RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 VAMP4O75379 141 aa10.62□□□□□ -0.71
ATXN3-235ENST00000556082 CANXP27824 592 aaKnown RBP10.62□□□□□ -0.71
ATXN3-235ENST00000556082 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
ATXN3-235ENST00000556082 FAM161AQ3B820 660 aa10.62□□□□□ -0.71
ATXN3-235ENST00000556082 Q6ZNB5 142 aa10.62□□□□□ -0.71
ATXN3-235ENST00000556082 ARHGAP45Q92619 1136 aa10.62□□□□□ -0.71
ATXN3-235ENST00000556082 TMEM94Q12767 1356 aa10.62□□□□□ -0.71
ATXN3-235ENST00000556082 MARF1Q9Y4F3 1742 aaKnown RBP10.61□□□□□ -0.71
ATXN3-235ENST00000556082 USP19O94966 1318 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 KIF16BQ96L93 1317 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 FOXO3O43524 673 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 NR1I2O75469 434 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 CFHP08603 1231 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 ATF3P18847 181 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 BLOC1S3Q6QNY0 202 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 KRT28Q7Z3Y7 464 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 PANK1Q8TE04 598 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
ATXN3-235ENST00000556082 MBIPQ9NS73 344 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 SMC4Q9NTJ3 1288 aa10.61□□□□□ -0.71
ATXN3-235ENST00000556082 NFAT5O94916 1531 aa10.6□□□□□ -0.71
ATXN3-235ENST00000556082 GFRA3O60609 400 aa10.6□□□□□ -0.71
ATXN3-235ENST00000556082 ATF7IPQ6VMQ6 1270 aa10.6□□□□□ -0.71
ATXN3-235ENST00000556082 DZIP1LQ8IYY4 767 aaKnown RBP10.6□□□□□ -0.71
ATXN3-235ENST00000556082 CLUAP1Q96AJ1 413 aa10.6□□□□□ -0.71
ATXN3-235ENST00000556082 BABAM1Q9NWV8 329 aa10.6□□□□□ -0.71
ATXN3-235ENST00000556082 KIF1AQ12756 1690 aa10.6□□□□□ -0.71
ATXN3-235ENST00000556082 SLIT3O75094 1523 aa10.59□□□□□ -0.71
ATXN3-235ENST00000556082 GCP02774 474 aa10.59□□□□□ -0.71
ATXN3-235ENST00000556082 SLC10A3P09131 477 aa10.59□□□□□ -0.71
ATXN3-235ENST00000556082 MVPQ14764 893 aaKnown RBP10.59□□□□□ -0.71
ATXN3-235ENST00000556082 MTHFSDQ2M296 383 aaKnown RBP10.59□□□□□ -0.71
ATXN3-235ENST00000556082 NUTM2GQ5VZR2 741 aa10.59□□□□□ -0.71
ATXN3-235ENST00000556082 ARHGEF25Q86VW2 580 aa10.59□□□□□ -0.71
ATXN3-235ENST00000556082 THUMPD2Q9BTF0 503 aaKnown RBP10.59□□□□□ -0.71
ATXN3-235ENST00000556082 DAXXQ9UER7 740 aaPredicted RBP10.59□□□□□ -0.71
ATXN3-235ENST00000556082 COG6Q9Y2V7 657 aa10.59□□□□□ -0.71
ATXN3-235ENST00000556082 KIAA0232Q92628 1395 aa10.59□□□□□ -0.71
ATXN3-235ENST00000556082 CRB1P82279 1406 aa10.58□□□□□ -0.72
ATXN3-235ENST00000556082 PHRF1Q9P1Y6 1649 aaKnown RBP10.58□□□□□ -0.72
ATXN3-235ENST00000556082 LMTK3Q96Q04 1460 aa10.58□□□□□ -0.72
ATXN3-235ENST00000556082 RLBP1P12271 317 aa10.58□□□□□ -0.72
ATXN3-235ENST00000556082 TRIM27P14373 513 aa10.58□□□□□ -0.72
ATXN3-235ENST00000556082 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
ATXN3-235ENST00000556082 NOB1Q9ULX3 412 aaKnown RBP10.58□□□□□ -0.72
ATXN3-235ENST00000556082 FAM83GA6ND36 823 aa10.57□□□□□ -0.72
ATXN3-235ENST00000556082 NRG2O14511 850 aaPredicted RBP10.57□□□□□ -0.72
ATXN3-235ENST00000556082 HSPA2P54652 639 aa10.57□□□□□ -0.72
ATXN3-235ENST00000556082 RTF1Q92541 710 aaKnown RBP10.57□□□□□ -0.72
ATXN3-235ENST00000556082 BCL2L13Q9BXK5 485 aa10.57□□□□□ -0.72
ATXN3-235ENST00000556082 CHMP4BQ9H444 224 aaKnown RBP10.57□□□□□ -0.72
ATXN3-235ENST00000556082 LAS1LQ9Y4W2 734 aaKnown RBP10.57□□□□□ -0.72
ATXN3-235ENST00000556082 SOS1Q07889 1333 aaPredicted RBP10.57□□□□□ -0.72
ATXN3-235ENST00000556082 MSH6P52701 1360 aa10.56□□□□□ -0.72
ATXN3-235ENST00000556082 GPR37O15354 613 aa10.56□□□□□ -0.72
ATXN3-235ENST00000556082 TWISTNBQ3B726 338 aaPredicted RBP10.56□□□□□ -0.72
ATXN3-235ENST00000556082 FTSJ3Q8IY81 847 aaKnown RBP10.56□□□□□ -0.72
ATXN3-235ENST00000556082 C8orf58Q8NAV2 365 aa10.56□□□□□ -0.72
ATXN3-235ENST00000556082 DDX19BQ9UMR2 479 aa10.56□□□□□ -0.72
ATXN3-235ENST00000556082 NCAPD2Q15021 1401 aa10.56□□□□□ -0.72
ATXN3-235ENST00000556082 NPHP3Q7Z494 1330 aa10.56□□□□□ -0.72
ATXN3-235ENST00000556082 TRPM3Q9HCF6 1732 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-235ENST00000556082 GNAT3A8MTJ3 354 aa10.55□□□□□ -0.72
ATXN3-235ENST00000556082 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-235ENST00000556082 DCTN1Q14203 1278 aa10.55□□□□□ -0.72
ATXN3-235ENST00000556082 MCM10Q7L590 875 aa10.55□□□□□ -0.72
ATXN3-235ENST00000556082 TSPYL6Q8N831 410 aa10.55□□□□□ -0.72
ATXN3-235ENST00000556082 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
ATXN3-235ENST00000556082 RWDD1Q9H446 243 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-235ENST00000556082 IGHDP01880 384 aa10.54□□□□□ -0.72
ATXN3-235ENST00000556082 NBPF6Q5VWK0 638 aa10.54□□□□□ -0.72
ATXN3-235ENST00000556082 SULF1Q8IWU6 871 aa10.54□□□□□ -0.72
ATXN3-235ENST00000556082 NBPF4Q96M43 638 aa10.54□□□□□ -0.72
ATXN3-235ENST00000556082 API5Q9BZZ5 524 aaKnown RBP10.54□□□□□ -0.72
ATXN3-235ENST00000556082 PCDHB15Q9Y5E8 787 aa10.54□□□□□ -0.72
ATXN3-235ENST00000556082 STRCP1A6NGW2 1772 aa10.54□□□□□ -0.72
ATXN3-235ENST00000556082 PLEKHG2Q9H7P9 1386 aa10.53□□□□□ -0.72
ATXN3-235ENST00000556082 DLG5Q8TDM6 1919 aa10.53□□□□□ -0.72
ATXN3-235ENST00000556082 RNF223E7ERA6 249 aa10.53□□□□□ -0.72
ATXN3-235ENST00000556082 ADH1BP00325 375 aa10.53□□□□□ -0.72
ATXN3-235ENST00000556082 HDAC1Q13547 482 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-235ENST00000556082 AMOTQ4VCS5 1084 aa10.53□□□□□ -0.72
ATXN3-235ENST00000556082 GPIHBP1Q8IV16 184 aa10.53□□□□□ -0.72
ATXN3-235ENST00000556082 ZBTB40Q9NUA8 1239 aa10.53□□□□□ -0.72
ATXN3-235ENST00000556082 TNNQ9UQP3 1299 aa10.53□□□□□ -0.72
ATXN3-235ENST00000556082 MAP3K5Q99683 1374 aa10.52□□□□□ -0.72
ATXN3-235ENST00000556082 FECHP22830 423 aa10.52□□□□□ -0.73
ATXN3-235ENST00000556082 XPCQ01831 940 aaPredicted RBP10.52□□□□□ -0.73
ATXN3-235ENST00000556082 PLEKHO1Q53GL0 409 aaPredicted RBP10.52□□□□□ -0.73
ATXN3-235ENST00000556082 SCUBE3Q8IX30 993 aa10.52□□□□□ -0.73
ATXN3-235ENST00000556082 TMEM57Q8N5G2 664 aa10.52□□□□□ -0.73
ATXN3-235ENST00000556082 IL17REQ8NFR9 667 aa10.52□□□□□ -0.73
ATXN3-235ENST00000556082 LTV1Q96GA3 475 aaPredicted RBP10.52□□□□□ -0.73
ATXN3-235ENST00000556082 ABCC4O15439 1325 aa10.52□□□□□ -0.73
ATXN3-235ENST00000556082 SPATA31A3Q5VYP0 1347 aa10.52□□□□□ -0.73
ATXN3-235ENST00000556082 TAF7Q15545 349 aaPredicted RBP10.51□□□□□ -0.73
ATXN3-235ENST00000556082 TRAF7Q6Q0C0 670 aa10.51□□□□□ -0.73
ATXN3-235ENST00000556082 BACH2Q9BYV9 841 aa10.51□□□□□ -0.73
ATXN3-235ENST00000556082 ABCC6O95255 1503 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms