RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
PRKCH-211ENST00000555082 NBPF10Q6P3W6 841 aaKnown RBP12.2□□□□□ -0.46
PRKCH-211ENST00000555082 COPS6Q7L5N1 327 aa12.2□□□□□ -0.46
PRKCH-211ENST00000555082 NBPF15Q8N660 670 aa12.2□□□□□ -0.46
PRKCH-211ENST00000555082 GJD4Q96KN9 370 aaPredicted RBP12.2□□□□□ -0.46
PRKCH-211ENST00000555082 DDX21Q9NR30 783 aaKnown RBP eCLIP12.2□□□□□ -0.46
PRKCH-211ENST00000555082 SIRT2Q8IXJ6 389 aa12.19□□□□□ -0.46
PRKCH-211ENST00000555082 MAP3K2Q9Y2U5 619 aa12.19□□□□□ -0.46
PRKCH-211ENST00000555082 ADCY9O60503 1353 aa12.19□□□□□ -0.46
PRKCH-211ENST00000555082 KCNQ4P56696 695 aa12.19□□□□□ -0.46
PRKCH-211ENST00000555082 DDIT3P35638 169 aa12.18□□□□□ -0.46
PRKCH-211ENST00000555082 HDAC1Q13547 482 aaPredicted RBP12.18□□□□□ -0.46
PRKCH-211ENST00000555082 GBP4Q96PP9 640 aa12.18□□□□□ -0.46
PRKCH-211ENST00000555082 QTRT2Q9H974 415 aaKnown RBP12.18□□□□□ -0.46
PRKCH-211ENST00000555082 CWF19L2Q2TBE0 894 aaKnown RBP12.18□□□□□ -0.46
PRKCH-211ENST00000555082 LRP10Q7Z4F1 713 aa12.18□□□□□ -0.46
PRKCH-211ENST00000555082 DNAAF4Q8WXU2 420 aa12.18□□□□□ -0.46
PRKCH-211ENST00000555082 C5P01031 1676 aa12.18□□□□□ -0.46
PRKCH-211ENST00000555082 BCL9O00512 1426 aa12.18□□□□□ -0.46
PRKCH-211ENST00000555082 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
PRKCH-211ENST00000555082 ANKRD45Q5TZF3 282 aa12.17□□□□□ -0.46
PRKCH-211ENST00000555082 SMC5Q8IY18 1101 aa12.17□□□□□ -0.46
PRKCH-211ENST00000555082 KCPQ6ZWJ8 1503 aa12.17□□□□□ -0.46
PRKCH-211ENST00000555082 NWD2Q9ULI1 1742 aa12.17□□□□□ -0.46
PRKCH-211ENST00000555082 RBM10P98175 930 aaKnown RBP12.17□□□□□ -0.46
PRKCH-211ENST00000555082 HYPKQ9NX55 129 aa12.17□□□□□ -0.46
PRKCH-211ENST00000555082 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
PRKCH-211ENST00000555082 RAB3GAP1Q15042 981 aa12.17□□□□□ -0.46
PRKCH-211ENST00000555082 TTLL7Q6ZT98 887 aa12.17□□□□□ -0.46
PRKCH-211ENST00000555082 KIAA1211Q6ZU35 1233 aa12.17□□□□□ -0.46
PRKCH-211ENST00000555082 JARID2Q92833 1246 aaPredicted RBP12.17□□□□□ -0.46
PRKCH-211ENST00000555082 BEND3Q5T5X7 828 aa12.16□□□□□ -0.46
PRKCH-211ENST00000555082 GLI3P10071 1580 aa12.16□□□□□ -0.46
PRKCH-211ENST00000555082 RBM25P49756 843 aaKnown RBP12.16□□□□□ -0.46
PRKCH-211ENST00000555082 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
PRKCH-211ENST00000555082 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
PRKCH-211ENST00000555082 NBPF7P0C2Y1 421 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-211ENST00000555082 KSR2Q6VAB6 950 aa12.15□□□□□ -0.46
PRKCH-211ENST00000555082 CHD1LQ86WJ1 897 aa12.15□□□□□ -0.46
PRKCH-211ENST00000555082 SEPT12Q8IYM1 358 aa12.15□□□□□ -0.46
PRKCH-211ENST00000555082 KIF2CQ99661 725 aa12.15□□□□□ -0.46
PRKCH-211ENST00000555082 SRCIN1Q9C0H9 1055 aa12.15□□□□□ -0.46
PRKCH-211ENST00000555082 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-211ENST00000555082 EP400Q96L91 3159 aa12.15□□□□□ -0.46
PRKCH-211ENST00000555082 NASPP49321 788 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-211ENST00000555082 NUCB1Q02818 461 aa12.15□□□□□ -0.46
PRKCH-211ENST00000555082 SNX21Q969T3 373 aa12.15□□□□□ -0.46
PRKCH-211ENST00000555082 DDX49Q9Y6V7 483 aaKnown RBP12.15□□□□□ -0.46
PRKCH-211ENST00000555082 ATP5J2-PTCD1G3V325 749 aa12.14□□□□□ -0.47
PRKCH-211ENST00000555082 ARID3AQ99856 593 aa12.14□□□□□ -0.47
PRKCH-211ENST00000555082 ZBTB3Q9H5J0 574 aa12.14□□□□□ -0.47
PRKCH-211ENST00000555082 APBB1O00213 710 aa12.14□□□□□ -0.47
PRKCH-211ENST00000555082 MYD88Q99836 296 aa12.14□□□□□ -0.47
PRKCH-211ENST00000555082 LRRFIP2Q9Y608 721 aaKnown RBP12.14□□□□□ -0.47
PRKCH-211ENST00000555082 CEP85Q6P2H3 762 aa12.14□□□□□ -0.47
PRKCH-211ENST00000555082 WNK3Q9BYP7 1800 aa12.13□□□□□ -0.47
PRKCH-211ENST00000555082 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
PRKCH-211ENST00000555082 ANKRD13DQ6ZTN6 518 aa12.13□□□□□ -0.47
PRKCH-211ENST00000555082 SMIM5Q71RC9 77 aa12.13□□□□□ -0.47
PRKCH-211ENST00000555082 TBC1D9Q6ZT07 1266 aa12.13□□□□□ -0.47
PRKCH-211ENST00000555082 ZBTB1Q9Y2K1 713 aa12.13□□□□□ -0.47
PRKCH-211ENST00000555082 K7ELQ4 463 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-211ENST00000555082 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-211ENST00000555082 CHMP4AQ9BY43 222 aa12.12□□□□□ -0.47
PRKCH-211ENST00000555082 CIZ1Q9ULV3 898 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-211ENST00000555082 ATRNO75882 1429 aa12.12□□□□□ -0.47
PRKCH-211ENST00000555082 DOT1LQ8TEK3 1739 aa12.12□□□□□ -0.47
PRKCH-211ENST00000555082 ITGB4P16144 1822 aa12.12□□□□□ -0.47
PRKCH-211ENST00000555082 PNMA6EA0A0J9YXQ4 647 aa12.12□□□□□ -0.47
PRKCH-211ENST00000555082 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
PRKCH-211ENST00000555082 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
PRKCH-211ENST00000555082 ITPK1Q13572 414 aa12.12□□□□□ -0.47
PRKCH-211ENST00000555082 MCTP1Q6DN14 999 aa12.12□□□□□ -0.47
PRKCH-211ENST00000555082 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
PRKCH-211ENST00000555082 ATP10DQ9P241 1426 aa12.12□□□□□ -0.47
PRKCH-211ENST00000555082 UBTFL1P0CB47 393 aaPredicted RBP12.11□□□□□ -0.47
PRKCH-211ENST00000555082 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
PRKCH-211ENST00000555082 AK9Q5TCS8 1911 aa12.11□□□□□ -0.47
PRKCH-211ENST00000555082 LOC102724428A0A0B4J2F2 783 aa12.11□□□□□ -0.47
PRKCH-211ENST00000555082 GNAI2P04899 355 aa12.11□□□□□ -0.47
PRKCH-211ENST00000555082 SIK1P57059 783 aa12.11□□□□□ -0.47
PRKCH-211ENST00000555082 CAVIN1Q6NZI2 390 aaKnown RBP12.11□□□□□ -0.47
PRKCH-211ENST00000555082 ANKRD44Q8N8A2 993 aa12.11□□□□□ -0.47
PRKCH-211ENST00000555082 CHAMP1Q96JM3 812 aa12.11□□□□□ -0.47
PRKCH-211ENST00000555082 PALLDQ8WX93 1383 aa12.11□□□□□ -0.47
PRKCH-211ENST00000555082 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
PRKCH-211ENST00000555082 TPM2P07951 284 aa12.1□□□□□ -0.47
PRKCH-211ENST00000555082 ANP32BQ92688 251 aaKnown RBP12.1□□□□□ -0.47
PRKCH-211ENST00000555082 CHMP4BQ9H444 224 aaKnown RBP12.1□□□□□ -0.47
PRKCH-211ENST00000555082 CCDC173Q0VFZ6 552 aa12.1□□□□□ -0.47
PRKCH-211ENST00000555082 C9orf78Q9NZ63 289 aaPredicted RBP12.1□□□□□ -0.47
PRKCH-211ENST00000555082 R3HCC1Q9Y3T6 440 aaKnown RBP12.1□□□□□ -0.47
PRKCH-211ENST00000555082 PAPPAQ13219 1627 aa12.1□□□□□ -0.47
PRKCH-211ENST00000555082 GOLGA6L22H0YM25 854 aa12.1□□□□□ -0.47
PRKCH-211ENST00000555082 STARD3NLO95772 234 aa12.1□□□□□ -0.47
PRKCH-211ENST00000555082 MSNP26038 577 aaKnown RBP12.1□□□□□ -0.47
PRKCH-211ENST00000555082 ZSCAN30Q86W11 494 aa12.1□□□□□ -0.47
PRKCH-211ENST00000555082 METTL22Q9BUU2 404 aaPredicted RBP12.1□□□□□ -0.47
PRKCH-211ENST00000555082 UBR2Q8IWV8 1755 aa12.09□□□□□ -0.47
PRKCH-211ENST00000555082 SMARCA5O60264 1052 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms