RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-208	ENST00000555094	ANKRD44	Q8N8A2	993 aa		13.64	□□□□□ -0.23
GABRB3-208	ENST00000555094	USP44	Q9H0E7	712 aa		13.64	□□□□□ -0.23
GABRB3-208	ENST00000555094	MYH14	Q7Z406	1995 aa	Known RBP	13.63	□□□□□ -0.23
GABRB3-208	ENST00000555094	CYP19A1	P11511	503 aa	Predicted RBP	13.63	□□□□□ -0.23
GABRB3-208	ENST00000555094	SMC5	Q8IY18	1101 aa		13.63	□□□□□ -0.23
GABRB3-208	ENST00000555094	LINS1	Q8NG48	757 aa		13.63	□□□□□ -0.23
GABRB3-208	ENST00000555094	STARD3NL	O95772	234 aa		13.62	□□□□□ -0.23
GABRB3-208	ENST00000555094	GNAI2	P04899	355 aa		13.62	□□□□□ -0.23
GABRB3-208	ENST00000555094	RIC3	Q7Z5B4	369 aa		13.62	□□□□□ -0.23
GABRB3-208	ENST00000555094	SMARCC1	Q92922	1105 aa	Predicted RBP	13.62	□□□□□ -0.23
GABRB3-208	ENST00000555094	TAF1L	Q8IZX4	1826 aa		13.62	□□□□□ -0.23
GABRB3-208	ENST00000555094	LOC102724428	A0A0B4J2F2	783 aa		13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	IGKV5-2	P06315	115 aa		13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	SIK1	P57059	783 aa		13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	FAM182B	Q5T319	152 aa		13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	TTLL7	Q6ZT98	887 aa		13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	ANKRD13D	Q6ZTN6	518 aa		13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	PTF1A	Q7RTS3	328 aa		13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	PLBD2	Q8NHP8	589 aa		13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	METTL22	Q9BUU2	404 aa	Predicted RBP	13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	UBTFL1	P0CB47	393 aa	Predicted RBP	13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	CWF19L2	Q2TBE0	894 aa	Known RBP	13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	ZNF772	Q68DY9	489 aa	Predicted RBP	13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	PDZRN3	Q9UPQ7	1066 aa		13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	LRRFIP2	Q9Y608	721 aa	Known RBP	13.61	□□□□□ -0.23
GABRB3-208	ENST00000555094	BCOR	Q6W2J9	1755 aa		13.6	□□□□□ -0.23
GABRB3-208	ENST00000555094	UTY	O14607	1347 aa		13.6	□□□□□ -0.23
GABRB3-208	ENST00000555094	NEURL1B	A8MQ27	555 aa		13.6	□□□□□ -0.23
GABRB3-208	ENST00000555094	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.6	□□□□□ -0.23
GABRB3-208	ENST00000555094	ATXN8OS	P0DMR3	200 aa		13.6	□□□□□ -0.23
GABRB3-208	ENST00000555094	ITPK1	Q13572	414 aa		13.6	□□□□□ -0.23
GABRB3-208	ENST00000555094	MYD88	Q99836	296 aa		13.6	□□□□□ -0.23
GABRB3-208	ENST00000555094	ZBTB1	Q9Y2K1	713 aa		13.6	□□□□□ -0.23
GABRB3-208	ENST00000555094	NUP98	P52948	1817 aa		13.59	□□□□□ -0.23
GABRB3-208	ENST00000555094	NEXN	Q0ZGT2	675 aa		13.59	□□□□□ -0.23
GABRB3-208	ENST00000555094	GCC1	Q96CN9	775 aa		13.59	□□□□□ -0.23
GABRB3-208	ENST00000555094	MYCN	P04198	464 aa	Predicted RBP	13.58	□□□□□ -0.24
GABRB3-208	ENST00000555094	ATP6V1A	P38606	617 aa		13.58	□□□□□ -0.24
GABRB3-208	ENST00000555094	RBM6	P78332	1123 aa	Known RBP	13.58	□□□□□ -0.24
GABRB3-208	ENST00000555094	SCN7A	Q01118	1682 aa		13.57	□□□□□ -0.24
GABRB3-208	ENST00000555094	GRM8	O00222	908 aa		13.57	□□□□□ -0.24
GABRB3-208	ENST00000555094	CRKL	P46109	303 aa	Known RBP	13.57	□□□□□ -0.24
GABRB3-208	ENST00000555094	NUCB1	Q02818	461 aa		13.57	□□□□□ -0.24
GABRB3-208	ENST00000555094	GCKR	Q14397	625 aa		13.57	□□□□□ -0.24
GABRB3-208	ENST00000555094	INTS5	Q6P9B9	1019 aa	Known RBP	13.57	□□□□□ -0.24
GABRB3-208	ENST00000555094	ZBTB3	Q9H5J0	574 aa		13.57	□□□□□ -0.24
GABRB3-208	ENST00000555094	CCDC87	Q9NVE4	849 aa		13.57	□□□□□ -0.24
GABRB3-208	ENST00000555094	HMMR	O75330	724 aa		13.56	□□□□□ -0.24
GABRB3-208	ENST00000555094	IL6ST	P40189	918 aa	Predicted RBP	13.56	□□□□□ -0.24
GABRB3-208	ENST00000555094	RGS3	P49796	1198 aa		13.56	□□□□□ -0.24
GABRB3-208	ENST00000555094	ATP8B2	P98198	1209 aa		13.56	□□□□□ -0.24
GABRB3-208	ENST00000555094	KRT27	Q7Z3Y8	459 aa		13.56	□□□□□ -0.24
GABRB3-208	ENST00000555094	DCTPP1	Q9H773	170 aa		13.56	□□□□□ -0.24
GABRB3-208	ENST00000555094	TSHZ2	Q9NRE2	1034 aa		13.56	□□□□□ -0.24
GABRB3-208	ENST00000555094	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.56	□□□□□ -0.24
GABRB3-208	ENST00000555094	MAP3K15	Q6ZN16	1313 aa		13.56	□□□□□ -0.24
GABRB3-208	ENST00000555094	COL15A1	P39059	1388 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	PNMA6E	A0A0J9YXQ4	647 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	ATP5J2-PTCD1	G3V325	749 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	PDE4A	P27815	886 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	KIF6	Q6ZMV9	814 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	LINC00116	Q8NCU8	138 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	C4B	P0C0L5	1744 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	EIF5	P55010	431 aa	Known RBP	13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	MTX1	Q13505	466 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	POLA2	Q14181	598 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	SSH3	Q8TE77	659 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	KAZALD1	Q96I82	304 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	SUCLG2	Q96I99	432 aa		13.55	□□□□□ -0.24
GABRB3-208	ENST00000555094	CNTNAP4	Q9C0A0	1308 aa		13.54	□□□□□ -0.24
GABRB3-208	ENST00000555094	C4A	P0C0L4	1744 aa		13.54	□□□□□ -0.24
GABRB3-208	ENST00000555094	TNS1	Q9HBL0	1735 aa	Known RBP	13.54	□□□□□ -0.24
GABRB3-208	ENST00000555094	CASP7	P55210	303 aa		13.54	□□□□□ -0.24
GABRB3-208	ENST00000555094	CHD1L	Q86WJ1	897 aa		13.54	□□□□□ -0.24
GABRB3-208	ENST00000555094	ISCA1	Q9BUE6	129 aa		13.54	□□□□□ -0.24
GABRB3-208	ENST00000555094	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.54	□□□□□ -0.24
GABRB3-208	ENST00000555094	TCIRG1	Q13488	830 aa		13.53	□□□□□ -0.24
GABRB3-208	ENST00000555094	FAM196A	Q6ZSG2	479 aa		13.53	□□□□□ -0.24
GABRB3-208	ENST00000555094	PPP1R42	Q7Z4L9	355 aa		13.53	□□□□□ -0.24
GABRB3-208	ENST00000555094	LNPK	Q9C0E8	428 aa		13.53	□□□□□ -0.24
GABRB3-208	ENST00000555094	RGS17	Q9UGC6	210 aa	Predicted RBP	13.53	□□□□□ -0.24
GABRB3-208	ENST00000555094	HDAC5	Q9UQL6	1122 aa		13.53	□□□□□ -0.24
GABRB3-208	ENST00000555094	EP400	Q96L91	3159 aa		13.53	□□□□□ -0.24
GABRB3-208	ENST00000555094	KCNQ4	P56696	695 aa		13.52	□□□□□ -0.25
GABRB3-208	ENST00000555094	ANKRD45	Q5TZF3	282 aa		13.52	□□□□□ -0.25
GABRB3-208	ENST00000555094	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.52	□□□□□ -0.25
GABRB3-208	ENST00000555094	CCDC191	Q8NCU4	936 aa		13.52	□□□□□ -0.25
GABRB3-208	ENST00000555094	CWC25	Q9NXE8	425 aa	Predicted RBP	13.52	□□□□□ -0.25
GABRB3-208	ENST00000555094	LAMB2	P55268	1798 aa		13.51	□□□□□ -0.25
GABRB3-208	ENST00000555094		A0A087WZG4	1122 aa		13.51	□□□□□ -0.25
GABRB3-208	ENST00000555094	ERVV-1	B6SEH8	477 aa		13.51	□□□□□ -0.25
GABRB3-208	ENST00000555094	SRGAP3	O43295	1099 aa		13.51	□□□□□ -0.25
GABRB3-208	ENST00000555094	TRIM28	Q13263	835 aa	Known RBP	13.51	□□□□□ -0.25
GABRB3-208	ENST00000555094	HLF	Q16534	295 aa		13.51	□□□□□ -0.25
GABRB3-208	ENST00000555094	UBE3B	Q7Z3V4	1068 aa		13.51	□□□□□ -0.25
GABRB3-208	ENST00000555094	DZIP3	Q86Y13	1208 aa	Known RBP	13.51	□□□□□ -0.25
GABRB3-208	ENST00000555094	BICC1	Q9H694	974 aa	Known RBP	13.51	□□□□□ -0.25
GABRB3-208	ENST00000555094	CCNL1	Q9UK58	526 aa	Predicted RBP	13.51	□□□□□ -0.25

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