RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 TIAM2Q8IVF5 1701 aa9.64□□□□□ -0.87
SPTLC2-206ENST00000557566 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 TNRC18O15417 2968 aaPredicted RBP9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 LOC102724428A0A0B4J2F2 783 aa9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 RIMBP2O15034 1052 aa9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 HOXB3P14651 431 aaPredicted RBP9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 KCNA3P22001 575 aa9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 HOXC9P31274 260 aa9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 SIK1P57059 783 aa9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 DOK7Q18PE1 504 aa9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 PARP3Q9Y6F1 533 aa9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 CCDC88AQ3V6T2 1871 aa9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 EDC4Q6P2E9 1401 aaKnown RBP9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 CNTNAP1P78357 1384 aa9.63□□□□□ -0.87
SPTLC2-206ENST00000557566 PDE4DIPQ5VU43 2346 aa9.62□□□□□ -0.87
SPTLC2-206ENST00000557566 CD163L1Q9NR16 1453 aa9.62□□□□□ -0.87
SPTLC2-206ENST00000557566 TATP17735 454 aaPredicted RBP9.62□□□□□ -0.87
SPTLC2-206ENST00000557566 AMPHP49418 695 aa9.62□□□□□ -0.87
SPTLC2-206ENST00000557566 RGS19P49795 217 aa9.62□□□□□ -0.87
SPTLC2-206ENST00000557566 LBX1P52954 281 aa9.62□□□□□ -0.87
SPTLC2-206ENST00000557566 TRAPPC3LQ5T215 181 aa9.62□□□□□ -0.87
SPTLC2-206ENST00000557566 HDGFL2Q7Z4V5 671 aaPredicted RBP9.62□□□□□ -0.87
SPTLC2-206ENST00000557566 KDM6AO15550 1401 aaPredicted RBP9.62□□□□□ -0.87
SPTLC2-206ENST00000557566 VIRMAQ69YN4 1812 aaKnown RBP9.61□□□□□ -0.87
SPTLC2-206ENST00000557566 RTCBQ9Y3I0 505 aaKnown RBP9.61□□□□□ -0.87
SPTLC2-206ENST00000557566 MAP3K19Q56UN5 1328 aa9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 SMG6Q86US8 1419 aaKnown RBP9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 CCDC85CA6NKD9 419 aa9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 HOXB1P14653 301 aaPredicted RBP9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 LMNB1P20700 586 aa9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 ATP6V1AP38606 617 aa9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 NBPF6Q5VWK0 638 aa9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 PIGBQ92521 554 aa9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 NBPF4Q96M43 638 aa9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 RTL1A6NKG5 1358 aa9.6□□□□□ -0.87
SPTLC2-206ENST00000557566 TESPA1A2RU30 521 aaPredicted RBP9.59□□□□□ -0.87
SPTLC2-206ENST00000557566 RASSF7Q02833 373 aa9.59□□□□□ -0.87
SPTLC2-206ENST00000557566 ITPK1Q13572 414 aa9.59□□□□□ -0.87
SPTLC2-206ENST00000557566 USHBP1Q8N6Y0 703 aa9.59□□□□□ -0.87
SPTLC2-206ENST00000557566 WBP1LQ9NX94 342 aa9.59□□□□□ -0.87
SPTLC2-206ENST00000557566 CYP27B1O15528 508 aa9.58□□□□□ -0.88
SPTLC2-206ENST00000557566 GYS1P13807 737 aa9.58□□□□□ -0.88
SPTLC2-206ENST00000557566 RFC4P35249 363 aa9.58□□□□□ -0.88
SPTLC2-206ENST00000557566 TMC1Q8TDI8 760 aa9.58□□□□□ -0.88
SPTLC2-206ENST00000557566 COL5A3P25940 1745 aaPredicted RBP9.57□□□□□ -0.88
SPTLC2-206ENST00000557566 POTECB2RU33 542 aa9.57□□□□□ -0.88
SPTLC2-206ENST00000557566 HSPA8P11142 646 aaKnown RBP9.57□□□□□ -0.88
SPTLC2-206ENST00000557566 CHRNA5P30532 468 aa9.57□□□□□ -0.88
SPTLC2-206ENST00000557566 VEGFBP49765 207 aa9.57□□□□□ -0.88
SPTLC2-206ENST00000557566 COG3Q96JB2 828 aa9.57□□□□□ -0.88
SPTLC2-206ENST00000557566 TERF2IPQ9NYB0 399 aa9.57□□□□□ -0.88
SPTLC2-206ENST00000557566 TMOD3Q9NYL9 352 aa9.57□□□□□ -0.88
SPTLC2-206ENST00000557566 ZNF831Q5JPB2 1677 aa9.57□□□□□ -0.88
SPTLC2-206ENST00000557566 DICER1Q9UPY3 1922 aaKnown RBP9.56□□□□□ -0.88
SPTLC2-206ENST00000557566 A0A1W2PP64 1363 aa9.56□□□□□ -0.88
SPTLC2-206ENST00000557566 TULP1O00294 542 aaPredicted RBP9.56□□□□□ -0.88
SPTLC2-206ENST00000557566 SEMA3EO15041 775 aa9.56□□□□□ -0.88
SPTLC2-206ENST00000557566 TBC1D12O60347 775 aa9.55□□□□□ -0.88
SPTLC2-206ENST00000557566 CENPBP07199 599 aaPredicted RBP9.55□□□□□ -0.88
SPTLC2-206ENST00000557566 MAP3K9P80192 1104 aa9.55□□□□□ -0.88
SPTLC2-206ENST00000557566 MAP2K1Q02750 393 aaPredicted RBP9.55□□□□□ -0.88
SPTLC2-206ENST00000557566 ASAP1Q9ULH1 1129 aa9.55□□□□□ -0.88
SPTLC2-206ENST00000557566 DLEC1Q9Y238 1755 aa9.55□□□□□ -0.88
SPTLC2-206ENST00000557566 ROCK2O75116 1388 aaKnown RBP9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 KDRP35968 1356 aa9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 ZNF316A6NFI3 1004 aaPredicted RBP9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 TMEM88BA6NKF7 163 aa9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 RPS6KA4O75676 772 aa9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 VARS2Q5ST30 1063 aaKnown RBP9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 SLC12A5Q9H2X9 1139 aa9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 EMILIN3Q9NT22 766 aa9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 PASKQ96RG2 1323 aa9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 CNTNAP4Q9C0A0 1308 aa9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 MYH14Q7Z406 1995 aaKnown RBP9.54□□□□□ -0.88
SPTLC2-206ENST00000557566 DPYSL4O14531 572 aa9.53□□□□□ -0.88
SPTLC2-206ENST00000557566 FBLN1P23142 703 aa9.53□□□□□ -0.88
SPTLC2-206ENST00000557566 SPG7Q9UQ90 795 aa9.53□□□□□ -0.88
SPTLC2-206ENST00000557566 PCDHGA4Q9Y5G9 962 aa9.53□□□□□ -0.88
SPTLC2-206ENST00000557566 SCN4AP35499 1836 aa9.52□□□□□ -0.89
SPTLC2-206ENST00000557566 SPDYE16A6NNV3 312 aaPredicted RBP9.52□□□□□ -0.89
SPTLC2-206ENST00000557566 DDR1Q08345 913 aa9.52□□□□□ -0.89
SPTLC2-206ENST00000557566 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.89
SPTLC2-206ENST00000557566 ARSIQ5FYB1 569 aa9.52□□□□□ -0.89
SPTLC2-206ENST00000557566 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
SPTLC2-206ENST00000557566 ATG3Q9NT62 314 aa9.52□□□□□ -0.89
SPTLC2-206ENST00000557566 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.89
SPTLC2-206ENST00000557566 INSRP06213 1382 aa9.51□□□□□ -0.89
SPTLC2-206ENST00000557566 RASSF10A6NK89 507 aa9.51□□□□□ -0.89
SPTLC2-206ENST00000557566 PDIA6Q15084 440 aa9.51□□□□□ -0.89
SPTLC2-206ENST00000557566 DEFB115Q30KQ5 88 aa9.51□□□□□ -0.89
SPTLC2-206ENST00000557566 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
SPTLC2-206ENST00000557566 LDHDQ86WU2 507 aa9.51□□□□□ -0.89
SPTLC2-206ENST00000557566 TTLL6Q8N841 843 aa9.51□□□□□ -0.89
SPTLC2-206ENST00000557566 KHSRPQ92945 711 aaKnown RBP eCLIP9.51□□□□□ -0.89
SPTLC2-206ENST00000557566 USP42Q9H9J4 1324 aaKnown RBP9.51□□□□□ -0.89
SPTLC2-206ENST00000557566 IQCA1LA6NCM1 817 aa9.5□□□□□ -0.89
SPTLC2-206ENST00000557566 NFKBIEO00221 500 aa9.5□□□□□ -0.89
SPTLC2-206ENST00000557566 POLRMTO00411 1230 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms