RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, human

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-208	ENST00000554929	MAP2K1	Q02750	393 aa	Predicted RBP	13.81	□□□□□ -0.2
SRSF5-208	ENST00000554929	EFCAB3	Q8N7B9	438 aa		13.81	□□□□□ -0.2
SRSF5-208	ENST00000554929	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.81	□□□□□ -0.2
SRSF5-208	ENST00000554929	ZFP91	Q96JP5	570 aa	Predicted RBP	13.81	□□□□□ -0.2
SRSF5-208	ENST00000554929	CD163L1	Q9NR16	1453 aa		13.8	□□□□□ -0.2
SRSF5-208	ENST00000554929	TMOD3	Q9NYL9	352 aa		13.8	□□□□□ -0.2
SRSF5-208	ENST00000554929	TIAM2	Q8IVF5	1701 aa		13.8	□□□□□ -0.2
SRSF5-208	ENST00000554929	FAM9B	Q8IZU0	186 aa		13.79	□□□□□ -0.2
SRSF5-208	ENST00000554929	POLR3GL	Q9BT43	218 aa		13.79	□□□□□ -0.2
SRSF5-208	ENST00000554929	SLC12A5	Q9H2X9	1139 aa		13.79	□□□□□ -0.2
SRSF5-208	ENST00000554929	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.79	□□□□□ -0.2
SRSF5-208	ENST00000554929	PASK	Q96RG2	1323 aa		13.79	□□□□□ -0.2
SRSF5-208	ENST00000554929	EDC4	Q6P2E9	1401 aa	Known RBP	13.79	□□□□□ -0.2
SRSF5-208	ENST00000554929	DEFB115	Q30KQ5	88 aa		13.78	□□□□□ -0.2
SRSF5-208	ENST00000554929	COG3	Q96JB2	828 aa		13.78	□□□□□ -0.2
SRSF5-208	ENST00000554929	SLC24A1	O60721	1099 aa		13.77	□□□□□ -0.21
SRSF5-208	ENST00000554929	RPS6KA4	O75676	772 aa		13.77	□□□□□ -0.21
SRSF5-208	ENST00000554929	DDR1	Q08345	913 aa		13.77	□□□□□ -0.21
SRSF5-208	ENST00000554929	CCDC184	Q52MB2	194 aa		13.77	□□□□□ -0.21
SRSF5-208	ENST00000554929	SMG6	Q86US8	1419 aa	Known RBP	13.76	□□□□□ -0.21
SRSF5-208	ENST00000554929	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.76	□□□□□ -0.21
SRSF5-208	ENST00000554929	WDR33	Q9C0J8	1336 aa	Known RBP	13.76	□□□□□ -0.21
SRSF5-208	ENST00000554929	RRS1	Q15050	365 aa	Known RBP	13.76	□□□□□ -0.21
SRSF5-208	ENST00000554929	ERFE	Q4G0M1	354 aa		13.76	□□□□□ -0.21
SRSF5-208	ENST00000554929	BEGAIN	Q9BUH8	593 aa		13.76	□□□□□ -0.21
SRSF5-208	ENST00000554929	ATG3	Q9NT62	314 aa		13.76	□□□□□ -0.21
SRSF5-208	ENST00000554929	SRP68	Q9UHB9	627 aa	Known RBP	13.76	□□□□□ -0.21
SRSF5-208	ENST00000554929	NFKBIE	O00221	500 aa		13.75	□□□□□ -0.21
SRSF5-208	ENST00000554929	DDN	O94850	711 aa	Predicted RBP	13.75	□□□□□ -0.21
SRSF5-208	ENST00000554929	NKX1-1	Q15270	411 aa	Predicted RBP	13.75	□□□□□ -0.21
SRSF5-208	ENST00000554929	RC3H1	Q5TC82	1133 aa	Known RBP	13.75	□□□□□ -0.21
SRSF5-208	ENST00000554929	TERF2IP	Q9NYB0	399 aa		13.75	□□□□□ -0.21
SRSF5-208	ENST00000554929	LDHD	Q86WU2	507 aa		13.74	□□□□□ -0.21
SRSF5-208	ENST00000554929	TTLL6	Q8N841	843 aa		13.74	□□□□□ -0.21
SRSF5-208	ENST00000554929	MCOLN1	Q9GZU1	580 aa		13.74	□□□□□ -0.21
SRSF5-208	ENST00000554929	PDE4DIP	Q5VU43	2346 aa		13.73	□□□□□ -0.21
SRSF5-208	ENST00000554929	RASSF10	A6NK89	507 aa		13.73	□□□□□ -0.21
SRSF5-208	ENST00000554929	ITGBL1	O95965	494 aa	Predicted RBP	13.73	□□□□□ -0.21
SRSF5-208	ENST00000554929	CDCA8	Q53HL2	280 aa		13.73	□□□□□ -0.21
SRSF5-208	ENST00000554929	SLC4A9	Q96Q91	983 aa		13.73	□□□□□ -0.21
SRSF5-208	ENST00000554929	TSKS	Q9UJT2	592 aa		13.73	□□□□□ -0.21
SRSF5-208	ENST00000554929	ABT1	Q9ULW3	272 aa	Known RBP	13.73	□□□□□ -0.21
SRSF5-208	ENST00000554929		A0A1W2PP64	1363 aa		13.72	□□□□□ -0.21
SRSF5-208	ENST00000554929	CNTNAP4	Q9C0A0	1308 aa		13.72	□□□□□ -0.21
SRSF5-208	ENST00000554929	POLRMT	O00411	1230 aa	Known RBP	13.72	□□□□□ -0.21
SRSF5-208	ENST00000554929	ST18	O60284	1047 aa		13.72	□□□□□ -0.21
SRSF5-208	ENST00000554929	EAPP	Q56P03	285 aa	Predicted RBP	13.72	□□□□□ -0.21
SRSF5-208	ENST00000554929	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.72	□□□□□ -0.21
SRSF5-208	ENST00000554929	SPG7	Q9UQ90	795 aa		13.72	□□□□□ -0.21
SRSF5-208	ENST00000554929	BOLA1	Q9Y3E2	137 aa		13.72	□□□□□ -0.21
SRSF5-208	ENST00000554929	RTL1	A6NKG5	1358 aa		13.71	□□□□□ -0.21
SRSF5-208	ENST00000554929	INSR	P06213	1382 aa		13.71	□□□□□ -0.21
SRSF5-208	ENST00000554929	GRM1	Q13255	1194 aa		13.71	□□□□□ -0.21
SRSF5-208	ENST00000554929	HSP90AB2P	Q58FF8	381 aa		13.71	□□□□□ -0.21
SRSF5-208	ENST00000554929	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.71	□□□□□ -0.21
SRSF5-208	ENST00000554929	PNISR	Q8TF01	805 aa	Known RBP	13.71	□□□□□ -0.21
SRSF5-208	ENST00000554929	USP42	Q9H9J4	1324 aa	Known RBP	13.7	□□□□□ -0.22
SRSF5-208	ENST00000554929	IQCA1L	A6NCM1	817 aa		13.7	□□□□□ -0.22
SRSF5-208	ENST00000554929	ECM2	O94769	699 aa	Predicted RBP	13.7	□□□□□ -0.22
SRSF5-208	ENST00000554929	C3orf67	Q6ZVT6	689 aa		13.7	□□□□□ -0.22
SRSF5-208	ENST00000554929	MS4A4A	Q96JQ5	239 aa		13.7	□□□□□ -0.22
SRSF5-208	ENST00000554929	TESK2	Q96S53	571 aa		13.7	□□□□□ -0.22
SRSF5-208	ENST00000554929	KDR	P35968	1356 aa		13.7	□□□□□ -0.22
SRSF5-208	ENST00000554929	TM4SF1	P30408	202 aa		13.69	□□□□□ -0.22
SRSF5-208	ENST00000554929	PRPF38B	Q5VTL8	546 aa	Known RBP	13.69	□□□□□ -0.22
SRSF5-208	ENST00000554929	C2CD5	Q86YS7	1000 aa		13.69	□□□□□ -0.22
SRSF5-208	ENST00000554929	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.69	□□□□□ -0.22
SRSF5-208	ENST00000554929	MYH14	Q7Z406	1995 aa	Known RBP	13.69	□□□□□ -0.22
SRSF5-208	ENST00000554929	DICER1	Q9UPY3	1922 aa	Known RBP	13.68	□□□□□ -0.22
SRSF5-208	ENST00000554929	RGL2	O15211	777 aa		13.68	□□□□□ -0.22
SRSF5-208	ENST00000554929	DGKZ	Q13574	1117 aa		13.68	□□□□□ -0.22
SRSF5-208	ENST00000554929	TNRC18	O15417	2968 aa	Predicted RBP	13.68	□□□□□ -0.22
SRSF5-208	ENST00000554929	CASP8AP2	Q9UKL3	1982 aa		13.67	□□□□□ -0.22
SRSF5-208	ENST00000554929		H0YIN7	160 aa		13.67	□□□□□ -0.22
SRSF5-208	ENST00000554929	PER1	O15534	1290 aa	Predicted RBP	13.67	□□□□□ -0.22
SRSF5-208	ENST00000554929	C21orf2	O43822	256 aa		13.67	□□□□□ -0.22
SRSF5-208	ENST00000554929	IFNL2	Q8IZJ0	200 aa		13.67	□□□□□ -0.22
SRSF5-208	ENST00000554929	CAPNS2	Q96L46	248 aa		13.67	□□□□□ -0.22
SRSF5-208	ENST00000554929	GPR101	Q96P66	508 aa	Predicted RBP	13.67	□□□□□ -0.22
SRSF5-208	ENST00000554929	COL5A3	P25940	1745 aa	Predicted RBP	13.67	□□□□□ -0.22
SRSF5-208	ENST00000554929	CRKL	P46109	303 aa	Known RBP	13.66	□□□□□ -0.22
SRSF5-208	ENST00000554929	SOX10	P56693	466 aa		13.66	□□□□□ -0.22
SRSF5-208	ENST00000554929	MAP1S	Q66K74	1059 aa	Predicted RBP	13.66	□□□□□ -0.22
SRSF5-208	ENST00000554929	CNTROB	Q8N137	903 aa		13.66	□□□□□ -0.22
SRSF5-208	ENST00000554929	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
SRSF5-208	ENST00000554929	TSHZ2	Q9NRE2	1034 aa		13.66	□□□□□ -0.22
SRSF5-208	ENST00000554929	PPP4R2	Q9NY27	417 aa		13.66	□□□□□ -0.22
SRSF5-208	ENST00000554929	ZPR1	O75312	459 aa		13.65	□□□□□ -0.22
SRSF5-208	ENST00000554929	PHKG2	P15735	406 aa		13.65	□□□□□ -0.22
SRSF5-208	ENST00000554929	ECE1	P42892	770 aa		13.65	□□□□□ -0.22
SRSF5-208	ENST00000554929	USPL1	Q5W0Q7	1092 aa		13.65	□□□□□ -0.22
SRSF5-208	ENST00000554929	CYP4F22	Q6NT55	531 aa		13.65	□□□□□ -0.22
SRSF5-208	ENST00000554929	NUDC	Q9Y266	331 aa		13.65	□□□□□ -0.22
SRSF5-208	ENST00000554929	DLEC1	Q9Y238	1755 aa		13.64	□□□□□ -0.23
SRSF5-208	ENST00000554929	PTCD1	O75127	700 aa	Known RBP	13.64	□□□□□ -0.23
SRSF5-208	ENST00000554929	SCN4A	P35499	1836 aa		13.64	□□□□□ -0.23
SRSF5-208	ENST00000554929	AFDN	P55196	1824 aa	Known RBP	13.64	□□□□□ -0.23
SRSF5-208	ENST00000554929	SERPINB2	P05120	415 aa		13.63	□□□□□ -0.23
SRSF5-208	ENST00000554929	NFIX	Q14938	502 aa		13.63	□□□□□ -0.23
SRSF5-208	ENST00000554929	TAOK3	Q9H2K8	898 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms