RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 BEGAINQ9BUH8 593 aa12.06□□□□□ -0.48
PRKCH-213ENST00000555185 BRIP1Q9BX63 1249 aa12.06□□□□□ -0.48
PRKCH-213ENST00000555185 LGR6Q9HBX8 967 aa12.06□□□□□ -0.48
PRKCH-213ENST00000555185 GPR101Q96P66 508 aaPredicted RBP12.05□□□□□ -0.48
PRKCH-213ENST00000555185 DDX21Q9NR30 783 aaKnown RBP eCLIP12.05□□□□□ -0.48
PRKCH-213ENST00000555185 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
PRKCH-213ENST00000555185 TRPM7Q96QT4 1865 aa12.04□□□□□ -0.48
PRKCH-213ENST00000555185 SCN7AQ01118 1682 aa12.04□□□□□ -0.48
PRKCH-213ENST00000555185 TRAF5O00463 557 aa12.04□□□□□ -0.48
PRKCH-213ENST00000555185 TBC1D2BQ9UPU7 963 aa12.04□□□□□ -0.48
PRKCH-213ENST00000555185 NPHP1O15259 732 aa12.03□□□□□ -0.48
PRKCH-213ENST00000555185 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
PRKCH-213ENST00000555185 SRGNP10124 158 aa12.03□□□□□ -0.48
PRKCH-213ENST00000555185 SOX10P56693 466 aa12.03□□□□□ -0.48
PRKCH-213ENST00000555185 DGKZQ13574 1117 aa12.03□□□□□ -0.48
PRKCH-213ENST00000555185 SULT6B1Q6IMI4 303 aa12.03□□□□□ -0.48
PRKCH-213ENST00000555185 CNKSR1Q969H4 720 aa12.03□□□□□ -0.48
PRKCH-213ENST00000555185 SLC52A2Q9HAB3 445 aa12.03□□□□□ -0.48
PRKCH-213ENST00000555185 EIF5P55010 431 aaKnown RBP12.02□□□□□ -0.49
PRKCH-213ENST00000555185 STYK1Q6J9G0 422 aa12.02□□□□□ -0.49
PRKCH-213ENST00000555185 CNBD1Q8NA66 436 aa12.02□□□□□ -0.49
PRKCH-213ENST00000555185 C7orf43Q8WVR3 580 aa12.02□□□□□ -0.49
PRKCH-213ENST00000555185 ECE1P42892 770 aa12.01□□□□□ -0.49
PRKCH-213ENST00000555185 CCDC93Q567U6 631 aa12.01□□□□□ -0.49
PRKCH-213ENST00000555185 CST9Q5W186 159 aa12.01□□□□□ -0.49
PRKCH-213ENST00000555185 PNMA8AQ86V59 439 aaPredicted RBP12.01□□□□□ -0.49
PRKCH-213ENST00000555185 MASTLQ96GX5 879 aa12.01□□□□□ -0.49
PRKCH-213ENST00000555185 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
PRKCH-213ENST00000555185 UBR2Q8IWV8 1755 aa12□□□□□ -0.49
PRKCH-213ENST00000555185 FKBP4Q02790 459 aaKnown RBP eCLIP12□□□□□ -0.49
PRKCH-213ENST00000555185 SOGA3Q5TF21 947 aa12□□□□□ -0.49
PRKCH-213ENST00000555185 GJA3Q9Y6H8 435 aa12□□□□□ -0.49
PRKCH-213ENST00000555185 MRC1P22897 1456 aa12□□□□□ -0.49
PRKCH-213ENST00000555185 COL4A5P29400 1685 aa12□□□□□ -0.49
PRKCH-213ENST00000555185 RNMTO43148 476 aaKnown RBP11.99□□□□□ -0.49
PRKCH-213ENST00000555185 ST5P78524 1137 aa11.99□□□□□ -0.49
PRKCH-213ENST00000555185 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
PRKCH-213ENST00000555185 POLR3GLQ9BT43 218 aa11.99□□□□□ -0.49
PRKCH-213ENST00000555185 FZD9O00144 591 aa11.98□□□□□ -0.49
PRKCH-213ENST00000555185 IARSP41252 1262 aaKnown RBP11.98□□□□□ -0.49
PRKCH-213ENST00000555185 EPS15P42566 896 aa11.98□□□□□ -0.49
PRKCH-213ENST00000555185 CDCA8Q53HL2 280 aa11.98□□□□□ -0.49
PRKCH-213ENST00000555185 SETDB2Q96T68 719 aa11.98□□□□□ -0.49
PRKCH-213ENST00000555185 TLL2Q9Y6L7 1015 aa11.98□□□□□ -0.49
PRKCH-213ENST00000555185 A0A087WZG4 1122 aa11.97□□□□□ -0.49
PRKCH-213ENST00000555185 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
PRKCH-213ENST00000555185 CIAPIN1Q6FI81 312 aa11.97□□□□□ -0.49
PRKCH-213ENST00000555185 SLC51AQ86UW1 340 aa11.97□□□□□ -0.49
PRKCH-213ENST00000555185 GPC2Q8N158 579 aa11.97□□□□□ -0.49
PRKCH-213ENST00000555185 SYNE4Q8N205 404 aa11.97□□□□□ -0.49
PRKCH-213ENST00000555185 ZIC5Q96T25 663 aa11.97□□□□□ -0.49
PRKCH-213ENST00000555185 BCORQ6W2J9 1755 aa11.97□□□□□ -0.49
PRKCH-213ENST00000555185 CAMTA2O94983 1202 aa11.96□□□□□ -0.49
PRKCH-213ENST00000555185 STARD3NLO95772 234 aa11.96□□□□□ -0.49
PRKCH-213ENST00000555185 A1BGP04217 495 aa11.96□□□□□ -0.49
PRKCH-213ENST00000555185 MAP2K2P36507 400 aa11.96□□□□□ -0.49
PRKCH-213ENST00000555185 SCNN1DP51172 638 aa11.96□□□□□ -0.49
PRKCH-213ENST00000555185 VSIG10Q8N0Z9 540 aa11.96□□□□□ -0.49
PRKCH-213ENST00000555185 FAM177BA6PVY3 158 aa11.95□□□□□ -0.5
PRKCH-213ENST00000555185 CELF2O95319 508 aaKnown RBP11.95□□□□□ -0.5
PRKCH-213ENST00000555185 NPR1P16066 1061 aa11.95□□□□□ -0.5
PRKCH-213ENST00000555185 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
PRKCH-213ENST00000555185 PRPF38BQ5VTL8 546 aaKnown RBP11.95□□□□□ -0.5
PRKCH-213ENST00000555185 SAPCD2Q86UD0 394 aa11.95□□□□□ -0.5
PRKCH-213ENST00000555185 ZNF496Q96IT1 587 aaPredicted RBP11.95□□□□□ -0.5
PRKCH-213ENST00000555185 HMOX1P09601 288 aa11.94□□□□□ -0.5
PRKCH-213ENST00000555185 IL13P35225 146 aa11.94□□□□□ -0.5
PRKCH-213ENST00000555185 NBPF5PQ86XG9 351 aaPredicted RBP11.94□□□□□ -0.5
PRKCH-213ENST00000555185 ZNF408Q9H9D4 720 aa11.94□□□□□ -0.5
PRKCH-213ENST00000555185 CA12O43570 354 aa11.93□□□□□ -0.5
PRKCH-213ENST00000555185 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
PRKCH-213ENST00000555185 EIF6P56537 245 aaKnown RBP11.93□□□□□ -0.5
PRKCH-213ENST00000555185 MTHFSDQ2M296 383 aaKnown RBP11.93□□□□□ -0.5
PRKCH-213ENST00000555185 RTKN2Q8IZC4 609 aa11.93□□□□□ -0.5
PRKCH-213ENST00000555185 TTC5Q8N0Z6 440 aa11.93□□□□□ -0.5
PRKCH-213ENST00000555185 GLIS2Q9BZE0 524 aaPredicted RBP11.93□□□□□ -0.5
PRKCH-213ENST00000555185 IL6STP40189 918 aaPredicted RBP11.92□□□□□ -0.5
PRKCH-213ENST00000555185 DZIP3Q86Y13 1208 aaKnown RBP11.92□□□□□ -0.5
PRKCH-213ENST00000555185 JDP2Q8WYK2 163 aa11.92□□□□□ -0.5
PRKCH-213ENST00000555185 SNED1Q8TER0 1413 aa11.92□□□□□ -0.5
PRKCH-213ENST00000555185 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
PRKCH-213ENST00000555185 DLK2Q6UY11 383 aa11.91□□□□□ -0.5
PRKCH-213ENST00000555185 TCERG1O14776 1098 aaKnown RBP11.9□□□□□ -0.5
PRKCH-213ENST00000555185 USP50Q70EL3 339 aaPredicted RBP11.9□□□□□ -0.5
PRKCH-213ENST00000555185 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
PRKCH-213ENST00000555185 KLRG2A4D1S0 409 aaPredicted RBP11.89□□□□□ -0.51
PRKCH-213ENST00000555185 KCNQ3O43525 872 aa11.89□□□□□ -0.51
PRKCH-213ENST00000555185 ZNF790Q6PG37 636 aa11.89□□□□□ -0.51
PRKCH-213ENST00000555185 NPM2Q86SE8 214 aaKnown RBP11.89□□□□□ -0.51
PRKCH-213ENST00000555185 MORC1Q86VD1 984 aa11.89□□□□□ -0.51
PRKCH-213ENST00000555185 LARGE2Q8N3Y3 721 aa11.89□□□□□ -0.51
PRKCH-213ENST00000555185 SIPA1L3O60292 1781 aaPredicted RBP11.89□□□□□ -0.51
PRKCH-213ENST00000555185 PSMD1Q99460 953 aa11.88□□□□□ -0.51
PRKCH-213ENST00000555185 PANK3Q9H999 370 aa11.88□□□□□ -0.51
PRKCH-213ENST00000555185 NIP7Q9Y221 180 aaKnown RBP eCLIP11.88□□□□□ -0.51
PRKCH-213ENST00000555185 IL17REQ8NFR9 667 aa11.87□□□□□ -0.51
PRKCH-213ENST00000555185 ADARB2Q9NS39 739 aaKnown RBP11.87□□□□□ -0.51
PRKCH-213ENST00000555185 GPRC5DQ9NZD1 345 aa11.87□□□□□ -0.51
PRKCH-213ENST00000555185 USP16Q9Y5T5 823 aa11.87□□□□□ -0.51
PRKCH-213ENST00000555185 ABCC12Q96J65 1359 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms