RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-208	ENST00000556956	LRRN4	Q8WUT4	740 aa		4.66	□□□□□ -1.66
SLIRP-208	ENST00000556956	ESYT1	Q9BSJ8	1104 aa		4.66	□□□□□ -1.66
SLIRP-208	ENST00000556956	JAG2	Q9Y219	1238 aa		4.66	□□□□□ -1.66
SLIRP-208	ENST00000556956	HRH3	Q9Y5N1	445 aa		4.66	□□□□□ -1.66
SLIRP-208	ENST00000556956	DBX1	A6NMT0	343 aa		4.65	□□□□□ -1.67
SLIRP-208	ENST00000556956	USP17L8	P0C7I0	530 aa		4.65	□□□□□ -1.67
SLIRP-208	ENST00000556956	ATP4A	P20648	1035 aa		4.65	□□□□□ -1.67
SLIRP-208	ENST00000556956	ZIC5	Q96T25	663 aa		4.65	□□□□□ -1.67
SLIRP-208	ENST00000556956	FHDC1	Q9C0D6	1143 aa	Predicted RBP	4.65	□□□□□ -1.67
SLIRP-208	ENST00000556956	OSBPL3	Q9H4L5	887 aa		4.65	□□□□□ -1.67
SLIRP-208	ENST00000556956	SOCS7	O14512	581 aa		4.64	□□□□□ -1.67
SLIRP-208	ENST00000556956	TRAK2	O60296	914 aa		4.64	□□□□□ -1.67
SLIRP-208	ENST00000556956	GIGYF1	O75420	1035 aa	Predicted RBP	4.64	□□□□□ -1.67
SLIRP-208	ENST00000556956	MCCD1	P59942	119 aa	Predicted RBP	4.64	□□□□□ -1.67
SLIRP-208	ENST00000556956	RAC1	P63000	192 aa		4.64	□□□□□ -1.67
SLIRP-208	ENST00000556956	ZNF648	Q5T619	568 aa	Predicted RBP	4.64	□□□□□ -1.67
SLIRP-208	ENST00000556956	TMEM214	Q6NUQ4	689 aa	Known RBP	4.64	□□□□□ -1.67
SLIRP-208	ENST00000556956	NLRP8	Q86W28	1048 aa		4.64	□□□□□ -1.67
SLIRP-208	ENST00000556956	CCDC125	Q86Z20	511 aa		4.64	□□□□□ -1.67
SLIRP-208	ENST00000556956	ZNF330	Q9Y3S2	320 aa	Predicted RBP	4.64	□□□□□ -1.67
SLIRP-208	ENST00000556956		B8ZZF3	427 aa		4.63	□□□□□ -1.67
SLIRP-208	ENST00000556956	ABI1	Q8IZP0	508 aa		4.63	□□□□□ -1.67
SLIRP-208	ENST00000556956	SIN3B	O75182	1162 aa		4.62	□□□□□ -1.67
SLIRP-208	ENST00000556956	WNT11	O96014	354 aa		4.62	□□□□□ -1.67
SLIRP-208	ENST00000556956	LILRA6	Q6PI73	481 aa		4.62	□□□□□ -1.67
SLIRP-208	ENST00000556956	FMR1NB	Q8N0W7	255 aa	Predicted RBP	4.62	□□□□□ -1.67
SLIRP-208	ENST00000556956	FBXO31	Q5XUX0	539 aa	Predicted RBP	4.61	□□□□□ -1.67
SLIRP-208	ENST00000556956	DTX1	Q86Y01	620 aa		4.61	□□□□□ -1.67
SLIRP-208	ENST00000556956	MARK1	Q9P0L2	795 aa		4.61	□□□□□ -1.67
SLIRP-208	ENST00000556956		A0A1W2PNR3	127 aa		4.6	□□□□□ -1.67
SLIRP-208	ENST00000556956	ZBBX	A8MT70	800 aa		4.6	□□□□□ -1.67
SLIRP-208	ENST00000556956	FAM157B	P0CG42	384 aa		4.6	□□□□□ -1.67
SLIRP-208	ENST00000556956	ADH7	P40394	386 aa		4.6	□□□□□ -1.67
SLIRP-208	ENST00000556956	TBC1D9	Q6ZT07	1266 aa		4.6	□□□□□ -1.67
SLIRP-208	ENST00000556956	TNFRSF25	Q93038	417 aa		4.6	□□□□□ -1.67
SLIRP-208	ENST00000556956	SUPT5H	O00267	1087 aa	Known RBP	4.59	□□□□□ -1.67
SLIRP-208	ENST00000556956	LILRB5	O75023	590 aa		4.59	□□□□□ -1.67
SLIRP-208	ENST00000556956	PLA2G4A	P47712	749 aa		4.59	□□□□□ -1.67
SLIRP-208	ENST00000556956	RNF20	Q5VTR2	975 aa		4.59	□□□□□ -1.67
SLIRP-208	ENST00000556956	EPS8L1	Q8TE68	723 aa		4.59	□□□□□ -1.67
SLIRP-208	ENST00000556956	RHBDD1	Q8TEB9	315 aa		4.59	□□□□□ -1.67
SLIRP-208	ENST00000556956	ASIC4	Q96FT7	647 aa		4.59	□□□□□ -1.67
SLIRP-208	ENST00000556956	HMX1	Q9NP08	348 aa	Predicted RBP	4.59	□□□□□ -1.67
SLIRP-208	ENST00000556956	NDUFB9	Q9Y6M9	179 aa		4.59	□□□□□ -1.67
SLIRP-208	ENST00000556956	EFS	O43281	561 aa		4.58	□□□□□ -1.68
SLIRP-208	ENST00000556956	GNRH1	P01148	92 aa		4.58	□□□□□ -1.68
SLIRP-208	ENST00000556956	IGLV1-40	P01703	118 aa		4.58	□□□□□ -1.68
SLIRP-208	ENST00000556956	PRKCSH	P14314	528 aa	Predicted RBP	4.58	□□□□□ -1.68
SLIRP-208	ENST00000556956	GTF2E1	P29083	439 aa	Predicted RBP	4.58	□□□□□ -1.68
SLIRP-208	ENST00000556956	ILDR2	Q71H61	639 aa		4.58	□□□□□ -1.68
SLIRP-208	ENST00000556956	ZDHHC13	Q8IUH4	622 aa		4.58	□□□□□ -1.68
SLIRP-208	ENST00000556956	XAGE2	Q96GT9	111 aa		4.58	□□□□□ -1.68
SLIRP-208	ENST00000556956	TRIM34	Q9BYJ4	488 aa		4.58	□□□□□ -1.68
SLIRP-208	ENST00000556956	ESF1	Q9H501	851 aa	Known RBP	4.58	□□□□□ -1.68
SLIRP-208	ENST00000556956	NR1H3	Q13133	447 aa		4.57	□□□□□ -1.68
SLIRP-208	ENST00000556956	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.57	□□□□□ -1.68
SLIRP-208	ENST00000556956	DZIP1L	Q8IYY4	767 aa	Known RBP	4.57	□□□□□ -1.68
SLIRP-208	ENST00000556956	GJD4	Q96KN9	370 aa	Predicted RBP	4.57	□□□□□ -1.68
SLIRP-208	ENST00000556956	PCGF6	Q9BYE7	350 aa		4.57	□□□□□ -1.68
SLIRP-208	ENST00000556956	CBLL1	Q75N03	491 aa		4.56	□□□□□ -1.68
SLIRP-208	ENST00000556956	PPARGC1B	Q86YN6	1023 aa	Known RBP	4.56	□□□□□ -1.68
SLIRP-208	ENST00000556956	WWC1	Q8IX03	1113 aa		4.56	□□□□□ -1.68
SLIRP-208	ENST00000556956	SLC30A3	Q99726	388 aa		4.56	□□□□□ -1.68
SLIRP-208	ENST00000556956	PCDHB9	Q9Y5E1	797 aa		4.56	□□□□□ -1.68
SLIRP-208	ENST00000556956	SHROOM4	Q9ULL8	1493 aa		4.56	□□□□□ -1.68
SLIRP-208	ENST00000556956	PTCD1	O75127	700 aa	Known RBP	4.55	□□□□□ -1.68
SLIRP-208	ENST00000556956	ITGB5	P18084	799 aa		4.55	□□□□□ -1.68
SLIRP-208	ENST00000556956	ZEB1	P37275	1124 aa	Predicted RBP	4.55	□□□□□ -1.68
SLIRP-208	ENST00000556956	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
SLIRP-208	ENST00000556956	ARSJ	Q5FYB0	599 aa	Predicted RBP	4.55	□□□□□ -1.68
SLIRP-208	ENST00000556956	INTS5	Q6P9B9	1019 aa	Known RBP	4.55	□□□□□ -1.68
SLIRP-208	ENST00000556956	FBXO45	P0C2W1	286 aa		4.54	□□□□□ -1.68
SLIRP-208	ENST00000556956	WASHC4	Q2M389	1173 aa		4.54	□□□□□ -1.68
SLIRP-208	ENST00000556956	MTMR14	Q8NCE2	650 aa		4.54	□□□□□ -1.68
SLIRP-208	ENST00000556956	C1orf216	Q8TAB5	229 aa		4.54	□□□□□ -1.68
SLIRP-208	ENST00000556956	AIDA	Q96BJ3	306 aa		4.54	□□□□□ -1.68
SLIRP-208	ENST00000556956	JPH1	Q9HDC5	661 aa	Predicted RBP	4.54	□□□□□ -1.68
SLIRP-208	ENST00000556956	SNRK	Q9NRH2	765 aa		4.54	□□□□□ -1.68
SLIRP-208	ENST00000556956	PRR19	A6NJB7	356 aa		4.53	□□□□□ -1.68
SLIRP-208	ENST00000556956	ALX3	O95076	343 aa		4.53	□□□□□ -1.68
SLIRP-208	ENST00000556956	STAU1	O95793	577 aa	Known RBP	4.53	□□□□□ -1.68
SLIRP-208	ENST00000556956	GRIK1	P39086	918 aa		4.53	□□□□□ -1.68
SLIRP-208	ENST00000556956	AFF1	P51825	1210 aa	Known RBP	4.53	□□□□□ -1.68
SLIRP-208	ENST00000556956	RAB44	Q7Z6P3	723 aa	Predicted RBP	4.53	□□□□□ -1.68
SLIRP-208	ENST00000556956	NUDT8	Q8WV74	236 aa		4.53	□□□□□ -1.68
SLIRP-208	ENST00000556956	PCDHB11	Q9Y5F2	797 aa		4.53	□□□□□ -1.68
SLIRP-208	ENST00000556956	GSC2	O15499	205 aa		4.52	□□□□□ -1.69
SLIRP-208	ENST00000556956	RAD21	O60216	631 aa		4.52	□□□□□ -1.69
SLIRP-208	ENST00000556956	FLII	Q13045	1269 aa		4.52	□□□□□ -1.69
SLIRP-208	ENST00000556956	RAX	Q9Y2V3	346 aa		4.52	□□□□□ -1.69
SLIRP-208	ENST00000556956	SOX11	P35716	441 aa		4.51	□□□□□ -1.69
SLIRP-208	ENST00000556956	TRIM26	Q12899	539 aa	Predicted RBP	4.51	□□□□□ -1.69
SLIRP-208	ENST00000556956	TMEM132A	Q24JP5	1023 aa		4.51	□□□□□ -1.69
SLIRP-208	ENST00000556956	SAMD5	Q5TGI4	173 aa		4.51	□□□□□ -1.69
SLIRP-208	ENST00000556956	FBXO11	Q86XK2	927 aa		4.51	□□□□□ -1.69
SLIRP-208	ENST00000556956	SIRT1	Q96EB6	747 aa		4.51	□□□□□ -1.69
SLIRP-208	ENST00000556956	DCAF1	Q9Y4B6	1507 aa		4.51	□□□□□ -1.69
SLIRP-208	ENST00000556956	MYC	P01106	439 aa	Predicted RBP	4.5	□□□□□ -1.69
SLIRP-208	ENST00000556956	USP4	Q13107	963 aa		4.5	□□□□□ -1.69
SLIRP-208	ENST00000556956	COL19A1	Q14993	1142 aa		4.5	□□□□□ -1.69

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