RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 TSEN2Q8NCE0 465 aaKnown RBP8.55□□□□□ -1.04
FOXN3-215ENST00000557261 HINFPQ9BQA5 517 aa8.55□□□□□ -1.04
FOXN3-215ENST00000557261 NUDT12Q9BQG2 462 aa8.55□□□□□ -1.04
FOXN3-215ENST00000557261 DCTN4Q9UJW0 460 aa8.55□□□□□ -1.04
FOXN3-215ENST00000557261 SALL2Q9Y467 1007 aaPredicted RBP8.55□□□□□ -1.04
FOXN3-215ENST00000557261 TSPOAP1O95153 1857 aa8.55□□□□□ -1.04
FOXN3-215ENST00000557261 SCAPERQ9BY12 1400 aa8.54□□□□□ -1.04
FOXN3-215ENST00000557261 SMARCA5O60264 1052 aaPredicted RBP8.54□□□□□ -1.04
FOXN3-215ENST00000557261 DXOO77932 396 aaKnown RBP8.54□□□□□ -1.04
FOXN3-215ENST00000557261 PSME1Q06323 249 aa8.54□□□□□ -1.04
FOXN3-215ENST00000557261 SH3BP5LQ7L8J4 393 aa8.54□□□□□ -1.04
FOXN3-215ENST00000557261 BACH2Q9BYV9 841 aa8.54□□□□□ -1.04
FOXN3-215ENST00000557261 ABCA6Q8N139 1617 aa8.54□□□□□ -1.04
FOXN3-215ENST00000557261 TET3O43151 1660 aa8.53□□□□□ -1.04
FOXN3-215ENST00000557261 ZC3H13Q5T200 1668 aaKnown RBP8.53□□□□□ -1.04
FOXN3-215ENST00000557261 P4HBP07237 508 aaKnown RBP8.53□□□□□ -1.04
FOXN3-215ENST00000557261 HMGB1P09429 215 aaKnown RBP8.53□□□□□ -1.04
FOXN3-215ENST00000557261 GGCXP38435 758 aa8.53□□□□□ -1.04
FOXN3-215ENST00000557261 HNRNPMP52272 730 aaKnown RBP eCLIP8.53□□□□□ -1.04
FOXN3-215ENST00000557261 ZC3H6P61129 1189 aaKnown RBP8.53□□□□□ -1.04
FOXN3-215ENST00000557261 HDLBPQ00341 1268 aaKnown RBP8.53□□□□□ -1.04
FOXN3-215ENST00000557261 ZBTB33Q86T24 672 aa8.53□□□□□ -1.04
FOXN3-215ENST00000557261 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
FOXN3-215ENST00000557261 RRP7BPQ9NSQ0 103 aa8.53□□□□□ -1.04
FOXN3-215ENST00000557261 MROH1Q8NDA8 1641 aa8.53□□□□□ -1.04
FOXN3-215ENST00000557261 DIP2CQ9Y2E4 1556 aa8.52□□□□□ -1.04
FOXN3-215ENST00000557261 ATP10AO60312 1499 aa8.52□□□□□ -1.05
FOXN3-215ENST00000557261 MAGEB6P1A0A0J9YX57 407 aa8.52□□□□□ -1.05
FOXN3-215ENST00000557261 WEE1P30291 646 aa8.52□□□□□ -1.05
FOXN3-215ENST00000557261 FAM161BQ96MY7 647 aa8.52□□□□□ -1.05
FOXN3-215ENST00000557261 LMTK2Q8IWU2 1503 aa8.52□□□□□ -1.05
FOXN3-215ENST00000557261 SPAG9O60271 1321 aaKnown RBP8.52□□□□□ -1.05
FOXN3-215ENST00000557261 MCCD1P59942 119 aaPredicted RBP8.51□□□□□ -1.05
FOXN3-215ENST00000557261 FKBP4Q02790 459 aaKnown RBP eCLIP8.51□□□□□ -1.05
FOXN3-215ENST00000557261 NBPF14Q5TI25 921 aa8.51□□□□□ -1.05
FOXN3-215ENST00000557261 V9GY48 417 aaPredicted RBP8.51□□□□□ -1.05
FOXN3-215ENST00000557261 NEURL4Q96JN8 1562 aa8.51□□□□□ -1.05
FOXN3-215ENST00000557261 RPRD2Q5VT52 1461 aaKnown RBP8.51□□□□□ -1.05
FOXN3-215ENST00000557261 GFRA3O60609 400 aa8.5□□□□□ -1.05
FOXN3-215ENST00000557261 STAU1O95793 577 aaKnown RBP8.5□□□□□ -1.05
FOXN3-215ENST00000557261 ERCC5P28715 1186 aaPredicted RBP8.5□□□□□ -1.05
FOXN3-215ENST00000557261 MRPL58Q14197 206 aaKnown RBP8.5□□□□□ -1.05
FOXN3-215ENST00000557261 LAPTM4AQ15012 233 aa8.5□□□□□ -1.05
FOXN3-215ENST00000557261 EAPPQ56P03 285 aaPredicted RBP8.5□□□□□ -1.05
FOXN3-215ENST00000557261 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
FOXN3-215ENST00000557261 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.5□□□□□ -1.05
FOXN3-215ENST00000557261 ARMC2Q8NEN0 867 aa8.5□□□□□ -1.05
FOXN3-215ENST00000557261 FBXO41Q8TF61 875 aa8.5□□□□□ -1.05
FOXN3-215ENST00000557261 GPKOWQ92917 476 aaPredicted RBP eCLIP8.5□□□□□ -1.05
FOXN3-215ENST00000557261 UNC93B1Q9H1C4 597 aa8.5□□□□□ -1.05
FOXN3-215ENST00000557261 ARHGEF40Q8TER5 1519 aa8.49□□□□□ -1.05
FOXN3-215ENST00000557261 ANKRD30BQ9BXX2 1392 aa8.49□□□□□ -1.05
FOXN3-215ENST00000557261 NR1I2O75469 434 aa8.49□□□□□ -1.05
FOXN3-215ENST00000557261 MMP16P51512 607 aa8.49□□□□□ -1.05
FOXN3-215ENST00000557261 TMC7Q7Z402 723 aa8.49□□□□□ -1.05
FOXN3-215ENST00000557261 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
FOXN3-215ENST00000557261 A2MP01023 1474 aa8.49□□□□□ -1.05
FOXN3-215ENST00000557261 SPHKAPQ2M3C7 1700 aa8.49□□□□□ -1.05
FOXN3-215ENST00000557261 DHX29Q7Z478 1369 aaKnown RBP8.48□□□□□ -1.05
FOXN3-215ENST00000557261 MSS51Q4VC12 460 aa8.48□□□□□ -1.05
FOXN3-215ENST00000557261 ZSCAN29Q8IWY8 852 aaPredicted RBP8.48□□□□□ -1.05
FOXN3-215ENST00000557261 RGL4Q8IZJ4 473 aa8.48□□□□□ -1.05
FOXN3-215ENST00000557261 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
FOXN3-215ENST00000557261 SETDB2Q96T68 719 aa8.48□□□□□ -1.05
FOXN3-215ENST00000557261 MPHOSPH9Q99550 1183 aa8.48□□□□□ -1.05
FOXN3-215ENST00000557261 RBM19Q9Y4C8 960 aaKnown RBP8.48□□□□□ -1.05
FOXN3-215ENST00000557261 PCDHB11Q9Y5F2 797 aa8.48□□□□□ -1.05
FOXN3-215ENST00000557261 E9PCH4 1651 aa8.48□□□□□ -1.05
FOXN3-215ENST00000557261 AGLP35573 1532 aa8.48□□□□□ -1.05
FOXN3-215ENST00000557261 EFCAB6Q5THR3 1501 aa8.48□□□□□ -1.05
FOXN3-215ENST00000557261 RAD51AP2Q09MP3 1159 aa8.47□□□□□ -1.05
FOXN3-215ENST00000557261 LINC01559Q495D7 138 aa8.47□□□□□ -1.05
FOXN3-215ENST00000557261 ERFEQ4G0M1 354 aa8.47□□□□□ -1.05
FOXN3-215ENST00000557261 SPSB2Q99619 263 aa8.47□□□□□ -1.05
FOXN3-215ENST00000557261 SAP130Q9H0E3 1048 aa8.47□□□□□ -1.05
FOXN3-215ENST00000557261 TRPM2O94759 1503 aa8.47□□□□□ -1.05
FOXN3-215ENST00000557261 NUP155O75694 1391 aa8.47□□□□□ -1.05
FOXN3-215ENST00000557261 CEP152O94986 1710 aa8.46□□□□□ -1.05
FOXN3-215ENST00000557261 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
FOXN3-215ENST00000557261 SF3B2Q13435 895 aaKnown RBP8.46□□□□□ -1.06
FOXN3-215ENST00000557261 SH3RF1Q7Z6J0 888 aa8.46□□□□□ -1.06
FOXN3-215ENST00000557261 ZNF592Q92610 1267 aa8.46□□□□□ -1.06
FOXN3-215ENST00000557261 NRG2O14511 850 aaPredicted RBP8.45□□□□□ -1.06
FOXN3-215ENST00000557261 LCE2BO14633 110 aa8.45□□□□□ -1.06
FOXN3-215ENST00000557261 S1PR4O95977 384 aa8.45□□□□□ -1.06
FOXN3-215ENST00000557261 MPSTP25325 297 aa8.45□□□□□ -1.06
FOXN3-215ENST00000557261 SCTRP47872 440 aa8.45□□□□□ -1.06
FOXN3-215ENST00000557261 RAB15P59190 212 aa8.45□□□□□ -1.06
FOXN3-215ENST00000557261 AFAP1Q8N556 730 aa8.45□□□□□ -1.06
FOXN3-215ENST00000557261 HELQQ8TDG4 1101 aa8.45□□□□□ -1.06
FOXN3-215ENST00000557261 BAP1Q92560 729 aa8.45□□□□□ -1.06
FOXN3-215ENST00000557261 ZNF358Q9NW07 568 aa8.45□□□□□ -1.06
FOXN3-215ENST00000557261 WWC3Q9ULE0 1092 aa8.45□□□□□ -1.06
FOXN3-215ENST00000557261 CAMSAP1Q5T5Y3 1602 aa8.44□□□□□ -1.06
FOXN3-215ENST00000557261 ADH1BP00325 375 aa8.44□□□□□ -1.06
FOXN3-215ENST00000557261 PIK3R5Q8WYR1 880 aa8.44□□□□□ -1.06
FOXN3-215ENST00000557261 UBXN4Q92575 508 aa8.44□□□□□ -1.06
FOXN3-215ENST00000557261 TRIM52Q96A61 297 aa8.44□□□□□ -1.06
FOXN3-215ENST00000557261 SPATA32Q96LK8 384 aa8.44□□□□□ -1.06
FOXN3-215ENST00000557261 KANK1Q14678 1352 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms