RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 KLRG1Q96E93 195 aa19.76■□□□□ 0.75
CHD8-211ENST00000556833 NUDCQ9Y266 331 aa19.76■□□□□ 0.75
CHD8-211ENST00000556833 DLG5Q8TDM6 1919 aa19.76■□□□□ 0.75
CHD8-211ENST00000556833 ARFGEF2Q9Y6D5 1785 aa19.75■□□□□ 0.75
CHD8-211ENST00000556833 ST5P78524 1137 aa19.75■□□□□ 0.75
CHD8-211ENST00000556833 ZC3H4Q9UPT8 1303 aaKnown RBP19.75■□□□□ 0.75
CHD8-211ENST00000556833 VEGFAP15692 232 aaPredicted RBP19.74■□□□□ 0.75
CHD8-211ENST00000556833 ERFEQ4G0M1 354 aa19.74■□□□□ 0.75
CHD8-211ENST00000556833 MIS18AQ9NYP9 233 aa19.74■□□□□ 0.75
CHD8-211ENST00000556833 PRPF40BQ6NWY9 871 aaKnown RBP19.73■□□□□ 0.75
CHD8-211ENST00000556833 PCNTO95613 3336 aa19.73■□□□□ 0.75
CHD8-211ENST00000556833 NBPF5PQ86XG9 351 aaPredicted RBP19.72■□□□□ 0.75
CHD8-211ENST00000556833 LAMB4A4D0S4 1761 aa19.71■□□□□ 0.75
CHD8-211ENST00000556833 POTECB2RU33 542 aa19.71■□□□□ 0.75
CHD8-211ENST00000556833 TAOK3Q9H2K8 898 aa19.71■□□□□ 0.75
CHD8-211ENST00000556833 NBPF26B4DH59 902 aa19.7■□□□□ 0.74
CHD8-211ENST00000556833 SNRPA1P09661 255 aaKnown RBP19.7■□□□□ 0.74
CHD8-211ENST00000556833 SRGNP10124 158 aa19.7■□□□□ 0.74
CHD8-211ENST00000556833 NBPF10Q6P3W6 841 aaKnown RBP19.7■□□□□ 0.74
CHD8-211ENST00000556833 NGEFQ8N5V2 710 aa19.7■□□□□ 0.74
CHD8-211ENST00000556833 NBPF15Q8N660 670 aa19.7■□□□□ 0.74
CHD8-211ENST00000556833 DPY19L2Q6NUT2 758 aa19.69■□□□□ 0.74
CHD8-211ENST00000556833 OLFM4Q6UX06 510 aa19.69■□□□□ 0.74
CHD8-211ENST00000556833 CNKSR1Q969H4 720 aa19.69■□□□□ 0.74
CHD8-211ENST00000556833 DDNO94850 711 aaPredicted RBP19.68■□□□□ 0.74
CHD8-211ENST00000556833 POTEIP0CG38 1075 aa19.68■□□□□ 0.74
CHD8-211ENST00000556833 POTEJP0CG39 1038 aa19.68■□□□□ 0.74
CHD8-211ENST00000556833 STYK1Q6J9G0 422 aa19.68■□□□□ 0.74
CHD8-211ENST00000556833 MASTLQ96GX5 879 aa19.68■□□□□ 0.74
CHD8-211ENST00000556833 PDZRN3Q9UPQ7 1066 aa19.68■□□□□ 0.74
CHD8-211ENST00000556833 NIP7Q9Y221 180 aaKnown RBP eCLIP19.68■□□□□ 0.74
CHD8-211ENST00000556833 COL13A1Q5TAT6 717 aaPredicted RBP19.67■□□□□ 0.74
CHD8-211ENST00000556833 ZNF652Q9Y2D9 606 aa19.67■□□□□ 0.74
CHD8-211ENST00000556833 KDM3BQ7LBC6 1761 aa19.67■□□□□ 0.74
CHD8-211ENST00000556833 HLFQ16534 295 aa19.66■□□□□ 0.74
CHD8-211ENST00000556833 JMYQ8N9B5 988 aa19.66■□□□□ 0.74
CHD8-211ENST00000556833 THUMPD2Q9BTF0 503 aaKnown RBP19.66■□□□□ 0.74
CHD8-211ENST00000556833 NUP98P52948 1817 aa19.65■□□□□ 0.74
CHD8-211ENST00000556833 CAPN15O75808 1086 aa19.65■□□□□ 0.74
CHD8-211ENST00000556833 ZNF277Q9NRM2 450 aaPredicted RBP19.64■□□□□ 0.73
CHD8-211ENST00000556833 LTBP3Q9NS15 1303 aa19.64■□□□□ 0.73
CHD8-211ENST00000556833 TAF7Q15545 349 aaPredicted RBP19.63■□□□□ 0.73
CHD8-211ENST00000556833 CLEC4GQ6UXB4 293 aa19.63■□□□□ 0.73
CHD8-211ENST00000556833 NPR1P16066 1061 aa19.62■□□□□ 0.73
CHD8-211ENST00000556833 GTF2E1P29083 439 aaPredicted RBP19.62■□□□□ 0.73
CHD8-211ENST00000556833 CCDC93Q567U6 631 aa19.62■□□□□ 0.73
CHD8-211ENST00000556833 NUTM1Q86Y26 1132 aa19.62■□□□□ 0.73
CHD8-211ENST00000556833 RRP7AQ9Y3A4 280 aaKnown RBP19.62■□□□□ 0.73
CHD8-211ENST00000556833 ABCC12Q96J65 1359 aa19.61■□□□□ 0.73
CHD8-211ENST00000556833 ZNF541Q9H0D2 1346 aa19.61■□□□□ 0.73
CHD8-211ENST00000556833 MYL6BP14649 208 aa19.61■□□□□ 0.73
CHD8-211ENST00000556833 SOGA3Q5TF21 947 aa19.61■□□□□ 0.73
CHD8-211ENST00000556833 TPTE2Q6XPS3 522 aa19.61■□□□□ 0.73
CHD8-211ENST00000556833 HTATSF1O43719 755 aaKnown RBP19.6■□□□□ 0.73
CHD8-211ENST00000556833 NEFMP07197 916 aa19.6■□□□□ 0.73
CHD8-211ENST00000556833 HSPA1AP0DMV8 641 aaKnown RBP19.6■□□□□ 0.73
CHD8-211ENST00000556833 HSPA1BP0DMV9 641 aaKnown RBP19.6■□□□□ 0.73
CHD8-211ENST00000556833 GPTP24298 496 aa19.6■□□□□ 0.73
CHD8-211ENST00000556833 CHADLQ6NUI6 762 aa19.6■□□□□ 0.73
CHD8-211ENST00000556833 SLC51AQ86UW1 340 aa19.6■□□□□ 0.73
CHD8-211ENST00000556833 C7orf43Q8WVR3 580 aa19.6■□□□□ 0.73
CHD8-211ENST00000556833 MKRN1Q9UHC7 482 aaKnown RBP19.6■□□□□ 0.73
CHD8-211ENST00000556833 EAPPQ56P03 285 aaPredicted RBP19.59■□□□□ 0.73
CHD8-211ENST00000556833 TTLL7Q6ZT98 887 aa19.59■□□□□ 0.73
CHD8-211ENST00000556833 ZBTB3Q9H5J0 574 aa19.59■□□□□ 0.73
CHD8-211ENST00000556833 SCN4AP35499 1836 aa19.58■□□□□ 0.73
CHD8-211ENST00000556833 FKBP4Q02790 459 aaKnown RBP eCLIP19.58■□□□□ 0.72
CHD8-211ENST00000556833 TCERG1O14776 1098 aaKnown RBP19.57■□□□□ 0.72
CHD8-211ENST00000556833 NFE2L2Q16236 605 aa19.56■□□□□ 0.72
CHD8-211ENST00000556833 KIF6Q6ZMV9 814 aa19.56■□□□□ 0.72
CHD8-211ENST00000556833 TNS4Q8IZW8 715 aa19.56■□□□□ 0.72
CHD8-211ENST00000556833 MAP3K15Q6ZN16 1313 aa19.55■□□□□ 0.72
CHD8-211ENST00000556833 MAPK8IP3Q9UPT6 1336 aa19.55■□□□□ 0.72
CHD8-211ENST00000556833 EIF4A1P60842 406 aaKnown RBP19.55■□□□□ 0.72
CHD8-211ENST00000556833 SYNE4Q8N205 404 aa19.55■□□□□ 0.72
CHD8-211ENST00000556833 PLEKHF1Q96S99 279 aa19.55■□□□□ 0.72
CHD8-211ENST00000556833 TAF1DQ9H5J8 278 aaPredicted RBP19.55■□□□□ 0.72
CHD8-211ENST00000556833 RNF123Q5XPI4 1314 aa19.54■□□□□ 0.72
CHD8-211ENST00000556833 UBN2Q6ZU65 1347 aa19.54■□□□□ 0.72
CHD8-211ENST00000556833 KLRG2A4D1S0 409 aaPredicted RBP19.54■□□□□ 0.72
CHD8-211ENST00000556833 IARSP41252 1262 aaKnown RBP19.54■□□□□ 0.72
CHD8-211ENST00000556833 CLEC11AQ9Y240 323 aa19.54■□□□□ 0.72
CHD8-211ENST00000556833 COL4A5P29400 1685 aa19.53■□□□□ 0.72
CHD8-211ENST00000556833 IQCA1LA6NCM1 817 aa19.53■□□□□ 0.72
CHD8-211ENST00000556833 PNISRQ8TF01 805 aaKnown RBP19.53■□□□□ 0.72
CHD8-211ENST00000556833 ANXA1P04083 346 aa19.52■□□□□ 0.72
CHD8-211ENST00000556833 SUSD4Q5VX71 490 aa19.52■□□□□ 0.72
CHD8-211ENST00000556833 LDHDQ86WU2 507 aa19.52■□□□□ 0.72
CHD8-211ENST00000556833 RTKN2Q8IZC4 609 aa19.52■□□□□ 0.72
CHD8-211ENST00000556833 RPGRQ92834 1020 aaKnown RBP19.52■□□□□ 0.72
CHD8-211ENST00000556833 NYXQ9GZU5 481 aa19.52■□□□□ 0.72
CHD8-211ENST00000556833 CREBZFQ9NS37 354 aa19.52■□□□□ 0.72
CHD8-211ENST00000556833 EIF2S2P20042 333 aaKnown RBP19.51■□□□□ 0.71
CHD8-211ENST00000556833 ALDH1B1P30837 517 aa19.51■□□□□ 0.71
CHD8-211ENST00000556833 C3orf67Q6ZVT6 689 aa19.51■□□□□ 0.71
CHD8-211ENST00000556833 NECTIN2Q92692 538 aa19.51■□□□□ 0.71
CHD8-211ENST00000556833 ZNF428Q96B54 188 aa19.51■□□□□ 0.71
CHD8-211ENST00000556833 L3MBTL3Q96JM7 780 aaPredicted RBP19.51■□□□□ 0.71
CHD8-211ENST00000556833 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
CHD8-211ENST00000556833 HACL1Q9UJ83 578 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms