RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 CAMTA2O94983 1202 aa13.71□□□□□ -0.21
RDH11-210ENST00000557331 NPR1P16066 1061 aa13.71□□□□□ -0.21
RDH11-210ENST00000557331 ALDH1B1P30837 517 aa13.71□□□□□ -0.21
RDH11-210ENST00000557331 CTCFP49711 727 aaPredicted RBP13.71□□□□□ -0.21
RDH11-210ENST00000557331 GRIPAP1Q4V328 841 aa13.71□□□□□ -0.21
RDH11-210ENST00000557331 NBPF5PQ86XG9 351 aaPredicted RBP13.71□□□□□ -0.21
RDH11-210ENST00000557331 CNTNAP1P78357 1384 aa13.71□□□□□ -0.22
RDH11-210ENST00000557331 SCN4AP35499 1836 aa13.7□□□□□ -0.22
RDH11-210ENST00000557331 VIRMAQ69YN4 1812 aaKnown RBP13.7□□□□□ -0.22
RDH11-210ENST00000557331 KLRG2A4D1S0 409 aaPredicted RBP13.7□□□□□ -0.22
RDH11-210ENST00000557331 TMEM88BA6NKF7 163 aa13.7□□□□□ -0.22
RDH11-210ENST00000557331 BTBD11A6QL63 1104 aa13.7□□□□□ -0.22
RDH11-210ENST00000557331 PER1O15534 1290 aaPredicted RBP13.7□□□□□ -0.22
RDH11-210ENST00000557331 DDNO94850 711 aaPredicted RBP13.7□□□□□ -0.22
RDH11-210ENST00000557331 DZIP3Q86Y13 1208 aaKnown RBP13.7□□□□□ -0.22
RDH11-210ENST00000557331 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
RDH11-210ENST00000557331 PASKQ96RG2 1323 aa13.69□□□□□ -0.22
RDH11-210ENST00000557331 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
RDH11-210ENST00000557331 SNRPA1P09661 255 aaKnown RBP13.69□□□□□ -0.22
RDH11-210ENST00000557331 FKBP4Q02790 459 aaKnown RBP eCLIP13.69□□□□□ -0.22
RDH11-210ENST00000557331 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
RDH11-210ENST00000557331 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
RDH11-210ENST00000557331 CFAP53Q96M91 514 aa13.69□□□□□ -0.22
RDH11-210ENST00000557331 TAF1DQ9H5J8 278 aaPredicted RBP13.69□□□□□ -0.22
RDH11-210ENST00000557331 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
RDH11-210ENST00000557331 MKRN1Q9UHC7 482 aaKnown RBP13.69□□□□□ -0.22
RDH11-210ENST00000557331 HACL1Q9UJ83 578 aa13.69□□□□□ -0.22
RDH11-210ENST00000557331 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
RDH11-210ENST00000557331 A1BGP04217 495 aa13.68□□□□□ -0.22
RDH11-210ENST00000557331 RTF1Q92541 710 aaKnown RBP13.68□□□□□ -0.22
RDH11-210ENST00000557331 KIF7Q2M1P5 1343 aa13.67□□□□□ -0.22
RDH11-210ENST00000557331 SCN7AQ01118 1682 aa13.67□□□□□ -0.22
RDH11-210ENST00000557331 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
RDH11-210ENST00000557331 CC2D1BQ5T0F9 858 aaKnown RBP13.67□□□□□ -0.22
RDH11-210ENST00000557331 ANKRD31Q8N7Z5 1873 aa13.67□□□□□ -0.22
RDH11-210ENST00000557331 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
RDH11-210ENST00000557331 GPC2Q8N158 579 aa13.66□□□□□ -0.22
RDH11-210ENST00000557331 JDP2Q8WYK2 163 aa13.66□□□□□ -0.22
RDH11-210ENST00000557331 SLX4Q8IY92 1834 aa13.65□□□□□ -0.22
RDH11-210ENST00000557331 ITGBL1O95965 494 aaPredicted RBP13.65□□□□□ -0.22
RDH11-210ENST00000557331 GTF2E1P29083 439 aaPredicted RBP13.65□□□□□ -0.22
RDH11-210ENST00000557331 NYXQ9GZU5 481 aa13.65□□□□□ -0.22
RDH11-210ENST00000557331 WBP1LQ9NX94 342 aa13.65□□□□□ -0.22
RDH11-210ENST00000557331 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
RDH11-210ENST00000557331 ARFGEF2Q9Y6D5 1785 aa13.64□□□□□ -0.23
RDH11-210ENST00000557331 RASSF10A6NK89 507 aa13.64□□□□□ -0.23
RDH11-210ENST00000557331 FZD9O00144 591 aa13.64□□□□□ -0.23
RDH11-210ENST00000557331 FOXN1O15353 648 aa13.64□□□□□ -0.23
RDH11-210ENST00000557331 EPHX2P34913 555 aa13.64□□□□□ -0.23
RDH11-210ENST00000557331 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
RDH11-210ENST00000557331 PSMD1Q99460 953 aa13.64□□□□□ -0.23
RDH11-210ENST00000557331 NIP7Q9Y221 180 aaKnown RBP eCLIP13.64□□□□□ -0.23
RDH11-210ENST00000557331 USP16Q9Y5T5 823 aa13.64□□□□□ -0.23
RDH11-210ENST00000557331 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
RDH11-210ENST00000557331 POTEJP0CG39 1038 aa13.63□□□□□ -0.23
RDH11-210ENST00000557331 IARSP41252 1262 aaKnown RBP13.63□□□□□ -0.23
RDH11-210ENST00000557331 VEGFBP49765 207 aa13.63□□□□□ -0.23
RDH11-210ENST00000557331 DEFB115Q30KQ5 88 aa13.63□□□□□ -0.23
RDH11-210ENST00000557331 EAPPQ56P03 285 aaPredicted RBP13.63□□□□□ -0.23
RDH11-210ENST00000557331 CNTROBQ8N137 903 aa13.63□□□□□ -0.23
RDH11-210ENST00000557331 CCER1Q8TC90 406 aaPredicted RBP13.63□□□□□ -0.23
RDH11-210ENST00000557331 COL11A2P13942 1736 aaPredicted RBP13.62□□□□□ -0.23
RDH11-210ENST00000557331 ERVV-1B6SEH8 477 aa13.62□□□□□ -0.23
RDH11-210ENST00000557331 LMOD1P29536 600 aaPredicted RBP13.62□□□□□ -0.23
RDH11-210ENST00000557331 PRKAR2BP31323 418 aa13.62□□□□□ -0.23
RDH11-210ENST00000557331 EIF6P56537 245 aaKnown RBP13.62□□□□□ -0.23
RDH11-210ENST00000557331 BEGAINQ9BUH8 593 aa13.62□□□□□ -0.23
RDH11-210ENST00000557331 TMX4Q9H1E5 349 aaPredicted RBP13.62□□□□□ -0.23
RDH11-210ENST00000557331 ZNF277Q9NRM2 450 aaPredicted RBP13.62□□□□□ -0.23
RDH11-210ENST00000557331 SIPA1L3O60292 1781 aaPredicted RBP13.62□□□□□ -0.23
RDH11-210ENST00000557331 NEFMP07197 916 aa13.61□□□□□ -0.23
RDH11-210ENST00000557331 ECE1P42892 770 aa13.61□□□□□ -0.23
RDH11-210ENST00000557331 SYNE4Q8N205 404 aa13.61□□□□□ -0.23
RDH11-210ENST00000557331 PNISRQ8TF01 805 aaKnown RBP13.61□□□□□ -0.23
RDH11-210ENST00000557331 RSPH6AQ9H0K4 717 aa13.61□□□□□ -0.23
RDH11-210ENST00000557331 VPS33BQ9H267 617 aa13.61□□□□□ -0.23
RDH11-210ENST00000557331 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
RDH11-210ENST00000557331 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
RDH11-210ENST00000557331 CRY2Q49AN0 593 aa13.6□□□□□ -0.23
RDH11-210ENST00000557331 PHACTR3Q96KR7 559 aa13.6□□□□□ -0.23
RDH11-210ENST00000557331 BCORQ6W2J9 1755 aa13.59□□□□□ -0.23
RDH11-210ENST00000557331 KCNQ3O43525 872 aa13.59□□□□□ -0.23
RDH11-210ENST00000557331 HOXA10P31260 410 aaPredicted RBP13.59□□□□□ -0.23
RDH11-210ENST00000557331 WDR33Q9C0J8 1336 aaKnown RBP13.59□□□□□ -0.23
RDH11-210ENST00000557331 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
RDH11-210ENST00000557331 LBX1P52954 281 aa13.58□□□□□ -0.24
RDH11-210ENST00000557331 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
RDH11-210ENST00000557331 USP50Q70EL3 339 aaPredicted RBP13.58□□□□□ -0.24
RDH11-210ENST00000557331 RPGRQ92834 1020 aaKnown RBP13.58□□□□□ -0.24
RDH11-210ENST00000557331 ABT1Q9ULW3 272 aaKnown RBP13.58□□□□□ -0.24
RDH11-210ENST00000557331 ZNF541Q9H0D2 1346 aa13.58□□□□□ -0.24
RDH11-210ENST00000557331 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
RDH11-210ENST00000557331 NBPF26B4DH59 902 aa13.57□□□□□ -0.24
RDH11-210ENST00000557331 CA12O43570 354 aa13.57□□□□□ -0.24
RDH11-210ENST00000557331 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
RDH11-210ENST00000557331 KIF6Q6ZMV9 814 aa13.57□□□□□ -0.24
RDH11-210ENST00000557331 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
RDH11-210ENST00000557331 RBM17Q96I25 401 aaKnown RBP13.57□□□□□ -0.24
RDH11-210ENST00000557331 CRAMP1Q96RY5 1269 aa13.57□□□□□ -0.24
RDH11-210ENST00000557331 DDX21Q9NR30 783 aaKnown RBP eCLIP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms