□ -1.4
GPHN-216ENST00000557678 KLF15Q9UIH9 416 aa6.28□□□□□ -1.4
GPHN-216ENST00000557678 EFSO43281 561 aa6.27□□□□□ -1.41
GPHN-216ENST00000557678 SFSWAPQ12872 951 aaKnown RBP6.27□□□□□ -1.41
GPHN-216ENST00000557678 NEUROD1Q13562 356 aa6.27□□□□□ -1.41
GPHN-216ENST00000557678 HCN2Q9UL51 889 aa6.27□□□□□ -1.41
GPHN-216ENST00000557678 GPC6Q9Y625 555 aaPredicted RBP6.27□□□□□ -1.41
GPHN-216ENST00000557678 LGR5O75473 907 aa6.26□□□□□ -1.41
GPHN-216ENST00000557678 DGKGP49619 791 aa6.26□□□□□ -1.41
GPHN-216ENST00000557678 SEC13P55735 322 aa6.26□□□□□ -1.41
GPHN-216ENST00000557678 TBC1D8BQ0IIM8 1120 aa6.26□□□□□ -1.41
GPHN-216ENST00000557678 RAB44Q7Z6P3 723 aaPredicted RBP6.26□□□□□ -1.41
GPHN-216ENST00000557678 SIX5Q8N196 739 aa6.26□□□□□ -1.41
GPHN-216ENST00000557678 SCG3Q8WXD2 468 aaKnown RBP6.26□□□□□ -1.41
GPHN-216ENST00000557678 BRD7Q9NPI1 651 aa6.26□□□□□ -1.41
GPHN-216ENST00000557678 ATAD2Q6PL18 1390 aa6.26□□□□□ -1.41
GPHN-216ENST00000557678 ELOA3CA0A087WX78 387 aaPredicted RBP6.25□□□□□ -1.41
GPHN-216ENST00000557678 ELOA3DA6NLF2 546 aaPredicted RBP6.25□□□□□ -1.41
GPHN-216ENST00000557678 K7ELQ4 463 aaPredicted RBP6.25□□□□□ -1.41
GPHN-216ENST00000557678 M0R2N6 131 aa6.25□□□□□ -1.41
GPHN-216ENST00000557678 HOXB4P17483 251 aaPredicted RBP6.25□□□□□ -1.41
GPHN-216ENST00000557678 ELOA3BQ3SY89 546 aa6.25□□□□□ -1.41
GPHN-216ENST00000557678 C1orf53Q5VUE5 145 aa6.25□□□□□ -1.41
GPHN-216ENST00000557678 ELOA3Q8NG57 546 aa6.25□□□□□ -1.41
GPHN-216ENST00000557678 KRTAP4-12Q9BQ66 201 aa6.25□□□□□ -1.41
GPHN-216ENST00000557678 MAFBQ9Y5Q3 323 aaPredicted RBP6.25□□□□□ -1.41
GPHN-216ENST00000557678 FURINP09958 794 aa6.24□□□□□ -1.41
GPHN-216ENST00000557678 ITGB7P26010 798 aa6.24□□□□□ -1.41
GPHN-216ENST00000557678 LMOD1P29536 600 aaPredicted RBP6.24□□□□□ -1.41
GPHN-216ENST00000557678 SPEM2Q0P670 501 aa6.24□□□□□ -1.41
GPHN-216ENST00000557678 LCE3BQ5TA77 95 aa6.24□□□□□ -1.41
GPHN-216ENST00000557678 ALDH16A1Q8IZ83 802 aa6.24□□□□□ -1.41
GPHN-216ENST00000557678 ZNF280CQ8ND82 737 aa6.24□□□□□ -1.41
GPHN-216ENST00000557678 SUSD3Q96L08 255 aa6.24□□□□□ -1.41
GPHN-216ENST00000557678 SLC30A3Q99726 388 aa6.24□□□□□ -1.41
GPHN-216ENST00000557678 PLVAPQ9BX97 442 aa6.24□□□□□ -1.41
GPHN-216ENST00000557678 IGFLR1Q9H665 355 aa6.24□□□□□ -1.41
GPHN-216ENST00000557678 SIN3BO75182 1162 aa6.23□□□□□ -1.41
GPHN-216ENST00000557678 BAG6P46379 1132 aa6.23□□□□□ -1.41
GPHN-216ENST00000557678 DPYDQ12882 1025 aa6.23□□□□□ -1.41
GPHN-216ENST00000557678 FNBP4Q8N3X1 1017 aaPredicted RBP6.23□□□□□ -1.41
GPHN-216ENST00000557678 BHMTQ93088 406 aa6.23□□□□□ -1.41
GPHN-216ENST00000557678 PPP1R12CQ9BZL4 782 aa6.23□□□□□ -1.41
GPHN-216ENST00000557678 KCNH4Q9UQ05 1017 aa6.23□□□□□ -1.41
GPHN-216ENST00000557678 SPDYE3A6NKU9 549 aa6.22□□□□□ -1.41
GPHN-216ENST00000557678 C1QTNF9BB2RNN3 333 aa6.22□□□□□ -1.41
GPHN-216ENST00000557678 HIRAP54198 1017 aaPredicted RBP6.22□□□□□ -1.41
GPHN-216ENST00000557678 HIF1AQ16665 826 aa6.22□□□□□ -1.41
GPHN-216ENST00000557678 C7orf43Q8WVR3 580 aa6.22□□□□□ -1.41
GPHN-216ENST00000557678 KRTAP9-9Q9BYP9 154 aa6.22□□□□□ -1.41
GPHN-216ENST00000557678 KRTAP9-4Q9BYQ2 154 aa6.22□□□□□ -1.41
GPHN-216ENST00000557678 VRTNQ9H8Y1 702 aa6.22□□□□□ -1.41
GPHN-216ENST00000557678 M0R082 166 aa6.21□□□□□ -1.42
GPHN-216ENST00000557678 C21orf2O43822 256 aa6.21□□□□□ -1.42
GPHN-216ENST00000557678 CRTC2Q53ET0 693 aaPredicted RBP6.21□□□□□ -1.42
GPHN-216ENST00000557678 PRRT3Q5FWE3 981 aa6.21□□□□□ -1.42
GPHN-216ENST00000557678 CD163Q86VB7 1156 aa6.21□□□□□ -1.42
GPHN-216ENST00000557678 GAS2L2Q8NHY3 880 aa6.21□□□□□ -1.42
GPHN-216ENST00000557678 ZNF417Q8TAU3 575 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms