RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 WDR63Q8IWG1 891 aa15.3■□□□□ 0.04
MTHFD1-211ENST00000555709 USP42Q9H9J4 1324 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-211ENST00000555709 DICER1Q9UPY3 1922 aaKnown RBP15.29■□□□□ 0.04
MTHFD1-211ENST00000555709 TM4SF1P30408 202 aa15.29■□□□□ 0.04
MTHFD1-211ENST00000555709 IL17REQ8NFR9 667 aa15.29■□□□□ 0.04
MTHFD1-211ENST00000555709 KDM3BQ7LBC6 1761 aa15.29■□□□□ 0.04
MTHFD1-211ENST00000555709 TMEM88BA6NKF7 163 aa15.28■□□□□ 0.04
MTHFD1-211ENST00000555709 HSP90AB1P08238 724 aaKnown RBP15.28■□□□□ 0.04
MTHFD1-211ENST00000555709 GOLGA2Q08379 1002 aa15.28■□□□□ 0.04
MTHFD1-211ENST00000555709 RTF1Q92541 710 aaKnown RBP15.28■□□□□ 0.04
MTHFD1-211ENST00000555709 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
MTHFD1-211ENST00000555709 RASSF10A6NK89 507 aa15.27■□□□□ 0.04
MTHFD1-211ENST00000555709 RNMTO43148 476 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-211ENST00000555709 ITGBL1O95965 494 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-211ENST00000555709 CALD1Q05682 793 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-211ENST00000555709 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
MTHFD1-211ENST00000555709 LGR6Q9HBX8 967 aa15.27■□□□□ 0.04
MTHFD1-211ENST00000555709 NRXN2Q9P2S2 1712 aa15.26■□□□□ 0.03
MTHFD1-211ENST00000555709 ZNF853P0CG23 659 aa15.26■□□□□ 0.03
MTHFD1-211ENST00000555709 SLFN5Q08AF3 891 aa15.26■□□□□ 0.03
MTHFD1-211ENST00000555709 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
MTHFD1-211ENST00000555709 AFDNP55196 1824 aaKnown RBP15.26■□□□□ 0.03
MTHFD1-211ENST00000555709 E9PSI1 815 aa15.25■□□□□ 0.03
MTHFD1-211ENST00000555709 MAP2K1Q02750 393 aaPredicted RBP15.25■□□□□ 0.03
MTHFD1-211ENST00000555709 LDHDQ86WU2 507 aa15.25■□□□□ 0.03
MTHFD1-211ENST00000555709 TRMT2AQ8IZ69 625 aaKnown RBP15.25■□□□□ 0.03
MTHFD1-211ENST00000555709 TTLL6Q8N841 843 aa15.25■□□□□ 0.03
MTHFD1-211ENST00000555709 IFT57Q9NWB7 429 aa15.25■□□□□ 0.03
MTHFD1-211ENST00000555709 THSD7BQ9C0I4 1608 aa15.25■□□□□ 0.03
MTHFD1-211ENST00000555709 DDNO94850 711 aaPredicted RBP15.24■□□□□ 0.03
MTHFD1-211ENST00000555709 ERFEQ4G0M1 354 aa15.24■□□□□ 0.03
MTHFD1-211ENST00000555709 WDR33Q9C0J8 1336 aaKnown RBP15.23■□□□□ 0.03
MTHFD1-211ENST00000555709 FANCIQ9NVI1 1328 aa15.23■□□□□ 0.03
MTHFD1-211ENST00000555709 FER1L6Q2WGJ9 1857 aa15.23■□□□□ 0.03
MTHFD1-211ENST00000555709 DUSP27Q5VZP5 1158 aa15.23■□□□□ 0.03
MTHFD1-211ENST00000555709 CFAP44Q96MT7 982 aa15.23■□□□□ 0.03
MTHFD1-211ENST00000555709 UBR2Q8IWV8 1755 aa15.23■□□□□ 0.03
MTHFD1-211ENST00000555709 ERVV-2B6SEH9 535 aa15.22■□□□□ 0.03
MTHFD1-211ENST00000555709 CHL1O00533 1208 aa15.22■□□□□ 0.03
MTHFD1-211ENST00000555709 CRKLP46109 303 aaKnown RBP15.22■□□□□ 0.03
MTHFD1-211ENST00000555709 GNAI1P63096 354 aa15.22■□□□□ 0.03
MTHFD1-211ENST00000555709 DEFB115Q30KQ5 88 aa15.22■□□□□ 0.03
MTHFD1-211ENST00000555709 MYH16Q9H6N6 1097 aa15.22■□□□□ 0.03
MTHFD1-211ENST00000555709 SLC52A2Q9HAB3 445 aa15.22■□□□□ 0.03
MTHFD1-211ENST00000555709 SCN4AP35499 1836 aa15.22■□□□□ 0.03
MTHFD1-211ENST00000555709 ADAMTSL1Q8N6G6 1762 aa15.21■□□□□ 0.03
MTHFD1-211ENST00000555709 TEFQ10587 303 aa15.21■□□□□ 0.03
MTHFD1-211ENST00000555709 TSR2Q969E8 191 aaKnown RBP15.21■□□□□ 0.03
MTHFD1-211ENST00000555709 TAF1DQ9H5J8 278 aaPredicted RBP15.21■□□□□ 0.03
MTHFD1-211ENST00000555709 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
MTHFD1-211ENST00000555709 BABAM1Q9NWV8 329 aa15.21■□□□□ 0.03
MTHFD1-211ENST00000555709 NFIXQ14938 502 aa15.2■□□□□ 0.02
MTHFD1-211ENST00000555709 TAF7Q15545 349 aaPredicted RBP15.2■□□□□ 0.02
MTHFD1-211ENST00000555709 C2CD5Q86YS7 1000 aa15.2■□□□□ 0.02
MTHFD1-211ENST00000555709 L3MBTL3Q96JM7 780 aaPredicted RBP15.2■□□□□ 0.02
MTHFD1-211ENST00000555709 TJP1Q07157 1748 aa15.2■□□□□ 0.02
MTHFD1-211ENST00000555709 IQCA1LA6NCM1 817 aa15.19■□□□□ 0.02
MTHFD1-211ENST00000555709 INTS5Q6P9B9 1019 aaKnown RBP15.19■□□□□ 0.02
MTHFD1-211ENST00000555709 CARMIL3Q8ND23 1372 aa15.19■□□□□ 0.02
MTHFD1-211ENST00000555709 LTBP3Q9NS15 1303 aa15.18■□□□□ 0.02
MTHFD1-211ENST00000555709 CABP4P57796 275 aa15.18■□□□□ 0.02
MTHFD1-211ENST00000555709 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
MTHFD1-211ENST00000555709 NFATC2IPQ8NCF5 419 aa15.18■□□□□ 0.02
MTHFD1-211ENST00000555709 MCOLN1Q9GZU1 580 aa15.18■□□□□ 0.02
MTHFD1-211ENST00000555709 TSPYL4Q9UJ04 414 aa15.18■□□□□ 0.02
MTHFD1-211ENST00000555709 LAS1LQ9Y4W2 734 aaKnown RBP15.18■□□□□ 0.02
MTHFD1-211ENST00000555709 H0YIN7 160 aa15.17■□□□□ 0.02
MTHFD1-211ENST00000555709 MIS18AQ9NYP9 233 aa15.17■□□□□ 0.02
MTHFD1-211ENST00000555709 LTBP1Q14766 1721 aa15.17■□□□□ 0.02
MTHFD1-211ENST00000555709 BTBD11A6QL63 1104 aa15.16■□□□□ 0.02
MTHFD1-211ENST00000555709 C21orf2O43822 256 aa15.16■□□□□ 0.02
MTHFD1-211ENST00000555709 SERPINB2P05120 415 aa15.16■□□□□ 0.02
MTHFD1-211ENST00000555709 HEG1Q9ULI3 1381 aa15.15■□□□□ 0.02
MTHFD1-211ENST00000555709 ANKRD31Q8N7Z5 1873 aa15.15■□□□□ 0.02
MTHFD1-211ENST00000555709 PTCD1O75127 700 aaKnown RBP15.15■□□□□ 0.02
MTHFD1-211ENST00000555709 CENPBP07199 599 aaPredicted RBP15.15■□□□□ 0.02
MTHFD1-211ENST00000555709 TAOK3Q9H2K8 898 aa15.15■□□□□ 0.02
MTHFD1-211ENST00000555709 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
MTHFD1-211ENST00000555709 LAMB4A4D0S4 1761 aa15.15■□□□□ 0.02
MTHFD1-211ENST00000555709 KCNQ3O43525 872 aa15.14■□□□□ 0.01
MTHFD1-211ENST00000555709 ZPR1O75312 459 aa15.14■□□□□ 0.01
MTHFD1-211ENST00000555709 EXOSC9Q06265 439 aaKnown RBP15.14■□□□□ 0.01
MTHFD1-211ENST00000555709 CNTROBQ8N137 903 aa15.14■□□□□ 0.01
MTHFD1-211ENST00000555709 TSKSQ9UJT2 592 aa15.14■□□□□ 0.01
MTHFD1-211ENST00000555709 SOS1Q07889 1333 aaPredicted RBP15.14■□□□□ 0.01
MTHFD1-211ENST00000555709 COL11A2P13942 1736 aaPredicted RBP15.13■□□□□ 0.01
MTHFD1-211ENST00000555709 EIF4A1P60842 406 aaKnown RBP15.13■□□□□ 0.01
MTHFD1-211ENST00000555709 SLC39A6Q13433 755 aa15.13■□□□□ 0.01
MTHFD1-211ENST00000555709 EAPPQ56P03 285 aaPredicted RBP15.13■□□□□ 0.01
MTHFD1-211ENST00000555709 ZNF790Q6PG37 636 aa15.13■□□□□ 0.01
MTHFD1-211ENST00000555709 CAPNS2Q96L46 248 aa15.13■□□□□ 0.01
MTHFD1-211ENST00000555709 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
MTHFD1-211ENST00000555709 NARFQ9UHQ1 456 aa15.13■□□□□ 0.01
MTHFD1-211ENST00000555709 ABT1Q9ULW3 272 aaKnown RBP15.13■□□□□ 0.01
MTHFD1-211ENST00000555709 CASP8AP2Q9UKL3 1982 aa15.13■□□□□ 0.01
MTHFD1-211ENST00000555709 KRT24Q2M2I5 525 aa15.12■□□□□ 0.01
MTHFD1-211ENST00000555709 PRPF38BQ5VTL8 546 aaKnown RBP15.12■□□□□ 0.01
MTHFD1-211ENST00000555709 MAP1SQ66K74 1059 aaPredicted RBP15.12■□□□□ 0.01
MTHFD1-211ENST00000555709 C8orf58Q8NAV2 365 aa15.12■□□□□ 0.01
MTHFD1-211ENST00000555709 BEGAINQ9BUH8 593 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms