RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 USP17L1Q7RTZ2 530 aa9.83□□□□□ -0.84
PCNX4-212ENST00000556360 TNS4Q8IZW8 715 aa9.83□□□□□ -0.84
PCNX4-212ENST00000556360 SERTM1A2A2V5 107 aa9.82□□□□□ -0.84
PCNX4-212ENST00000556360 K7ELQ4 463 aaPredicted RBP9.82□□□□□ -0.84
PCNX4-212ENST00000556360 UBTFP17480 764 aaKnown RBP9.82□□□□□ -0.84
PCNX4-212ENST00000556360 CLDN10P78369 228 aa9.82□□□□□ -0.84
PCNX4-212ENST00000556360 TPCN2Q8NHX9 752 aa9.82□□□□□ -0.84
PCNX4-212ENST00000556360 PRR12Q9ULL5 1215 aa9.82□□□□□ -0.84
PCNX4-212ENST00000556360 C1QTNF9BB2RNN3 333 aa9.81□□□□□ -0.84
PCNX4-212ENST00000556360 ATP9BO43861 1147 aa9.81□□□□□ -0.84
PCNX4-212ENST00000556360 SIN3BO75182 1162 aa9.81□□□□□ -0.84
PCNX4-212ENST00000556360 PSMA6P60900 246 aaKnown RBP9.81□□□□□ -0.84
PCNX4-212ENST00000556360 C1orf53Q5VUE5 145 aa9.81□□□□□ -0.84
PCNX4-212ENST00000556360 CCDC102BQ68D86 513 aa9.81□□□□□ -0.84
PCNX4-212ENST00000556360 LRRC69Q6ZNQ3 347 aa9.81□□□□□ -0.84
PCNX4-212ENST00000556360 CD163Q86VB7 1156 aa9.81□□□□□ -0.84
PCNX4-212ENST00000556360 ELOA3CA0A087WX78 387 aaPredicted RBP9.8□□□□□ -0.84
PCNX4-212ENST00000556360 ELOA3DA6NLF2 546 aaPredicted RBP9.8□□□□□ -0.84
PCNX4-212ENST00000556360 ADARB2-AS1A8MUL3 147 aa9.8□□□□□ -0.84
PCNX4-212ENST00000556360 ELOA3BQ3SY89 546 aa9.8□□□□□ -0.84
PCNX4-212ENST00000556360 TBCELQ5QJ74 424 aa9.8□□□□□ -0.84
PCNX4-212ENST00000556360 SH3PXD2AQ5TCZ1 1133 aa9.8□□□□□ -0.84
PCNX4-212ENST00000556360 SIX5Q8N196 739 aa9.8□□□□□ -0.84
PCNX4-212ENST00000556360 LARGE2Q8N3Y3 721 aa9.8□□□□□ -0.84
PCNX4-212ENST00000556360 ELOA3Q8NG57 546 aa9.8□□□□□ -0.84
PCNX4-212ENST00000556360 TRIM11Q96F44 468 aa9.8□□□□□ -0.84
PCNX4-212ENST00000556360 ZNF232Q9UNY5 417 aa9.8□□□□□ -0.84
PCNX4-212ENST00000556360 DKK1O94907 266 aa9.79□□□□□ -0.84
PCNX4-212ENST00000556360 HDGFL1Q5TGJ6 251 aa9.79□□□□□ -0.84
PCNX4-212ENST00000556360 TSPAN10Q9H1Z9 355 aaPredicted RBP9.79□□□□□ -0.84
PCNX4-212ENST00000556360 CHRNA4P43681 627 aa9.78□□□□□ -0.84
PCNX4-212ENST00000556360 SYT9Q86SS6 491 aa9.78□□□□□ -0.84
PCNX4-212ENST00000556360 TNFRSF25Q93038 417 aa9.78□□□□□ -0.84
PCNX4-212ENST00000556360 PALM3A6NDB9 673 aaPredicted RBP9.77□□□□□ -0.85
PCNX4-212ENST00000556360 KCNQ4P56696 695 aa9.77□□□□□ -0.85
PCNX4-212ENST00000556360 OGFOD1Q8N543 542 aa9.77□□□□□ -0.85
PCNX4-212ENST00000556360 RHPN1Q8TCX5 695 aa9.77□□□□□ -0.85
PCNX4-212ENST00000556360 SFSWAPQ12872 951 aaKnown RBP9.76□□□□□ -0.85
PCNX4-212ENST00000556360 SLC30A3Q99726 388 aa9.76□□□□□ -0.85
PCNX4-212ENST00000556360 PRDM6Q9NQX0 595 aa9.76□□□□□ -0.85
PCNX4-212ENST00000556360 MKRN1Q9UHC7 482 aaKnown RBP9.76□□□□□ -0.85
PCNX4-212ENST00000556360 SPATA31C1P0DKV0 1188 aa9.75□□□□□ -0.85
PCNX4-212ENST00000556360 ALAS2P22557 587 aa9.75□□□□□ -0.85
PCNX4-212ENST00000556360 STAG2Q8N3U4 1231 aa9.75□□□□□ -0.85
PCNX4-212ENST00000556360 PLVAPQ9BX97 442 aa9.75□□□□□ -0.85
PCNX4-212ENST00000556360 NEUROD4Q9HD90 331 aa9.75□□□□□ -0.85
PCNX4-212ENST00000556360 FURINP09958 794 aa9.74□□□□□ -0.85
PCNX4-212ENST00000556360 COL9A3Q14050 684 aaPredicted RBP9.74□□□□□ -0.85
PCNX4-212ENST00000556360 FNBP4Q8N3X1 1017 aaPredicted RBP9.74□□□□□ -0.85
PCNX4-212ENST00000556360 PHACTR1Q9C0D0 580 aa9.74□□□□□ -0.85
PCNX4-212ENST00000556360 ANKIB1Q9P2G1 1089 aa9.74□□□□□ -0.85
PCNX4-212ENST00000556360 C21orf2O43822 256 aa9.73□□□□□ -0.85
PCNX4-212ENST00000556360 TYRO3Q06418 890 aa9.73□□□□□ -0.85
PCNX4-212ENST00000556360 SPEM2Q0P670 501 aa9.73□□□□□ -0.85
PCNX4-212ENST00000556360 CHMP3Q9Y3E7 222 aa9.73□□□□□ -0.85
PCNX4-212ENST00000556360 TSEN2Q8NCE0 465 aaKnown RBP9.72□□□□□ -0.85
PCNX4-212ENST00000556360 BRD7Q9NPI1 651 aa9.72□□□□□ -0.85
PCNX4-212ENST00000556360 STARD13Q9Y3M8 1113 aa9.72□□□□□ -0.85
PCNX4-212ENST00000556360 SPDYE3A6NKU9 549 aa9.71□□□□□ -0.86
PCNX4-212ENST00000556360 XP32Q5T750 250 aa9.71□□□□□ -0.86
PCNX4-212ENST00000556360 GAS2L2Q8NHY3 880 aa9.71□□□□□ -0.86
PCNX4-212ENST00000556360 HSH2DQ96JZ2 352 aa9.71□□□□□ -0.86
PCNX4-212ENST00000556360 SUSD3Q96L08 255 aa9.71□□□□□ -0.86
PCNX4-212ENST00000556360 HCN4Q9Y3Q4 1203 aa9.71□□□□□ -0.86
PCNX4-212ENST00000556360 SFI1A8K8P3 1242 aa9.7□□□□□ -0.86
PCNX4-212ENST00000556360 NEUROD1Q13562 356 aa9.7□□□□□ -0.86
PCNX4-212ENST00000556360 CEP63Q96MT8 703 aa9.7□□□□□ -0.86
PCNX4-212ENST00000556360 C2orf49Q9BVC5 232 aaPredicted RBP9.7□□□□□ -0.86
PCNX4-212ENST00000556360 PPP1R12BO60237 982 aaPredicted RBP9.69□□□□□ -0.86
PCNX4-212ENST00000556360 ZNF280CQ8ND82 737 aa9.69□□□□□ -0.86
PCNX4-212ENST00000556360 ZNF594Q96JF6 807 aaPredicted RBP9.69□□□□□ -0.86
PCNX4-212ENST00000556360 KCNH4Q9UQ05 1017 aa9.69□□□□□ -0.86
PCNX4-212ENST00000556360 MAFBQ9Y5Q3 323 aaPredicted RBP9.69□□□□□ -0.86
PCNX4-212ENST00000556360 M0R082 166 aa9.68□□□□□ -0.86
PCNX4-212ENST00000556360 ALBP02768 609 aa9.68□□□□□ -0.86
PCNX4-212ENST00000556360 ADH7P40394 386 aa9.68□□□□□ -0.86
PCNX4-212ENST00000556360 C20orf204Q6ZNR8 217 aa9.68□□□□□ -0.86
PCNX4-212ENST00000556360 MICALL1Q8N3F8 863 aa9.68□□□□□ -0.86
PCNX4-212ENST00000556360 ZNF417Q8TAU3 575 aa9.68□□□□□ -0.86
PCNX4-212ENST00000556360 GLMNQ92990 594 aa9.68□□□□□ -0.86
PCNX4-212ENST00000556360 ZNF587Q96SQ5 575 aaPredicted RBP9.68□□□□□ -0.86
PCNX4-212ENST00000556360 NID1P14543 1247 aa9.67□□□□□ -0.86
PCNX4-212ENST00000556360 ITGB7P26010 798 aa9.67□□□□□ -0.86
PCNX4-212ENST00000556360 SEC13P55735 322 aa9.67□□□□□ -0.86
PCNX4-212ENST00000556360 HIF1AQ16665 826 aa9.67□□□□□ -0.86
PCNX4-212ENST00000556360 PROSER2Q86WR7 435 aaPredicted RBP9.67□□□□□ -0.86
PCNX4-212ENST00000556360 ALDH16A1Q8IZ83 802 aa9.67□□□□□ -0.86
PCNX4-212ENST00000556360 EFCC1Q9HA90 598 aa9.67□□□□□ -0.86
PCNX4-212ENST00000556360 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
PCNX4-212ENST00000556360 ATAD2Q6PL18 1390 aa9.66□□□□□ -0.86
PCNX4-212ENST00000556360 RASA1P20936 1047 aa9.66□□□□□ -0.86
PCNX4-212ENST00000556360 PRRT3Q5FWE3 981 aa9.66□□□□□ -0.86
PCNX4-212ENST00000556360 IER5Q5VY09 327 aa9.66□□□□□ -0.86
PCNX4-212ENST00000556360 RBM19Q9Y4C8 960 aaKnown RBP9.66□□□□□ -0.86
PCNX4-212ENST00000556360 GATA4P43694 442 aa9.65□□□□□ -0.86
PCNX4-212ENST00000556360 BTLAQ7Z6A9 289 aa9.65□□□□□ -0.86
PCNX4-212ENST00000556360 CLUAP1Q96AJ1 413 aa9.65□□□□□ -0.86
PCNX4-212ENST00000556360 RAB44Q7Z6P3 723 aaPredicted RBP9.64□□□□□ -0.87
PCNX4-212ENST00000556360 SCG3Q8WXD2 468 aaKnown RBP9.64□□□□□ -0.87
PCNX4-212ENST00000556360 DOC2BQ14184 412 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms