RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 SERPINB2P05120 415 aa12.15□□□□□ -0.46
NPC2-209ENST00000557510 PRELPP51888 382 aa12.15□□□□□ -0.46
NPC2-209ENST00000557510 ZNF790Q6PG37 636 aa12.15□□□□□ -0.46
NPC2-209ENST00000557510 BICDL1Q6ZP65 573 aa12.15□□□□□ -0.46
NPC2-209ENST00000557510 PAXIP1Q6ZW49 1069 aaPredicted RBP12.15□□□□□ -0.46
NPC2-209ENST00000557510 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
NPC2-209ENST00000557510 GAS2L2Q8NHY3 880 aa12.15□□□□□ -0.46
NPC2-209ENST00000557510 BCORQ6W2J9 1755 aa12.15□□□□□ -0.46
NPC2-209ENST00000557510 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
NPC2-209ENST00000557510 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
NPC2-209ENST00000557510 PRKAR2AP13861 404 aaKnown RBP12.14□□□□□ -0.47
NPC2-209ENST00000557510 PPP2R1AP30153 589 aa12.14□□□□□ -0.47
NPC2-209ENST00000557510 RASSF7Q02833 373 aa12.14□□□□□ -0.47
NPC2-209ENST00000557510 TEFQ10587 303 aa12.14□□□□□ -0.47
NPC2-209ENST00000557510 TBC1D9BQ66K14 1250 aa12.14□□□□□ -0.47
NPC2-209ENST00000557510 HS6ST3Q8IZP7 471 aa12.14□□□□□ -0.47
NPC2-209ENST00000557510 CCDC24Q8N4L8 307 aa12.14□□□□□ -0.47
NPC2-209ENST00000557510 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
NPC2-209ENST00000557510 PRAMEF22A3QJZ6 481 aa12.13□□□□□ -0.47
NPC2-209ENST00000557510 STARD3NLO95772 234 aa12.13□□□□□ -0.47
NPC2-209ENST00000557510 A1BGP04217 495 aa12.13□□□□□ -0.47
NPC2-209ENST00000557510 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
NPC2-209ENST00000557510 TBC1D2BQ9UPU7 963 aa12.13□□□□□ -0.47
NPC2-209ENST00000557510 ZNF330Q9Y3S2 320 aaPredicted RBP12.13□□□□□ -0.47
NPC2-209ENST00000557510 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
NPC2-209ENST00000557510 TIAM2Q8IVF5 1701 aa12.12□□□□□ -0.47
NPC2-209ENST00000557510 C2CD5Q86YS7 1000 aa12.12□□□□□ -0.47
NPC2-209ENST00000557510 TNRC6CQ9HCJ0 1690 aaKnown RBP12.12□□□□□ -0.47
NPC2-209ENST00000557510 WDR90Q96KV7 1748 aa12.11□□□□□ -0.47
NPC2-209ENST00000557510 FER1L6Q2WGJ9 1857 aa12.11□□□□□ -0.47
NPC2-209ENST00000557510 BTBD11A6QL63 1104 aa12.11□□□□□ -0.47
NPC2-209ENST00000557510 TOMM70O94826 608 aa12.11□□□□□ -0.47
NPC2-209ENST00000557510 PYGBP11216 843 aa12.11□□□□□ -0.47
NPC2-209ENST00000557510 DCTN1Q14203 1278 aa12.11□□□□□ -0.47
NPC2-209ENST00000557510 MCM10Q7L590 875 aa12.11□□□□□ -0.47
NPC2-209ENST00000557510 FMNL2Q96PY5 1086 aa12.11□□□□□ -0.47
NPC2-209ENST00000557510 SLX4Q8IY92 1834 aa12.1□□□□□ -0.47
NPC2-209ENST00000557510 A0A087WZG4 1122 aa12.1□□□□□ -0.47
NPC2-209ENST00000557510 U2AF1L5P0DN76 240 aaPredicted RBP12.1□□□□□ -0.47
NPC2-209ENST00000557510 IL6STP40189 918 aaPredicted RBP12.1□□□□□ -0.47
NPC2-209ENST00000557510 U2AF1Q01081 240 aaKnown RBP eCLIP12.1□□□□□ -0.47
NPC2-209ENST00000557510 PRR5LQ6MZQ0 368 aa12.1□□□□□ -0.47
NPC2-209ENST00000557510 CFAP53Q96M91 514 aa12.1□□□□□ -0.47
NPC2-209ENST00000557510 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
NPC2-209ENST00000557510 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
NPC2-209ENST00000557510 DICER1Q9UPY3 1922 aaKnown RBP12.09□□□□□ -0.47
NPC2-209ENST00000557510 NFKBIEO00221 500 aa12.09□□□□□ -0.47
NPC2-209ENST00000557510 CAMTA2O94983 1202 aa12.09□□□□□ -0.47
NPC2-209ENST00000557510 HTRA3P83110 453 aa12.09□□□□□ -0.47
NPC2-209ENST00000557510 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
NPC2-209ENST00000557510 TTLL6Q8N841 843 aa12.09□□□□□ -0.47
NPC2-209ENST00000557510 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
NPC2-209ENST00000557510 RRAGCQ9HB90 399 aa12.09□□□□□ -0.47
NPC2-209ENST00000557510 H0YIN7 160 aa12.08□□□□□ -0.48
NPC2-209ENST00000557510 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 NBPF26B4DH59 902 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 APLP1P51693 650 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 NBPF10Q6P3W6 841 aaKnown RBP12.07□□□□□ -0.48
NPC2-209ENST00000557510 PIP4P2Q8N4L2 257 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 NBPF15Q8N660 670 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 DNAJC5GQ8N7S2 189 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 SPRYD3Q8NCJ5 442 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 RBM46Q8TBY0 533 aaKnown RBP12.07□□□□□ -0.48
NPC2-209ENST00000557510 TSPYL2Q9H2G4 693 aaPredicted RBP12.07□□□□□ -0.48
NPC2-209ENST00000557510 MIS18AQ9NYP9 233 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 LAMB4A4D0S4 1761 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 KDM2BQ8NHM5 1336 aa12.07□□□□□ -0.48
NPC2-209ENST00000557510 LMNB1P20700 586 aa12.06□□□□□ -0.48
NPC2-209ENST00000557510 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
NPC2-209ENST00000557510 ZNF622Q969S3 477 aaKnown RBP eCLIP12.06□□□□□ -0.48
NPC2-209ENST00000557510 BRIP1Q9BX63 1249 aa12.06□□□□□ -0.48
NPC2-209ENST00000557510 C21orf2O43822 256 aa12.05□□□□□ -0.48
NPC2-209ENST00000557510 SNRPA1P09661 255 aaKnown RBP12.05□□□□□ -0.48
NPC2-209ENST00000557510 C16orf71Q8IYS4 520 aaPredicted RBP12.05□□□□□ -0.48
NPC2-209ENST00000557510 CNBD1Q8NA66 436 aa12.05□□□□□ -0.48
NPC2-209ENST00000557510 RTF1Q92541 710 aaKnown RBP12.05□□□□□ -0.48
NPC2-209ENST00000557510 SETDB2Q96T68 719 aa12.05□□□□□ -0.48
NPC2-209ENST00000557510 PDE6BP35913 854 aa12.04□□□□□ -0.48
NPC2-209ENST00000557510 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
NPC2-209ENST00000557510 NUP98P52948 1817 aa12.04□□□□□ -0.48
NPC2-209ENST00000557510 GLTPD2A6NH11 291 aa12.03□□□□□ -0.48
NPC2-209ENST00000557510 POTECB2RU33 542 aa12.03□□□□□ -0.48
NPC2-209ENST00000557510 SRGNP10124 158 aa12.03□□□□□ -0.48
NPC2-209ENST00000557510 IFFO2Q5TF58 517 aa12.03□□□□□ -0.48
NPC2-209ENST00000557510 THUMPD2Q9BTF0 503 aaKnown RBP12.03□□□□□ -0.48
NPC2-209ENST00000557510 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
NPC2-209ENST00000557510 FSTL1Q12841 308 aa12.02□□□□□ -0.49
NPC2-209ENST00000557510 TAF7Q15545 349 aaPredicted RBP12.02□□□□□ -0.49
NPC2-209ENST00000557510 HLFQ16534 295 aa12.02□□□□□ -0.49
NPC2-209ENST00000557510 PRPF40BQ6NWY9 871 aaKnown RBP12.02□□□□□ -0.49
NPC2-209ENST00000557510 NPM2Q86SE8 214 aaKnown RBP12.02□□□□□ -0.49
NPC2-209ENST00000557510 PLEKHF1Q96S99 279 aa12.02□□□□□ -0.49
NPC2-209ENST00000557510 NPHP1O15259 732 aa12.01□□□□□ -0.49
NPC2-209ENST00000557510 HTATSF1O43719 755 aaKnown RBP12.01□□□□□ -0.49
NPC2-209ENST00000557510 ST5P78524 1137 aa12.01□□□□□ -0.49
NPC2-209ENST00000557510 STYK1Q6J9G0 422 aa12.01□□□□□ -0.49
NPC2-209ENST00000557510 OLFM4Q6UX06 510 aa12.01□□□□□ -0.49
NPC2-209ENST00000557510 NBPF5PQ86XG9 351 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms