RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 ST5P78524 1137 aa11.92□□□□□ -0.5
LINC00520-204ENST00000556417 U2AF1Q01081 240 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00520-204ENST00000556417 DCTN1Q14203 1278 aa11.92□□□□□ -0.5
LINC00520-204ENST00000556417 STYK1Q6J9G0 422 aa11.92□□□□□ -0.5
LINC00520-204ENST00000556417 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
LINC00520-204ENST00000556417 CNKSR1Q969H4 720 aa11.92□□□□□ -0.5
LINC00520-204ENST00000556417 SIPA1L3O60292 1781 aaPredicted RBP11.92□□□□□ -0.5
LINC00520-204ENST00000556417 LTBP3Q9NS15 1303 aa11.91□□□□□ -0.5
LINC00520-204ENST00000556417 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
LINC00520-204ENST00000556417 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
LINC00520-204ENST00000556417 NPHP1O15259 732 aa11.91□□□□□ -0.5
LINC00520-204ENST00000556417 COL13A1Q5TAT6 717 aaPredicted RBP11.91□□□□□ -0.5
LINC00520-204ENST00000556417 PRPF40BQ6NWY9 871 aaKnown RBP11.91□□□□□ -0.5
LINC00520-204ENST00000556417 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
LINC00520-204ENST00000556417 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
LINC00520-204ENST00000556417 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
LINC00520-204ENST00000556417 MASTLQ96GX5 879 aa11.91□□□□□ -0.5
LINC00520-204ENST00000556417 TAOK3Q9H2K8 898 aa11.91□□□□□ -0.5
LINC00520-204ENST00000556417 KLRG2A4D1S0 409 aaPredicted RBP11.9□□□□□ -0.5
LINC00520-204ENST00000556417 HTATSF1O43719 755 aaKnown RBP11.9□□□□□ -0.5
LINC00520-204ENST00000556417 NBPF5PQ86XG9 351 aaPredicted RBP11.9□□□□□ -0.5
LINC00520-204ENST00000556417 ANKRD31Q8N7Z5 1873 aa11.9□□□□□ -0.5
LINC00520-204ENST00000556417 C7orf43Q8WVR3 580 aa11.9□□□□□ -0.5
LINC00520-204ENST00000556417 DDNO94850 711 aaPredicted RBP11.89□□□□□ -0.51
LINC00520-204ENST00000556417 MIS18AQ9NYP9 233 aa11.89□□□□□ -0.51
LINC00520-204ENST00000556417 COL11A2P13942 1736 aaPredicted RBP11.89□□□□□ -0.51
LINC00520-204ENST00000556417 RGL2O15211 777 aa11.88□□□□□ -0.51
LINC00520-204ENST00000556417 POTEIP0CG38 1075 aa11.88□□□□□ -0.51
LINC00520-204ENST00000556417 POTEJP0CG39 1038 aa11.88□□□□□ -0.51
LINC00520-204ENST00000556417 TAF7Q15545 349 aaPredicted RBP11.88□□□□□ -0.51
LINC00520-204ENST00000556417 SOGA3Q5TF21 947 aa11.88□□□□□ -0.51
LINC00520-204ENST00000556417 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
LINC00520-204ENST00000556417 ZNF652Q9Y2D9 606 aa11.88□□□□□ -0.51
LINC00520-204ENST00000556417 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
LINC00520-204ENST00000556417 NPR1P16066 1061 aa11.87□□□□□ -0.51
LINC00520-204ENST00000556417 HLFQ16534 295 aa11.87□□□□□ -0.51
LINC00520-204ENST00000556417 NIP7Q9Y221 180 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC00520-204ENST00000556417 CCDC93Q567U6 631 aa11.86□□□□□ -0.51
LINC00520-204ENST00000556417 CHADLQ6NUI6 762 aa11.86□□□□□ -0.51
LINC00520-204ENST00000556417 OLFM4Q6UX06 510 aa11.86□□□□□ -0.51
LINC00520-204ENST00000556417 FER1L6Q2WGJ9 1857 aa11.86□□□□□ -0.51
LINC00520-204ENST00000556417 BCORQ6W2J9 1755 aa11.85□□□□□ -0.51
LINC00520-204ENST00000556417 FAM177BA6PVY3 158 aa11.85□□□□□ -0.51
LINC00520-204ENST00000556417 SLX4Q8IY92 1834 aa11.85□□□□□ -0.51
LINC00520-204ENST00000556417 HSPA1AP0DMV8 641 aaKnown RBP11.84□□□□□ -0.51
LINC00520-204ENST00000556417 HSPA1BP0DMV9 641 aaKnown RBP11.84□□□□□ -0.51
LINC00520-204ENST00000556417 ALDH1B1P30837 517 aa11.84□□□□□ -0.51
LINC00520-204ENST00000556417 FKBP4Q02790 459 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00520-204ENST00000556417 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
LINC00520-204ENST00000556417 PLEKHF1Q96S99 279 aa11.84□□□□□ -0.51
LINC00520-204ENST00000556417 ZNF277Q9NRM2 450 aaPredicted RBP11.84□□□□□ -0.51
LINC00520-204ENST00000556417 CREBZFQ9NS37 354 aa11.84□□□□□ -0.51
LINC00520-204ENST00000556417 CCDC88AQ3V6T2 1871 aa11.83□□□□□ -0.52
LINC00520-204ENST00000556417 IQCA1LA6NCM1 817 aa11.83□□□□□ -0.52
LINC00520-204ENST00000556417 ERVV-1B6SEH8 477 aa11.83□□□□□ -0.52
LINC00520-204ENST00000556417 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.52
LINC00520-204ENST00000556417 RTKN2Q8IZC4 609 aa11.83□□□□□ -0.52
LINC00520-204ENST00000556417 NGEFQ8N5V2 710 aa11.83□□□□□ -0.52
LINC00520-204ENST00000556417 TAF1DQ9H5J8 278 aaPredicted RBP11.83□□□□□ -0.52
LINC00520-204ENST00000556417 GTF2E1P29083 439 aaPredicted RBP11.82□□□□□ -0.52
LINC00520-204ENST00000556417 CRY2Q49AN0 593 aa11.82□□□□□ -0.52
LINC00520-204ENST00000556417 TTLL7Q6ZT98 887 aa11.82□□□□□ -0.52
LINC00520-204ENST00000556417 LDHDQ86WU2 507 aa11.82□□□□□ -0.52
LINC00520-204ENST00000556417 NUTM1Q86Y26 1132 aa11.82□□□□□ -0.52
LINC00520-204ENST00000556417 TNS4Q8IZW8 715 aa11.82□□□□□ -0.52
LINC00520-204ENST00000556417 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
LINC00520-204ENST00000556417 PASKQ96RG2 1323 aa11.82□□□□□ -0.52
LINC00520-204ENST00000556417 ZNF541Q9H0D2 1346 aa11.82□□□□□ -0.52
LINC00520-204ENST00000556417 FZD9O00144 591 aa11.81□□□□□ -0.52
LINC00520-204ENST00000556417 ITGBL1O95965 494 aaPredicted RBP11.81□□□□□ -0.52
LINC00520-204ENST00000556417 SYNE4Q8N205 404 aa11.81□□□□□ -0.52
LINC00520-204ENST00000556417 THUMPD2Q9BTF0 503 aaKnown RBP11.81□□□□□ -0.52
LINC00520-204ENST00000556417 NYXQ9GZU5 481 aa11.81□□□□□ -0.52
LINC00520-204ENST00000556417 MKRN1Q9UHC7 482 aaKnown RBP11.81□□□□□ -0.52
LINC00520-204ENST00000556417 RRP7AQ9Y3A4 280 aaKnown RBP11.81□□□□□ -0.52
LINC00520-204ENST00000556417 DICER1Q9UPY3 1922 aaKnown RBP11.81□□□□□ -0.52
LINC00520-204ENST00000556417 MAP3K15Q6ZN16 1313 aa11.81□□□□□ -0.52
LINC00520-204ENST00000556417 SNED1Q8TER0 1413 aa11.8□□□□□ -0.52
LINC00520-204ENST00000556417 NEFMP07197 916 aa11.8□□□□□ -0.52
LINC00520-204ENST00000556417 MYL6BP14649 208 aa11.8□□□□□ -0.52
LINC00520-204ENST00000556417 IARSP41252 1262 aaKnown RBP11.8□□□□□ -0.52
LINC00520-204ENST00000556417 NFE2L2Q16236 605 aa11.8□□□□□ -0.52
LINC00520-204ENST00000556417 PSMD1Q99460 953 aa11.8□□□□□ -0.52
LINC00520-204ENST00000556417 HACL1Q9UJ83 578 aa11.8□□□□□ -0.52
LINC00520-204ENST00000556417 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
LINC00520-204ENST00000556417 ABCC12Q96J65 1359 aa11.79□□□□□ -0.52
LINC00520-204ENST00000556417 ARFGEF2Q9Y6D5 1785 aa11.79□□□□□ -0.52
LINC00520-204ENST00000556417 CAPN15O75808 1086 aa11.79□□□□□ -0.52
LINC00520-204ENST00000556417 HOXA10P31260 410 aaPredicted RBP11.79□□□□□ -0.52
LINC00520-204ENST00000556417 EPHX2P34913 555 aa11.79□□□□□ -0.52
LINC00520-204ENST00000556417 EAPPQ56P03 285 aaPredicted RBP11.79□□□□□ -0.52
LINC00520-204ENST00000556417 SUSD4Q5VX71 490 aa11.79□□□□□ -0.52
LINC00520-204ENST00000556417 KIF6Q6ZMV9 814 aa11.79□□□□□ -0.52
LINC00520-204ENST00000556417 ZNF34Q8IZ26 560 aa11.79□□□□□ -0.52
LINC00520-204ENST00000556417 GPTP24298 496 aa11.78□□□□□ -0.52
LINC00520-204ENST00000556417 LRP10Q7Z4F1 713 aa11.78□□□□□ -0.52
LINC00520-204ENST00000556417 SLC51AQ86UW1 340 aa11.78□□□□□ -0.52
LINC00520-204ENST00000556417 GPC2Q8N158 579 aa11.78□□□□□ -0.52
LINC00520-204ENST00000556417 ZBTB3Q9H5J0 574 aa11.78□□□□□ -0.52
LINC00520-204ENST00000556417 CLEC11AQ9Y240 323 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms