RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-222	ENST00000555914	BCOR	Q6W2J9	1755 aa		11.8	□□□□□ -0.52
HNRNPC-222	ENST00000555914	NFKBIE	O00221	500 aa		11.8	□□□□□ -0.52
HNRNPC-222	ENST00000555914	CCDC184	Q52MB2	194 aa		11.8	□□□□□ -0.52
HNRNPC-222	ENST00000555914	DZIP3	Q86Y13	1208 aa	Known RBP	11.8	□□□□□ -0.52
HNRNPC-222	ENST00000555914	MRS2	Q9HD23	443 aa		11.8	□□□□□ -0.52
HNRNPC-222	ENST00000555914	DLG5	Q8TDM6	1919 aa		11.79	□□□□□ -0.52
HNRNPC-222	ENST00000555914	NBPF26	B4DH59	902 aa		11.79	□□□□□ -0.52
HNRNPC-222	ENST00000555914	SNRPA1	P09661	255 aa	Known RBP	11.79	□□□□□ -0.52
HNRNPC-222	ENST00000555914	HTRA3	P83110	453 aa		11.79	□□□□□ -0.52
HNRNPC-222	ENST00000555914	NBPF10	Q6P3W6	841 aa	Known RBP	11.79	□□□□□ -0.52
HNRNPC-222	ENST00000555914	NBPF15	Q8N660	670 aa		11.79	□□□□□ -0.52
HNRNPC-222	ENST00000555914	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.79	□□□□□ -0.52	1e-21	■□□□□ 9
HNRNPC-222	ENST00000555914	SETDB2	Q96T68	719 aa		11.79	□□□□□ -0.52
HNRNPC-222	ENST00000555914	BRIP1	Q9BX63	1249 aa		11.79	□□□□□ -0.52
HNRNPC-222	ENST00000555914	RBM19	Q9Y4C8	960 aa	Known RBP	11.79	□□□□□ -0.52
HNRNPC-222	ENST00000555914	C21orf2	O43822	256 aa		11.78	□□□□□ -0.52
HNRNPC-222	ENST00000555914	LMNB1	P20700	586 aa		11.78	□□□□□ -0.52
HNRNPC-222	ENST00000555914	UBE2Q2	Q8WVN8	375 aa		11.78	□□□□□ -0.52
HNRNPC-222	ENST00000555914	KDM2B	Q8NHM5	1336 aa		11.78	□□□□□ -0.52
HNRNPC-222	ENST00000555914	PDE6B	P35913	854 aa		11.78	□□□□□ -0.52
HNRNPC-222	ENST00000555914	CACNA1S	Q13698	1873 aa		11.78	□□□□□ -0.52
HNRNPC-222	ENST00000555914	NPM2	Q86SE8	214 aa	Known RBP	11.78	□□□□□ -0.52
HNRNPC-222	ENST00000555914	CNBD1	Q8NA66	436 aa		11.78	□□□□□ -0.52
HNRNPC-222	ENST00000555914	PLEKHF1	Q96S99	279 aa		11.78	□□□□□ -0.52
HNRNPC-222	ENST00000555914	SLX4	Q8IY92	1834 aa		11.77	□□□□□ -0.52
HNRNPC-222	ENST00000555914	HTATSF1	O43719	755 aa	Known RBP	11.77	□□□□□ -0.53
HNRNPC-222	ENST00000555914	TAF7	Q15545	349 aa	Predicted RBP	11.77	□□□□□ -0.53
HNRNPC-222	ENST00000555914	DNAJC5G	Q8N7S2	189 aa		11.77	□□□□□ -0.53
HNRNPC-222	ENST00000555914	RBM46	Q8TBY0	533 aa	Known RBP	11.77	□□□□□ -0.53
HNRNPC-222	ENST00000555914	THUMPD2	Q9BTF0	503 aa	Known RBP	11.77	□□□□□ -0.53
HNRNPC-222	ENST00000555914	FER1L6	Q2WGJ9	1857 aa		11.77	□□□□□ -0.53
HNRNPC-222	ENST00000555914	APLP1	P51693	650 aa		11.76	□□□□□ -0.53
HNRNPC-222	ENST00000555914	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.76	□□□□□ -0.53
HNRNPC-222	ENST00000555914	TIAM2	Q8IVF5	1701 aa		11.76	□□□□□ -0.53
HNRNPC-222	ENST00000555914	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.76	□□□□□ -0.53
HNRNPC-222	ENST00000555914	GLTPD2	A6NH11	291 aa		11.75	□□□□□ -0.53
HNRNPC-222	ENST00000555914	NPHP1	O15259	732 aa		11.75	□□□□□ -0.53
HNRNPC-222	ENST00000555914	SRGN	P10124	158 aa		11.75	□□□□□ -0.53
HNRNPC-222	ENST00000555914	HLF	Q16534	295 aa		11.75	□□□□□ -0.53
HNRNPC-222	ENST00000555914	PPP4R2	Q9NY27	417 aa		11.75	□□□□□ -0.53
HNRNPC-222	ENST00000555914	FAM177B	A6PVY3	158 aa		11.75	□□□□□ -0.53
HNRNPC-222	ENST00000555914	POTEC	B2RU33	542 aa		11.75	□□□□□ -0.53
HNRNPC-222	ENST00000555914	ST5	P78524	1137 aa		11.75	□□□□□ -0.53
HNRNPC-222	ENST00000555914	CLEC4G	Q6UXB4	293 aa		11.75	□□□□□ -0.53
HNRNPC-222	ENST00000555914	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.75	□□□□□ -0.53
HNRNPC-222	ENST00000555914	KDM3B	Q7LBC6	1761 aa		11.74	□□□□□ -0.53
HNRNPC-222	ENST00000555914	WDR90	Q96KV7	1748 aa		11.74	□□□□□ -0.53
HNRNPC-222	ENST00000555914	PRPF40B	Q6NWY9	871 aa	Known RBP	11.74	□□□□□ -0.53
HNRNPC-222	ENST00000555914	NGEF	Q8N5V2	710 aa		11.74	□□□□□ -0.53
HNRNPC-222	ENST00000555914	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
HNRNPC-222	ENST00000555914	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-222	ENST00000555914	EIF4A1	P60842	406 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-222	ENST00000555914	OLFM4	Q6UX06	510 aa		11.73	□□□□□ -0.53
HNRNPC-222	ENST00000555914	FAM9B	Q8IZU0	186 aa		11.73	□□□□□ -0.53
HNRNPC-222	ENST00000555914	MASTL	Q96GX5	879 aa		11.73	□□□□□ -0.53
HNRNPC-222	ENST00000555914	PDZRN3	Q9UPQ7	1066 aa		11.73	□□□□□ -0.53
HNRNPC-222	ENST00000555914	LAMB4	A4D0S4	1761 aa		11.73	□□□□□ -0.53
HNRNPC-222	ENST00000555914	DICER1	Q9UPY3	1922 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-222	ENST00000555914	FSTL1	Q12841	308 aa		11.72	□□□□□ -0.53
HNRNPC-222	ENST00000555914	NFE2L2	Q16236	605 aa		11.72	□□□□□ -0.53
HNRNPC-222	ENST00000555914	ERFE	Q4G0M1	354 aa		11.72	□□□□□ -0.53
HNRNPC-222	ENST00000555914	STYK1	Q6J9G0	422 aa		11.72	□□□□□ -0.53
HNRNPC-222	ENST00000555914	CNKSR1	Q969H4	720 aa		11.72	□□□□□ -0.53
HNRNPC-222	ENST00000555914	ZNF652	Q9Y2D9	606 aa		11.72	□□□□□ -0.53
HNRNPC-222	ENST00000555914	ARFGEF2	Q9Y6D5	1785 aa		11.72	□□□□□ -0.53
HNRNPC-222	ENST00000555914	KLRG2	A4D1S0	409 aa	Predicted RBP	11.71	□□□□□ -0.53
HNRNPC-222	ENST00000555914	VEGFA	P15692	232 aa	Predicted RBP	11.71	□□□□□ -0.53
HNRNPC-222	ENST00000555914	TTLL7	Q6ZT98	887 aa		11.71	□□□□□ -0.53
HNRNPC-222	ENST00000555914	C7orf43	Q8WVR3	580 aa		11.71	□□□□□ -0.53
HNRNPC-222	ENST00000555914	TAOK3	Q9H2K8	898 aa		11.71	□□□□□ -0.53
HNRNPC-222	ENST00000555914	RRP7A	Q9Y3A4	280 aa	Known RBP	11.71	□□□□□ -0.53
HNRNPC-222	ENST00000555914	NUP98	P52948	1817 aa		11.71	□□□□□ -0.53
HNRNPC-222	ENST00000555914	NEFM	P07197	916 aa		11.71	□□□□□ -0.54
HNRNPC-222	ENST00000555914	MYL6B	P14649	208 aa		11.71	□□□□□ -0.54
HNRNPC-222	ENST00000555914	IFFO2	Q5TF58	517 aa		11.71	□□□□□ -0.54
HNRNPC-222	ENST00000555914	TPTE2	Q6XPS3	522 aa		11.71	□□□□□ -0.54
HNRNPC-222	ENST00000555914	SMC1B	Q8NDV3	1235 aa		11.71	□□□□□ -0.54
HNRNPC-222	ENST00000555914	RNF123	Q5XPI4	1314 aa		11.7	□□□□□ -0.54
HNRNPC-222	ENST00000555914	NUTM1	Q86Y26	1132 aa		11.7	□□□□□ -0.54
HNRNPC-222	ENST00000555914	PNISR	Q8TF01	805 aa	Known RBP	11.7	□□□□□ -0.54
HNRNPC-222	ENST00000555914	LTBP3	Q9NS15	1303 aa		11.7	□□□□□ -0.54
HNRNPC-222	ENST00000555914	DDN	O94850	711 aa	Predicted RBP	11.69	□□□□□ -0.54
HNRNPC-222	ENST00000555914	POTEI	P0CG38	1075 aa		11.69	□□□□□ -0.54
HNRNPC-222	ENST00000555914	POTEJ	P0CG39	1038 aa		11.69	□□□□□ -0.54
HNRNPC-222	ENST00000555914	NPR1	P16066	1061 aa		11.69	□□□□□ -0.54
HNRNPC-222	ENST00000555914	DPY19L2	Q6NUT2	758 aa		11.69	□□□□□ -0.54
HNRNPC-222	ENST00000555914	SLC51A	Q86UW1	340 aa		11.69	□□□□□ -0.54
HNRNPC-222	ENST00000555914	MAPK8IP3	Q9UPT6	1336 aa		11.69	□□□□□ -0.54
HNRNPC-222	ENST00000555914	ABCC12	Q96J65	1359 aa		11.69	□□□□□ -0.54
HNRNPC-222	ENST00000555914	RIPK4	P57078	832 aa		11.68	□□□□□ -0.54
HNRNPC-222	ENST00000555914	KLRG1	Q96E93	195 aa		11.68	□□□□□ -0.54
HNRNPC-222	ENST00000555914	ZBTB3	Q9H5J0	574 aa		11.68	□□□□□ -0.54
HNRNPC-222	ENST00000555914	UBN2	Q6ZU65	1347 aa		11.68	□□□□□ -0.54
HNRNPC-222	ENST00000555914	RGL2	O15211	777 aa		11.68	□□□□□ -0.54
HNRNPC-222	ENST00000555914	GPT	P24298	496 aa		11.68	□□□□□ -0.54
HNRNPC-222	ENST00000555914	GTF2E1	P29083	439 aa	Predicted RBP	11.68	□□□□□ -0.54
HNRNPC-222	ENST00000555914	RALBP1	Q15311	655 aa		11.68	□□□□□ -0.54
HNRNPC-222	ENST00000555914	MAP3K15	Q6ZN16	1313 aa		11.68	□□□□□ -0.54
HNRNPC-222	ENST00000555914	ERVV-1	B6SEH8	477 aa		11.67	□□□□□ -0.54
HNRNPC-222	ENST00000555914	ANXA1	P04083	346 aa		11.67	□□□□□ -0.54

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