RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 HDAC5Q9UQL6 1122 aa29.68■■■□□ 2.34
TMEM260-207ENST00000555497 GCKRQ14397 625 aa29.67■■■□□ 2.34
TMEM260-207ENST00000555497 RAB3GAP1Q15042 981 aa29.67■■■□□ 2.34
TMEM260-207ENST00000555497 ANKRD13DQ6ZTN6 518 aa29.67■■■□□ 2.34
TMEM260-207ENST00000555497 TNPO1Q92973 898 aaKnown RBP29.67■■■□□ 2.34
TMEM260-207ENST00000555497 USP42Q9H9J4 1324 aaKnown RBP29.67■■■□□ 2.34
TMEM260-207ENST00000555497 PCDH11XQ9BZA7 1347 aa29.66■■■□□ 2.34
TMEM260-207ENST00000555497 PCDH11YQ9BZA8 1340 aa29.66■■■□□ 2.34
TMEM260-207ENST00000555497 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.66■■■□□ 2.34
TMEM260-207ENST00000555497 NEXNQ0ZGT2 675 aa29.65■■■□□ 2.34
TMEM260-207ENST00000555497 ANO2Q9NQ90 1003 aa29.65■■■□□ 2.34
TMEM260-207ENST00000555497 PALD1Q9ULE6 856 aa29.65■■■□□ 2.34
TMEM260-207ENST00000555497 EPHA10Q5JZY3 1008 aa29.64■■■□□ 2.33
TMEM260-207ENST00000555497 CARD10Q9BWT7 1032 aa29.64■■■□□ 2.33
TMEM260-207ENST00000555497 CLASRPQ8N2M8 674 aaKnown RBP29.63■■■□□ 2.33
TMEM260-207ENST00000555497 STRN4Q9NRL3 753 aa29.63■■■□□ 2.33
TMEM260-207ENST00000555497 SASH1O94885 1247 aa29.62■■■□□ 2.33
TMEM260-207ENST00000555497 JARID2Q92833 1246 aaPredicted RBP29.62■■■□□ 2.33
TMEM260-207ENST00000555497 LAMB4A4D0S4 1761 aa29.62■■■□□ 2.33
TMEM260-207ENST00000555497 IL2RBP14784 551 aa29.61■■■□□ 2.33
TMEM260-207ENST00000555497 SHANK3Q9BYB0 1731 aa29.61■■■□□ 2.33
TMEM260-207ENST00000555497 TTC41PQ6P2S7 1318 aa29.61■■■□□ 2.33
TMEM260-207ENST00000555497 ST18O60284 1047 aa29.61■■■□□ 2.33
TMEM260-207ENST00000555497 ERC1Q8IUD2 1116 aa29.61■■■□□ 2.33
TMEM260-207ENST00000555497 NKX1-1Q15270 411 aaPredicted RBP29.6■■■□□ 2.33
TMEM260-207ENST00000555497 ARFGEF2Q9Y6D5 1785 aa29.6■■■□□ 2.33
TMEM260-207ENST00000555497 NHSL1Q5SYE7 1610 aa29.6■■■□□ 2.33
TMEM260-207ENST00000555497 NBPF26B4DH59 902 aa29.6■■■□□ 2.33
TMEM260-207ENST00000555497 NBPF14Q5TI25 921 aa29.6■■■□□ 2.33
TMEM260-207ENST00000555497 NBPF10Q6P3W6 841 aaKnown RBP29.6■■■□□ 2.33
TMEM260-207ENST00000555497 NBPF15Q8N660 670 aa29.6■■■□□ 2.33
TMEM260-207ENST00000555497 ERVV-2B6SEH9 535 aa29.59■■■□□ 2.33
TMEM260-207ENST00000555497 DDX54Q8TDD1 881 aaKnown RBP29.59■■■□□ 2.33
TMEM260-207ENST00000555497 KLHDC4Q8TBB5 520 aa29.59■■■□□ 2.33
TMEM260-207ENST00000555497 AFDNP55196 1824 aaKnown RBP29.59■■■□□ 2.33
TMEM260-207ENST00000555497 UBR2Q8IWV8 1755 aa29.58■■■□□ 2.33
TMEM260-207ENST00000555497 GLRX3O76003 335 aaKnown RBP29.58■■■□□ 2.33
TMEM260-207ENST00000555497 CNTROBQ8N137 903 aa29.58■■■□□ 2.33
TMEM260-207ENST00000555497 SSFA2P28290 1259 aa29.57■■■□□ 2.32
TMEM260-207ENST00000555497 NEK4P51957 841 aa29.57■■■□□ 2.32
TMEM260-207ENST00000555497 AACSQ86V21 672 aa29.57■■■□□ 2.32
TMEM260-207ENST00000555497 ECHDC1Q9NTX5 307 aa29.57■■■□□ 2.32
TMEM260-207ENST00000555497 ATP5J2-PTCD1G3V325 749 aa29.56■■■□□ 2.32
TMEM260-207ENST00000555497 PTCD1O75127 700 aaKnown RBP29.56■■■□□ 2.32
TMEM260-207ENST00000555497 EVA1CP58658 441 aa29.56■■■□□ 2.32
TMEM260-207ENST00000555497 G3BP1Q13283 466 aaKnown RBP eCLIP29.56■■■□□ 2.32
TMEM260-207ENST00000555497 SIL1Q9H173 461 aa29.56■■■□□ 2.32
TMEM260-207ENST00000555497 SGSM2O43147 1006 aa29.56■■■□□ 2.32
TMEM260-207ENST00000555497 IFIT2P09913 472 aaKnown RBP29.56■■■□□ 2.32
TMEM260-207ENST00000555497 EAF2Q96CJ1 260 aaPredicted RBP29.56■■■□□ 2.32
TMEM260-207ENST00000555497 KCPQ6ZWJ8 1503 aa29.56■■■□□ 2.32
TMEM260-207ENST00000555497 MCCP23508 829 aa29.55■■■□□ 2.32
TMEM260-207ENST00000555497 TRAK2O60296 914 aa29.55■■■□□ 2.32
TMEM260-207ENST00000555497 ANAPC15P60006 121 aa29.55■■■□□ 2.32
TMEM260-207ENST00000555497 PLBD2Q8NHP8 589 aa29.55■■■□□ 2.32
TMEM260-207ENST00000555497 IL17RAQ96F46 866 aa29.54■■■□□ 2.32
TMEM260-207ENST00000555497 PAPPAQ13219 1627 aa29.54■■■□□ 2.32
TMEM260-207ENST00000555497 ZGPATQ8N5A5 531 aaKnown RBP29.53■■■□□ 2.32
TMEM260-207ENST00000555497 DDX11L8A8MPP1 907 aa29.53■■■□□ 2.32
TMEM260-207ENST00000555497 UBE3BQ7Z3V4 1068 aa29.53■■■□□ 2.32
TMEM260-207ENST00000555497 CCDC8Q9H0W5 538 aaPredicted RBP29.52■■■□□ 2.32
TMEM260-207ENST00000555497 A1BGP04217 495 aa29.52■■■□□ 2.32
TMEM260-207ENST00000555497 TLR7Q9NYK1 1049 aaKnown RBP29.52■■■□□ 2.32
TMEM260-207ENST00000555497 HSPA4P34932 840 aa29.51■■■□□ 2.31
TMEM260-207ENST00000555497 TTLL7Q6ZT98 887 aa29.51■■■□□ 2.31
TMEM260-207ENST00000555497 CASP7P55210 303 aa29.51■■■□□ 2.31
TMEM260-207ENST00000555497 CWC27Q6UX04 472 aaKnown RBP29.51■■■□□ 2.31
TMEM260-207ENST00000555497 LSG1Q9H089 658 aaKnown RBP29.51■■■□□ 2.31
TMEM260-207ENST00000555497 ERBB4Q15303 1308 aa29.5■■■□□ 2.31
TMEM260-207ENST00000555497 EPB41L2O43491 1005 aaKnown RBP29.5■■■□□ 2.31
TMEM260-207ENST00000555497 RFX5P48382 616 aaPredicted RBP29.5■■■□□ 2.31
TMEM260-207ENST00000555497 GBP4Q96PP9 640 aa29.5■■■□□ 2.31
TMEM260-207ENST00000555497 TOGARAM1Q9Y4F4 1720 aa29.5■■■□□ 2.31
TMEM260-207ENST00000555497 A0A087WZG4 1122 aa29.49■■■□□ 2.31
TMEM260-207ENST00000555497 GPATCH3Q96I76 525 aa29.49■■■□□ 2.31
TMEM260-207ENST00000555497 RAD50Q92878 1312 aa29.48■■■□□ 2.31
TMEM260-207ENST00000555497 PKP1Q13835 747 aa29.48■■■□□ 2.31
TMEM260-207ENST00000555497 RABL6Q3YEC7 729 aaPredicted RBP29.48■■■□□ 2.31
TMEM260-207ENST00000555497 TMX3Q96JJ7 454 aa29.48■■■□□ 2.31
TMEM260-207ENST00000555497 GZF1Q9H116 711 aaPredicted RBP29.48■■■□□ 2.31
TMEM260-207ENST00000555497 TNS2Q63HR2 1409 aa29.48■■■□□ 2.31
TMEM260-207ENST00000555497 CYP2E1P05181 493 aaPredicted RBP29.47■■■□□ 2.31
TMEM260-207ENST00000555497 COPRSQ9NQ92 184 aa29.47■■■□□ 2.31
TMEM260-207ENST00000555497 COL15A1P39059 1388 aa29.47■■■□□ 2.31
TMEM260-207ENST00000555497 PTPN12Q05209 780 aaKnown RBP29.47■■■□□ 2.31
TMEM260-207ENST00000555497 UPF3BQ9BZI7 483 aaKnown RBP29.47■■■□□ 2.31
TMEM260-207ENST00000555497 CLEC17AQ6ZS10 378 aa29.46■■■□□ 2.31
TMEM260-207ENST00000555497 NUP188Q5SRE5 1749 aa29.46■■■□□ 2.31
TMEM260-207ENST00000555497 CWC22Q9HCG8 908 aaKnown RBP29.45■■■□□ 2.31
TMEM260-207ENST00000555497 BTG4Q9NY30 223 aa29.45■■■□□ 2.31
TMEM260-207ENST00000555497 EVI5LQ96CN4 794 aa29.44■■■□□ 2.3
TMEM260-207ENST00000555497 DIAPH3Q9NSV4 1193 aa29.44■■■□□ 2.3
TMEM260-207ENST00000555497 H7C1W4 665 aa29.43■■■□□ 2.3
TMEM260-207ENST00000555497 SNX14Q9Y5W7 946 aa29.43■■■□□ 2.3
TMEM260-207ENST00000555497 BAG4O95429 457 aaKnown RBP29.42■■■□□ 2.3
TMEM260-207ENST00000555497 MCM2P49736 904 aa29.42■■■□□ 2.3
TMEM260-207ENST00000555497 NUCB2P80303 420 aa29.42■■■□□ 2.3
TMEM260-207ENST00000555497 NOL8Q76FK4 1167 aaKnown RBP29.42■■■□□ 2.3
TMEM260-207ENST00000555497 RASEFQ8IZ41 740 aa29.42■■■□□ 2.3
TMEM260-207ENST00000555497 ZBTB3Q9H5J0 574 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms