RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 DICER1Q9UPY3 1922 aaKnown RBP20.87■□□□□ 0.93
ARHGEF40-205ENST00000555052 GLTPD2A6NH11 291 aa20.87■□□□□ 0.93
ARHGEF40-205ENST00000555052 SLX4Q8IY92 1834 aa20.87■□□□□ 0.93
ARHGEF40-205ENST00000555052 ARFGEF2Q9Y6D5 1785 aa20.87■□□□□ 0.93
ARHGEF40-205ENST00000555052 RGL2O15211 777 aa20.86■□□□□ 0.93
ARHGEF40-205ENST00000555052 SRGNP10124 158 aa20.86■□□□□ 0.93
ARHGEF40-205ENST00000555052 ST5P78524 1137 aa20.86■□□□□ 0.93
ARHGEF40-205ENST00000555052 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
ARHGEF40-205ENST00000555052 LAMB4A4D0S4 1761 aa20.86■□□□□ 0.93
ARHGEF40-205ENST00000555052 KDM3BQ7LBC6 1761 aa20.85■□□□□ 0.93
ARHGEF40-205ENST00000555052 C21orf2O43822 256 aa20.85■□□□□ 0.93
ARHGEF40-205ENST00000555052 STYK1Q6J9G0 422 aa20.85■□□□□ 0.93
ARHGEF40-205ENST00000555052 LTBP3Q9NS15 1303 aa20.84■□□□□ 0.93
ARHGEF40-205ENST00000555052 IFFO2Q5TF58 517 aa20.84■□□□□ 0.93
ARHGEF40-205ENST00000555052 CNKSR1Q969H4 720 aa20.84■□□□□ 0.93
ARHGEF40-205ENST00000555052 PLEKHF1Q96S99 279 aa20.84■□□□□ 0.93
ARHGEF40-205ENST00000555052 ZNF652Q9Y2D9 606 aa20.84■□□□□ 0.93
ARHGEF40-205ENST00000555052 PRPF40BQ6NWY9 871 aaKnown RBP20.83■□□□□ 0.93
ARHGEF40-205ENST00000555052 NBPF5PQ86XG9 351 aaPredicted RBP20.83■□□□□ 0.93
ARHGEF40-205ENST00000555052 MASTLQ96GX5 879 aa20.83■□□□□ 0.93
ARHGEF40-205ENST00000555052 MIS18AQ9NYP9 233 aa20.83■□□□□ 0.93
ARHGEF40-205ENST00000555052 ZNF219Q9P2Y4 722 aaPredicted RBP20.83■□□□□ 0.93
ARHGEF40-205ENST00000555052 CACNA1SQ13698 1873 aa20.83■□□□□ 0.92
ARHGEF40-205ENST00000555052 KLRG2A4D1S0 409 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF40-205ENST00000555052 NPHP1O15259 732 aa20.82■□□□□ 0.92
ARHGEF40-205ENST00000555052 VEGFAP15692 232 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF40-205ENST00000555052 SMC1BQ8NDV3 1235 aa20.82■□□□□ 0.92
ARHGEF40-205ENST00000555052 HTRA3P83110 453 aa20.81■□□□□ 0.92
ARHGEF40-205ENST00000555052 TAOK3Q9H2K8 898 aa20.81■□□□□ 0.92
ARHGEF40-205ENST00000555052 POTECB2RU33 542 aa20.8■□□□□ 0.92
ARHGEF40-205ENST00000555052 NFE2L2Q16236 605 aa20.8■□□□□ 0.92
ARHGEF40-205ENST00000555052 C7orf43Q8WVR3 580 aa20.8■□□□□ 0.92
ARHGEF40-205ENST00000555052 HLFQ16534 295 aa20.79■□□□□ 0.92
ARHGEF40-205ENST00000555052 PNISRQ8TF01 805 aaKnown RBP20.79■□□□□ 0.92
ARHGEF40-205ENST00000555052 NIP7Q9Y221 180 aaKnown RBP eCLIP20.79■□□□□ 0.92
ARHGEF40-205ENST00000555052 NEFMP07197 916 aa20.78■□□□□ 0.92
ARHGEF40-205ENST00000555052 EIF4A1P60842 406 aaKnown RBP20.78■□□□□ 0.92
ARHGEF40-205ENST00000555052 ERFEQ4G0M1 354 aa20.78■□□□□ 0.92
ARHGEF40-205ENST00000555052 SOGA3Q5TF21 947 aa20.78■□□□□ 0.92
ARHGEF40-205ENST00000555052 KLRG1Q96E93 195 aa20.78■□□□□ 0.92
ARHGEF40-205ENST00000555052 NPR1P16066 1061 aa20.77■□□□□ 0.92
ARHGEF40-205ENST00000555052 TPTE2Q6XPS3 522 aa20.77■□□□□ 0.92
ARHGEF40-205ENST00000555052 THUMPD2Q9BTF0 503 aaKnown RBP20.77■□□□□ 0.92
ARHGEF40-205ENST00000555052 DPY19L2Q6NUT2 758 aa20.76■□□□□ 0.91
ARHGEF40-205ENST00000555052 JMYQ8N9B5 988 aa20.76■□□□□ 0.91
ARHGEF40-205ENST00000555052 NUP98P52948 1817 aa20.76■□□□□ 0.91
ARHGEF40-205ENST00000555052 ERVV-1B6SEH8 477 aa20.74■□□□□ 0.91
ARHGEF40-205ENST00000555052 CCDC93Q567U6 631 aa20.74■□□□□ 0.91
ARHGEF40-205ENST00000555052 ABCC12Q96J65 1359 aa20.73■□□□□ 0.91
ARHGEF40-205ENST00000555052 PNNQ9H307 717 aaKnown RBP20.73■□□□□ 0.91
ARHGEF40-205ENST00000555052 MAP3K15Q6ZN16 1313 aa20.73■□□□□ 0.91
ARHGEF40-205ENST00000555052 MAPK8IP3Q9UPT6 1336 aa20.73■□□□□ 0.91
ARHGEF40-205ENST00000555052 FAM177BA6PVY3 158 aa20.72■□□□□ 0.91
ARHGEF40-205ENST00000555052 TTLL7Q6ZT98 887 aa20.72■□□□□ 0.91
ARHGEF40-205ENST00000555052 RIC1Q4ADV7 1423 aa20.71■□□□□ 0.91
ARHGEF40-205ENST00000555052 SNED1Q8TER0 1413 aa20.71■□□□□ 0.91
ARHGEF40-205ENST00000555052 CRY2Q49AN0 593 aa20.71■□□□□ 0.91
ARHGEF40-205ENST00000555052 OLFM4Q6UX06 510 aa20.71■□□□□ 0.91
ARHGEF40-205ENST00000555052 NGEFQ8N5V2 710 aa20.71■□□□□ 0.91
ARHGEF40-205ENST00000555052 IBTKQ9P2D0 1353 aaPredicted RBP20.71■□□□□ 0.91
ARHGEF40-205ENST00000555052 DDNO94850 711 aaPredicted RBP20.7■□□□□ 0.9
ARHGEF40-205ENST00000555052 FKBP4Q02790 459 aaKnown RBP eCLIP20.7■□□□□ 0.9
ARHGEF40-205ENST00000555052 RRP7AQ9Y3A4 280 aaKnown RBP20.7■□□□□ 0.9
ARHGEF40-205ENST00000555052 ERBB4Q15303 1308 aa20.7■□□□□ 0.9
ARHGEF40-205ENST00000555052 RALBP1Q15311 655 aa20.69■□□□□ 0.9
ARHGEF40-205ENST00000555052 L3MBTL3Q96JM7 780 aaPredicted RBP20.69■□□□□ 0.9
ARHGEF40-205ENST00000555052 NYXQ9GZU5 481 aa20.69■□□□□ 0.9
ARHGEF40-205ENST00000555052 UBN2Q6ZU65 1347 aa20.69■□□□□ 0.9
ARHGEF40-205ENST00000555052 MYL6BP14649 208 aa20.68■□□□□ 0.9
ARHGEF40-205ENST00000555052 KIF6Q6ZMV9 814 aa20.68■□□□□ 0.9
ARHGEF40-205ENST00000555052 LRP10Q7Z4F1 713 aa20.68■□□□□ 0.9
ARHGEF40-205ENST00000555052 NUTM1Q86Y26 1132 aa20.68■□□□□ 0.9
ARHGEF40-205ENST00000555052 SCN4AP35499 1836 aa20.67■□□□□ 0.9
ARHGEF40-205ENST00000555052 GTF2E1P29083 439 aaPredicted RBP20.67■□□□□ 0.9
ARHGEF40-205ENST00000555052 ALDH1B1P30837 517 aa20.67■□□□□ 0.9
ARHGEF40-205ENST00000555052 RTKN2Q8IZC4 609 aa20.67■□□□□ 0.9
ARHGEF40-205ENST00000555052 ZNF277Q9NRM2 450 aaPredicted RBP20.67■□□□□ 0.9
ARHGEF40-205ENST00000555052 TSPYL4Q9UJ04 414 aa20.67■□□□□ 0.9
ARHGEF40-205ENST00000555052 POTEIP0CG38 1075 aa20.66■□□□□ 0.9
ARHGEF40-205ENST00000555052 POTEJP0CG39 1038 aa20.66■□□□□ 0.9
ARHGEF40-205ENST00000555052 ZNF34Q8IZ26 560 aa20.66■□□□□ 0.9
ARHGEF40-205ENST00000555052 ZBTB3Q9H5J0 574 aa20.66■□□□□ 0.9
ARHGEF40-205ENST00000555052 ZNF541Q9H0D2 1346 aa20.65■□□□□ 0.9
ARHGEF40-205ENST00000555052 GPTP24298 496 aa20.65■□□□□ 0.9
ARHGEF40-205ENST00000555052 RIPK4P57078 832 aa20.65■□□□□ 0.9
ARHGEF40-205ENST00000555052 PDIA6Q15084 440 aa20.65■□□□□ 0.9
ARHGEF40-205ENST00000555052 CHADLQ6NUI6 762 aa20.65■□□□□ 0.9
ARHGEF40-205ENST00000555052 GIGYF2Q6Y7W6 1299 aaKnown RBP20.65■□□□□ 0.9
ARHGEF40-205ENST00000555052 BABAM1Q9NWV8 329 aa20.65■□□□□ 0.9
ARHGEF40-205ENST00000555052 NTSR2O95665 410 aa20.64■□□□□ 0.89
ARHGEF40-205ENST00000555052 HOXA10P31260 410 aaPredicted RBP20.64■□□□□ 0.89
ARHGEF40-205ENST00000555052 TMPOP42166 694 aaKnown RBP20.64■□□□□ 0.89
ARHGEF40-205ENST00000555052 SUSD4Q5VX71 490 aa20.64■□□□□ 0.89
ARHGEF40-205ENST00000555052 IQCA1LA6NCM1 817 aa20.63■□□□□ 0.89
ARHGEF40-205ENST00000555052 PSMD1Q99460 953 aa20.63■□□□□ 0.89
ARHGEF40-205ENST00000555052 TAF1DQ9H5J8 278 aaPredicted RBP20.63■□□□□ 0.89
ARHGEF40-205ENST00000555052 FZD9O00144 591 aa20.62■□□□□ 0.89
ARHGEF40-205ENST00000555052 IARSP41252 1262 aaKnown RBP20.62■□□□□ 0.89
ARHGEF40-205ENST00000555052 PROSER3Q2NL68 480 aa20.62■□□□□ 0.89
ARHGEF40-205ENST00000555052 SYNE4Q8N205 404 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms