RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 TOGARAM1Q9Y4F4 1720 aa17.87■□□□□ 0.45
IFT43-209ENST00000555305 ADAMTS2O95450 1211 aa17.86■□□□□ 0.45
IFT43-209ENST00000555305 RHPN1Q8TCX5 695 aa17.86■□□□□ 0.45
IFT43-209ENST00000555305 PIGBQ92521 554 aa17.86■□□□□ 0.45
IFT43-209ENST00000555305 SLIT2O94813 1529 aa17.86■□□□□ 0.45
IFT43-209ENST00000555305 UBAP1LF5GYI3 381 aa17.86■□□□□ 0.45
IFT43-209ENST00000555305 PTCD1O75127 700 aaKnown RBP17.86■□□□□ 0.45
IFT43-209ENST00000555305 SPATA31A5Q5VU36 1347 aa17.85■□□□□ 0.45
IFT43-209ENST00000555305 SPATA31A7Q8IWB4 1347 aa17.85■□□□□ 0.45
IFT43-209ENST00000555305 JCADQ9P266 1359 aa17.85■□□□□ 0.45
IFT43-209ENST00000555305 DDB1Q16531 1140 aa17.85■□□□□ 0.45
IFT43-209ENST00000555305 NBPF26B4DH59 902 aa17.84■□□□□ 0.45
IFT43-209ENST00000555305 SDSP20132 328 aa17.84■□□□□ 0.45
IFT43-209ENST00000555305 OS9Q13438 667 aaPredicted RBP17.84■□□□□ 0.45
IFT43-209ENST00000555305 NBPF14Q5TI25 921 aa17.84■□□□□ 0.45
IFT43-209ENST00000555305 NBPF10Q6P3W6 841 aaKnown RBP17.84■□□□□ 0.45
IFT43-209ENST00000555305 NBPF15Q8N660 670 aa17.84■□□□□ 0.45
IFT43-209ENST00000555305 OTUD7AQ8TE49 926 aaPredicted RBP17.84■□□□□ 0.45
IFT43-209ENST00000555305 ATG3Q9NT62 314 aa17.84■□□□□ 0.45
IFT43-209ENST00000555305 REC8O95072 547 aa17.83■□□□□ 0.44
IFT43-209ENST00000555305 CLASRPQ8N2M8 674 aaKnown RBP17.83■□□□□ 0.44
IFT43-209ENST00000555305 GPATCH3Q96I76 525 aa17.83■□□□□ 0.44
IFT43-209ENST00000555305 SUCLG2Q96I99 432 aa17.83■□□□□ 0.44
IFT43-209ENST00000555305 TTC41PQ6P2S7 1318 aa17.83■□□□□ 0.44
IFT43-209ENST00000555305 CCDC191Q8NCU4 936 aa17.82■□□□□ 0.44
IFT43-209ENST00000555305 BICC1Q9H694 974 aaKnown RBP17.82■□□□□ 0.44
IFT43-209ENST00000555305 ARFGEF2Q9Y6D5 1785 aa17.82■□□□□ 0.44
IFT43-209ENST00000555305 NUTM2BA6NNL0 878 aaPredicted RBP17.81■□□□□ 0.44
IFT43-209ENST00000555305 NUTM2EB1AL46 878 aaPredicted RBP17.81■□□□□ 0.44
IFT43-209ENST00000555305 G3BP1Q13283 466 aaKnown RBP eCLIP17.81■□□□□ 0.44
IFT43-209ENST00000555305 NUTM2AQ8IVF1 878 aaPredicted RBP17.81■□□□□ 0.44
IFT43-209ENST00000555305 SPATA31A6Q5VVP1 1343 aa17.81■□□□□ 0.44
IFT43-209ENST00000555305 USP42Q9H9J4 1324 aaKnown RBP17.81■□□□□ 0.44
IFT43-209ENST00000555305 ERC2O15083 957 aa17.81■□□□□ 0.44
IFT43-209ENST00000555305 KIF6Q6ZMV9 814 aa17.81■□□□□ 0.44
IFT43-209ENST00000555305 UNC5CLQ8IV45 518 aa17.81■□□□□ 0.44
IFT43-209ENST00000555305 CWC25Q9NXE8 425 aaPredicted RBP17.81■□□□□ 0.44
IFT43-209ENST00000555305 ASAP1Q9ULH1 1129 aa17.81■□□□□ 0.44
IFT43-209ENST00000555305 A0A087WZG4 1122 aa17.8■□□□□ 0.44
IFT43-209ENST00000555305 A1BGP04217 495 aa17.8■□□□□ 0.44
IFT43-209ENST00000555305 RABL6Q3YEC7 729 aaPredicted RBP17.8■□□□□ 0.44
IFT43-209ENST00000555305 EPB41L2O43491 1005 aaKnown RBP17.79■□□□□ 0.44
IFT43-209ENST00000555305 KAZALD1Q96I82 304 aa17.79■□□□□ 0.44
IFT43-209ENST00000555305 TRIM28Q13263 835 aaKnown RBP17.79■□□□□ 0.44
IFT43-209ENST00000555305 HSP90AB3PQ58FF7 597 aa17.79■□□□□ 0.44
IFT43-209ENST00000555305 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
IFT43-209ENST00000555305 BCL11AQ9H165 835 aa17.79■□□□□ 0.44
IFT43-209ENST00000555305 ITGB4P16144 1822 aa17.78■□□□□ 0.44
IFT43-209ENST00000555305 H7C1W4 665 aa17.78■□□□□ 0.44
IFT43-209ENST00000555305 PIP4K2AP48426 406 aaPredicted RBP17.78■□□□□ 0.44
IFT43-209ENST00000555305 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
IFT43-209ENST00000555305 IL1RAPL2Q9NP60 686 aa17.78■□□□□ 0.44
IFT43-209ENST00000555305 COPRSQ9NQ92 184 aa17.78■□□□□ 0.44
IFT43-209ENST00000555305 CCDC9Q9Y3X0 531 aaKnown RBP17.78■□□□□ 0.44
IFT43-209ENST00000555305 GLRX3O76003 335 aaKnown RBP17.77■□□□□ 0.44
IFT43-209ENST00000555305 VPS72Q15906 364 aa17.77■□□□□ 0.44
IFT43-209ENST00000555305 UBE3BQ7Z3V4 1068 aa17.77■□□□□ 0.44
IFT43-209ENST00000555305 DNAJC10Q8IXB1 793 aa17.77■□□□□ 0.44
IFT43-209ENST00000555305 NUP188Q5SRE5 1749 aa17.77■□□□□ 0.44
IFT43-209ENST00000555305 IFIT2P09913 472 aaKnown RBP17.76■□□□□ 0.43
IFT43-209ENST00000555305 TTLL7Q6ZT98 887 aa17.76■□□□□ 0.43
IFT43-209ENST00000555305 SNX21Q969T3 373 aa17.76■□□□□ 0.43
IFT43-209ENST00000555305 SYTL4Q96C24 671 aaPredicted RBP17.76■□□□□ 0.43
IFT43-209ENST00000555305 TRIM6-TRIM34B2RNG4 842 aa17.76■□□□□ 0.43
IFT43-209ENST00000555305 PRIM1P49642 420 aaKnown RBP17.76■□□□□ 0.43
IFT43-209ENST00000555305 TCIRG1Q13488 830 aa17.76■□□□□ 0.43
IFT43-209ENST00000555305 CNTROBQ8N137 903 aa17.76■□□□□ 0.43
IFT43-209ENST00000555305 AFDNP55196 1824 aaKnown RBP17.75■□□□□ 0.43
IFT43-209ENST00000555305 ATP5J2-PTCD1G3V325 749 aa17.75■□□□□ 0.43
IFT43-209ENST00000555305 CASP7P55210 303 aa17.75■□□□□ 0.43
IFT43-209ENST00000555305 HSCBQ8IWL3 235 aa17.75■□□□□ 0.43
IFT43-209ENST00000555305 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
IFT43-209ENST00000555305 NGLY1Q96IV0 654 aa17.75■□□□□ 0.43
IFT43-209ENST00000555305 ECHDC1Q9NTX5 307 aa17.75■□□□□ 0.43
IFT43-209ENST00000555305 CYP19A1P11511 503 aaPredicted RBP17.74■□□□□ 0.43
IFT43-209ENST00000555305 FNBP4Q8N3X1 1017 aaPredicted RBP17.74■□□□□ 0.43
IFT43-209ENST00000555305 ISCA1Q9BUE6 129 aa17.74■□□□□ 0.43
IFT43-209ENST00000555305 MAP3K15Q6ZN16 1313 aa17.74■□□□□ 0.43
IFT43-209ENST00000555305 IL6STP40189 918 aaPredicted RBP17.74■□□□□ 0.43
IFT43-209ENST00000555305 NUTM1Q86Y26 1132 aa17.74■□□□□ 0.43
IFT43-209ENST00000555305 PI4K2BQ8TCG2 481 aa17.74■□□□□ 0.43
IFT43-209ENST00000555305 USP26Q9BXU7 913 aa17.74■□□□□ 0.43
IFT43-209ENST00000555305 TBC1D2Q9BYX2 928 aa17.74■□□□□ 0.43
IFT43-209ENST00000555305 ZBTB3Q9H5J0 574 aa17.74■□□□□ 0.43
IFT43-209ENST00000555305 ERVV-1B6SEH8 477 aa17.73■□□□□ 0.43
IFT43-209ENST00000555305 RILPL2Q969X0 211 aa17.73■□□□□ 0.43
IFT43-209ENST00000555305 DOT1LQ8TEK3 1739 aa17.73■□□□□ 0.43
IFT43-209ENST00000555305 RABEP1Q15276 862 aa17.72■□□□□ 0.43
IFT43-209ENST00000555305 MARCH10Q8NA82 808 aaPredicted RBP17.72■□□□□ 0.43
IFT43-209ENST00000555305 CICQ96RK0 1608 aaPredicted RBP17.71■□□□□ 0.43
IFT43-209ENST00000555305 MCCP23508 829 aa17.71■□□□□ 0.43
IFT43-209ENST00000555305 CHMLP26374 656 aa17.71■□□□□ 0.43
IFT43-209ENST00000555305 GIGYF2Q6Y7W6 1299 aaKnown RBP17.71■□□□□ 0.43
IFT43-209ENST00000555305 AACSQ86V21 672 aa17.71■□□□□ 0.43
IFT43-209ENST00000555305 FBXO3Q9UK99 471 aa17.71■□□□□ 0.43
IFT43-209ENST00000555305 PA2G4Q9UQ80 394 aaKnown RBP17.71■□□□□ 0.43
IFT43-209ENST00000555305 BCL9LQ86UU0 1499 aa17.71■□□□□ 0.43
IFT43-209ENST00000555305 EPHA10Q5JZY3 1008 aa17.71■□□□□ 0.43
IFT43-209ENST00000555305 C8orf37Q96NL8 207 aa17.71■□□□□ 0.43
IFT43-209ENST00000555305 ESYT1Q9BSJ8 1104 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms