RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 CEMIPQ8WUJ3 1361 aa25.98■■□□□ 1.75
FOXN3-211ENST00000555855 TIAM2Q8IVF5 1701 aa25.98■■□□□ 1.75
FOXN3-211ENST00000555855 CLEC4GQ6UXB4 293 aa25.98■■□□□ 1.75
FOXN3-211ENST00000555855 PRPF40BQ6NWY9 871 aaKnown RBP25.97■■□□□ 1.75
FOXN3-211ENST00000555855 NBPF5PQ86XG9 351 aaPredicted RBP25.97■■□□□ 1.75
FOXN3-211ENST00000555855 ZNF652Q9Y2D9 606 aa25.97■■□□□ 1.75
FOXN3-211ENST00000555855 SNRPA1P09661 255 aaKnown RBP25.96■■□□□ 1.75
FOXN3-211ENST00000555855 CHADLQ6NUI6 762 aa25.96■■□□□ 1.75
FOXN3-211ENST00000555855 RSPH6AQ9H0K4 717 aa25.96■■□□□ 1.75
FOXN3-211ENST00000555855 DICER1Q9UPY3 1922 aaKnown RBP25.96■■□□□ 1.75
FOXN3-211ENST00000555855 FER1L6Q2WGJ9 1857 aa25.96■■□□□ 1.75
FOXN3-211ENST00000555855 DDNO94850 711 aaPredicted RBP25.95■■□□□ 1.74
FOXN3-211ENST00000555855 HSPA1AP0DMV8 641 aaKnown RBP25.95■■□□□ 1.74
FOXN3-211ENST00000555855 HSPA1BP0DMV9 641 aaKnown RBP25.95■■□□□ 1.74
FOXN3-211ENST00000555855 SIPA1L3O60292 1781 aaPredicted RBP25.95■■□□□ 1.74
FOXN3-211ENST00000555855 SCN7AQ01118 1682 aa25.94■■□□□ 1.74
FOXN3-211ENST00000555855 PIP4K2AP48426 406 aaPredicted RBP25.94■■□□□ 1.74
FOXN3-211ENST00000555855 CAPN15O75808 1086 aa25.93■■□□□ 1.74
FOXN3-211ENST00000555855 U2AF1L5P0DN76 240 aaPredicted RBP25.93■■□□□ 1.74
FOXN3-211ENST00000555855 U2AF1Q01081 240 aaKnown RBP eCLIP25.93■■□□□ 1.74
FOXN3-211ENST00000555855 TPTE2Q6XPS3 522 aa25.93■■□□□ 1.74
FOXN3-211ENST00000555855 SLX4Q8IY92 1834 aa25.92■■□□□ 1.74
FOXN3-211ENST00000555855 IQCA1LA6NCM1 817 aa25.91■■□□□ 1.74
FOXN3-211ENST00000555855 NPR1P16066 1061 aa25.91■■□□□ 1.74
FOXN3-211ENST00000555855 CCDC93Q567U6 631 aa25.91■■□□□ 1.74
FOXN3-211ENST00000555855 CREBZFQ9NS37 354 aa25.91■■□□□ 1.74
FOXN3-211ENST00000555855 PRAMEF22A3QJZ6 481 aa25.9■■□□□ 1.74
FOXN3-211ENST00000555855 MCM10Q7L590 875 aa25.9■■□□□ 1.74
FOXN3-211ENST00000555855 COL11A2P13942 1736 aaPredicted RBP25.89■■□□□ 1.74
FOXN3-211ENST00000555855 NIP7Q9Y221 180 aaKnown RBP eCLIP25.89■■□□□ 1.74
FOXN3-211ENST00000555855 HTATSF1O43719 755 aaKnown RBP25.88■■□□□ 1.73
FOXN3-211ENST00000555855 C7orf43Q8WVR3 580 aa25.88■■□□□ 1.73
FOXN3-211ENST00000555855 RGL2O15211 777 aa25.87■■□□□ 1.73
FOXN3-211ENST00000555855 GTF2E1P29083 439 aaPredicted RBP25.87■■□□□ 1.73
FOXN3-211ENST00000555855 KLRG2A4D1S0 409 aaPredicted RBP25.86■■□□□ 1.73
FOXN3-211ENST00000555855 FAM177BA6PVY3 158 aa25.86■■□□□ 1.73
FOXN3-211ENST00000555855 POTEIP0CG38 1075 aa25.86■■□□□ 1.73
FOXN3-211ENST00000555855 POTEJP0CG39 1038 aa25.86■■□□□ 1.73
FOXN3-211ENST00000555855 ALDH1B1P30837 517 aa25.86■■□□□ 1.73
FOXN3-211ENST00000555855 FKBP4Q02790 459 aaKnown RBP eCLIP25.86■■□□□ 1.73
FOXN3-211ENST00000555855 TAF7Q15545 349 aaPredicted RBP25.86■■□□□ 1.73
FOXN3-211ENST00000555855 RTKN2Q8IZC4 609 aa25.86■■□□□ 1.73
FOXN3-211ENST00000555855 MKRN1Q9UHC7 482 aaKnown RBP25.86■■□□□ 1.73
FOXN3-211ENST00000555855 CACNA1SQ13698 1873 aa25.85■■□□□ 1.73
FOXN3-211ENST00000555855 LDHDQ86WU2 507 aa25.85■■□□□ 1.73
FOXN3-211ENST00000555855 NBPF26B4DH59 902 aa25.84■■□□□ 1.73
FOXN3-211ENST00000555855 DCTN1Q14203 1278 aa25.84■■□□□ 1.73
FOXN3-211ENST00000555855 NBPF10Q6P3W6 841 aaKnown RBP25.84■■□□□ 1.73
FOXN3-211ENST00000555855 NBPF15Q8N660 670 aa25.84■■□□□ 1.73
FOXN3-211ENST00000555855 L3MBTL3Q96JM7 780 aaPredicted RBP25.84■■□□□ 1.73
FOXN3-211ENST00000555855 TAF1DQ9H5J8 278 aaPredicted RBP25.84■■□□□ 1.73
FOXN3-211ENST00000555855 BCORQ6W2J9 1755 aa25.83■■□□□ 1.73
FOXN3-211ENST00000555855 NEFMP07197 916 aa25.83■■□□□ 1.73
FOXN3-211ENST00000555855 PPP2R1AP30153 589 aa25.83■■□□□ 1.73
FOXN3-211ENST00000555855 ZNF277Q9NRM2 450 aaPredicted RBP25.83■■□□□ 1.73
FOXN3-211ENST00000555855 CLEC11AQ9Y240 323 aa25.82■■□□□ 1.72
FOXN3-211ENST00000555855 EAPPQ56P03 285 aaPredicted RBP25.81■■□□□ 1.72
FOXN3-211ENST00000555855 HACL1Q9UJ83 578 aa25.81■■□□□ 1.72
FOXN3-211ENST00000555855 ARFGEF2Q9Y6D5 1785 aa25.8■■□□□ 1.72
FOXN3-211ENST00000555855 PCNTO95613 3336 aa25.79■■□□□ 1.72
FOXN3-211ENST00000555855 HLFQ16534 295 aa25.79■■□□□ 1.72
FOXN3-211ENST00000555855 SYNE4Q8N205 404 aa25.79■■□□□ 1.72
FOXN3-211ENST00000555855 NYXQ9GZU5 481 aa25.79■■□□□ 1.72
FOXN3-211ENST00000555855 MIS18AQ9NYP9 233 aa25.79■■□□□ 1.72
FOXN3-211ENST00000555855 SCN4AP35499 1836 aa25.79■■□□□ 1.72
FOXN3-211ENST00000555855 NGEFQ8N5V2 710 aa25.78■■□□□ 1.72
FOXN3-211ENST00000555855 PNISRQ8TF01 805 aaKnown RBP25.78■■□□□ 1.72
FOXN3-211ENST00000555855 TMEM88BA6NKF7 163 aa25.77■■□□□ 1.72
FOXN3-211ENST00000555855 IARSP41252 1262 aaKnown RBP25.77■■□□□ 1.72
FOXN3-211ENST00000555855 OLFM4Q6UX06 510 aa25.77■■□□□ 1.72
FOXN3-211ENST00000555855 PASKQ96RG2 1323 aa25.77■■□□□ 1.72
FOXN3-211ENST00000555855 EPHX2P34913 555 aa25.76■■□□□ 1.71
FOXN3-211ENST00000555855 PNMA8AQ86V59 439 aaPredicted RBP25.76■■□□□ 1.71
FOXN3-211ENST00000555855 JDP2Q8WYK2 163 aa25.76■■□□□ 1.71
FOXN3-211ENST00000555855 CNTNAP1P78357 1384 aa25.75■■□□□ 1.71
FOXN3-211ENST00000555855 ZNF541Q9H0D2 1346 aa25.75■■□□□ 1.71
FOXN3-211ENST00000555855 ERVV-1B6SEH8 477 aa25.75■■□□□ 1.71
FOXN3-211ENST00000555855 ITGBL1O95965 494 aaPredicted RBP25.75■■□□□ 1.71
FOXN3-211ENST00000555855 CC2D2BQ6DHV5 1058 aa25.75■■□□□ 1.71
FOXN3-211ENST00000555855 AIDAQ96BJ3 306 aa25.74■■□□□ 1.71
FOXN3-211ENST00000555855 RRP7AQ9Y3A4 280 aaKnown RBP25.74■■□□□ 1.71
FOXN3-211ENST00000555855 FZD9O00144 591 aa25.73■■□□□ 1.71
FOXN3-211ENST00000555855 KIF6Q6ZMV9 814 aa25.73■■□□□ 1.71
FOXN3-211ENST00000555855 GPC2Q8N158 579 aa25.72■■□□□ 1.71
FOXN3-211ENST00000555855 RPGRQ92834 1020 aaKnown RBP25.72■■□□□ 1.71
FOXN3-211ENST00000555855 PSMD1Q99460 953 aa25.72■■□□□ 1.71
FOXN3-211ENST00000555855 EIF6P56537 245 aaKnown RBP25.71■■□□□ 1.71
FOXN3-211ENST00000555855 GRIPAP1Q4V328 841 aa25.71■■□□□ 1.71
FOXN3-211ENST00000555855 NUTM1Q86Y26 1132 aa25.71■■□□□ 1.71
FOXN3-211ENST00000555855 CNTROBQ8N137 903 aa25.71■■□□□ 1.71
FOXN3-211ENST00000555855 RNF123Q5XPI4 1314 aa25.7■■□□□ 1.71
FOXN3-211ENST00000555855 MAP3K15Q6ZN16 1313 aa25.7■■□□□ 1.71
FOXN3-211ENST00000555855 FOXN1O15353 648 aa25.7■■□□□ 1.7
FOXN3-211ENST00000555855 VEGFBP49765 207 aa25.7■■□□□ 1.7
FOXN3-211ENST00000555855 CRY2Q49AN0 593 aa25.7■■□□□ 1.7
FOXN3-211ENST00000555855 PRDM10Q9NQV6 1147 aa25.69■■□□□ 1.7
FOXN3-211ENST00000555855 MYL6BP14649 208 aa25.68■■□□□ 1.7
FOXN3-211ENST00000555855 CTCFP49711 727 aaPredicted RBP25.68■■□□□ 1.7
FOXN3-211ENST00000555855 EIF4A1P60842 406 aaKnown RBP25.68■■□□□ 1.7
FOXN3-211ENST00000555855 DEFB115Q30KQ5 88 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms