RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 SAMD1Q6SPF0 538 aaPredicted RBP10.99□□□□□ -0.65
PCNX1-215ENST00000557428 NPM2Q86SE8 214 aaKnown RBP10.99□□□□□ -0.65
PCNX1-215ENST00000557428 CNBD1Q8NA66 436 aa10.99□□□□□ -0.65
PCNX1-215ENST00000557428 CNKSR1Q969H4 720 aa10.99□□□□□ -0.65
PCNX1-215ENST00000557428 BRIP1Q9BX63 1249 aa10.99□□□□□ -0.65
PCNX1-215ENST00000557428 TAF1DQ9H5J8 278 aaPredicted RBP10.99□□□□□ -0.65
PCNX1-215ENST00000557428 PDZRN3Q9UPQ7 1066 aa10.99□□□□□ -0.65
PCNX1-215ENST00000557428 TBC1D2BQ9UPU7 963 aa10.99□□□□□ -0.65
PCNX1-215ENST00000557428 BCORQ6W2J9 1755 aa10.98□□□□□ -0.65
PCNX1-215ENST00000557428 STARD3NLO95772 234 aa10.98□□□□□ -0.65
PCNX1-215ENST00000557428 TRIM26Q12899 539 aaPredicted RBP10.98□□□□□ -0.65
PCNX1-215ENST00000557428 WBP1LQ9NX94 342 aa10.98□□□□□ -0.65
PCNX1-215ENST00000557428 ZNF541Q9H0D2 1346 aa10.98□□□□□ -0.65
PCNX1-215ENST00000557428 LTBP3Q9NS15 1303 aa10.98□□□□□ -0.65
PCNX1-215ENST00000557428 MLLT1Q03111 559 aaPredicted RBP10.97□□□□□ -0.65
PCNX1-215ENST00000557428 DEFB115Q30KQ5 88 aa10.97□□□□□ -0.65
PCNX1-215ENST00000557428 SOGA3Q5TF21 947 aa10.97□□□□□ -0.65
PCNX1-215ENST00000557428 SETDB2Q96T68 719 aa10.97□□□□□ -0.65
PCNX1-215ENST00000557428 PANK3Q9H999 370 aa10.97□□□□□ -0.65
PCNX1-215ENST00000557428 HACL1Q9UJ83 578 aa10.97□□□□□ -0.65
PCNX1-215ENST00000557428 U3KPZ7 1027 aaPredicted RBP10.97□□□□□ -0.65
PCNX1-215ENST00000557428 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.65
PCNX1-215ENST00000557428 WDR33Q9C0J8 1336 aaKnown RBP10.96□□□□□ -0.65
PCNX1-215ENST00000557428 EPHX2P34913 555 aa10.96□□□□□ -0.65
PCNX1-215ENST00000557428 IL13P35225 146 aa10.96□□□□□ -0.65
PCNX1-215ENST00000557428 EIF5P55010 431 aaKnown RBP10.96□□□□□ -0.65
PCNX1-215ENST00000557428 CCDC93Q567U6 631 aa10.96□□□□□ -0.65
PCNX1-215ENST00000557428 MAP1SQ66K74 1059 aaPredicted RBP10.96□□□□□ -0.65
PCNX1-215ENST00000557428 STYK1Q6J9G0 422 aa10.96□□□□□ -0.65
PCNX1-215ENST00000557428 VSIG10Q8N0Z9 540 aa10.96□□□□□ -0.65
PCNX1-215ENST00000557428 MASTLQ96GX5 879 aa10.96□□□□□ -0.65
PCNX1-215ENST00000557428 BEGAINQ9BUH8 593 aa10.96□□□□□ -0.65
PCNX1-215ENST00000557428 ZNF277Q9NRM2 450 aaPredicted RBP10.96□□□□□ -0.65
PCNX1-215ENST00000557428 ADAMTSL1Q8N6G6 1762 aa10.95□□□□□ -0.66
PCNX1-215ENST00000557428 MAP2K1Q02750 393 aaPredicted RBP10.95□□□□□ -0.66
PCNX1-215ENST00000557428 L3MBTL3Q96JM7 780 aaPredicted RBP10.95□□□□□ -0.66
PCNX1-215ENST00000557428 RASSF10A6NK89 507 aa10.94□□□□□ -0.66
PCNX1-215ENST00000557428 ITGBL1O95965 494 aaPredicted RBP10.94□□□□□ -0.66
PCNX1-215ENST00000557428 SRGNP10124 158 aa10.94□□□□□ -0.66
PCNX1-215ENST00000557428 FKBP4Q02790 459 aaKnown RBP eCLIP10.94□□□□□ -0.66
PCNX1-215ENST00000557428 MTHFSDQ2M296 383 aaKnown RBP10.94□□□□□ -0.66
PCNX1-215ENST00000557428 OLFM4Q6UX06 510 aa10.94□□□□□ -0.66
PCNX1-215ENST00000557428 CNTROBQ8N137 903 aa10.94□□□□□ -0.66
PCNX1-215ENST00000557428 TSKSQ9UJT2 592 aa10.94□□□□□ -0.66
PCNX1-215ENST00000557428 GJA3Q9Y6H8 435 aa10.94□□□□□ -0.66
PCNX1-215ENST00000557428 TRPM7Q96QT4 1865 aa10.93□□□□□ -0.66
PCNX1-215ENST00000557428 HEG1Q9ULI3 1381 aa10.93□□□□□ -0.66
PCNX1-215ENST00000557428 FAM177BA6PVY3 158 aa10.93□□□□□ -0.66
PCNX1-215ENST00000557428 TEFQ10587 303 aa10.93□□□□□ -0.66
PCNX1-215ENST00000557428 NBPF5PQ86XG9 351 aaPredicted RBP10.93□□□□□ -0.66
PCNX1-215ENST00000557428 ZNF496Q96IT1 587 aaPredicted RBP10.93□□□□□ -0.66
PCNX1-215ENST00000557428 SIPA1L3O60292 1781 aaPredicted RBP10.93□□□□□ -0.66
PCNX1-215ENST00000557428 THSD7BQ9C0I4 1608 aa10.92□□□□□ -0.66
PCNX1-215ENST00000557428 CAMTA2O94983 1202 aa10.92□□□□□ -0.66
PCNX1-215ENST00000557428 A1BGP04217 495 aa10.92□□□□□ -0.66
PCNX1-215ENST00000557428 LMOD1P29536 600 aaPredicted RBP10.92□□□□□ -0.66
PCNX1-215ENST00000557428 PIP4K2AP48426 406 aaPredicted RBP10.92□□□□□ -0.66
PCNX1-215ENST00000557428 CYP4F22Q6NT55 531 aa10.92□□□□□ -0.66
PCNX1-215ENST00000557428 PNMA8AQ86V59 439 aaPredicted RBP10.92□□□□□ -0.66
PCNX1-215ENST00000557428 DZIP3Q86Y13 1208 aaKnown RBP10.92□□□□□ -0.66
PCNX1-215ENST00000557428 CAPNS2Q96L46 248 aa10.92□□□□□ -0.66
PCNX1-215ENST00000557428 NPR1P16066 1061 aa10.91□□□□□ -0.66
PCNX1-215ENST00000557428 IL6STP40189 918 aaPredicted RBP10.91□□□□□ -0.66
PCNX1-215ENST00000557428 IARSP41252 1262 aaKnown RBP10.91□□□□□ -0.66
PCNX1-215ENST00000557428 FMR1Q06787 632 aaKnown RBP eCLIP10.91□□□□□ -0.66
PCNX1-215ENST00000557428 TEX13AQ9BXU3 409 aaPredicted RBP10.91□□□□□ -0.66
PCNX1-215ENST00000557428 KNSTRNQ9Y448 316 aa10.91□□□□□ -0.66
PCNX1-215ENST00000557428 ECE1P42892 770 aa10.9□□□□□ -0.66
PCNX1-215ENST00000557428 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
PCNX1-215ENST00000557428 SYNE4Q8N205 404 aa10.9□□□□□ -0.66
PCNX1-215ENST00000557428 FMNL2Q96PY5 1086 aa10.9□□□□□ -0.66
PCNX1-215ENST00000557428 DDX21Q9NR30 783 aaKnown RBP eCLIP10.9□□□□□ -0.66
PCNX1-215ENST00000557428 CASP8AP2Q9UKL3 1982 aa10.9□□□□□ -0.66
PCNX1-215ENST00000557428 LTBP1Q14766 1721 aa10.89□□□□□ -0.67
PCNX1-215ENST00000557428 AOC2O75106 756 aa10.89□□□□□ -0.67
PCNX1-215ENST00000557428 EIF6P56537 245 aaKnown RBP10.89□□□□□ -0.67
PCNX1-215ENST00000557428 CNGB1Q14028 1251 aaPredicted RBP10.89□□□□□ -0.67
PCNX1-215ENST00000557428 RTKN2Q8IZC4 609 aa10.89□□□□□ -0.67
PCNX1-215ENST00000557428 JDP2Q8WYK2 163 aa10.89□□□□□ -0.67
PCNX1-215ENST00000557428 GPR101Q96P66 508 aaPredicted RBP10.89□□□□□ -0.67
PCNX1-215ENST00000557428 ZNF652Q9Y2D9 606 aa10.89□□□□□ -0.67
PCNX1-215ENST00000557428 TRAF5O00463 557 aa10.88□□□□□ -0.67
PCNX1-215ENST00000557428 U2SURPO15042 1029 aaKnown RBP10.88□□□□□ -0.67
PCNX1-215ENST00000557428 DIAPH1O60610 1272 aaKnown RBP10.88□□□□□ -0.67
PCNX1-215ENST00000557428 HSPA5P11021 654 aaKnown RBP10.88□□□□□ -0.67
PCNX1-215ENST00000557428 GTF2E1P29083 439 aaPredicted RBP10.88□□□□□ -0.67
PCNX1-215ENST00000557428 GPC2Q8N158 579 aa10.88□□□□□ -0.67
PCNX1-215ENST00000557428 C7orf43Q8WVR3 580 aa10.88□□□□□ -0.67
PCNX1-215ENST00000557428 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
PCNX1-215ENST00000557428 TNRC18O15417 2968 aaPredicted RBP10.87□□□□□ -0.67
PCNX1-215ENST00000557428 GNAT3A8MTJ3 354 aa10.87□□□□□ -0.67
PCNX1-215ENST00000557428 MCOLN1Q9GZU1 580 aa10.87□□□□□ -0.67
PCNX1-215ENST00000557428 NIP7Q9Y221 180 aaKnown RBP eCLIP10.87□□□□□ -0.67
PCNX1-215ENST00000557428 BTBD11A6QL63 1104 aa10.86□□□□□ -0.67
PCNX1-215ENST00000557428 FZD9O00144 591 aa10.86□□□□□ -0.67
PCNX1-215ENST00000557428 TCERG1O14776 1098 aaKnown RBP10.86□□□□□ -0.67
PCNX1-215ENST00000557428 KCNQ3O43525 872 aa10.86□□□□□ -0.67
PCNX1-215ENST00000557428 EPS15P42566 896 aa10.86□□□□□ -0.67
PCNX1-215ENST00000557428 EIF4G2P78344 907 aaKnown RBP eCLIP10.86□□□□□ -0.67
PCNX1-215ENST00000557428 DGKZQ13574 1117 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms