RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ITGBL1O95965 494 aaPredicted RBP14.28□□□□□ -0.12
SRP54-205ENST00000554803 COL3A1P02461 1466 aaPredicted RBP14.28□□□□□ -0.12
SRP54-205ENST00000554803 USPL1Q5W0Q7 1092 aa14.28□□□□□ -0.12
SRP54-205ENST00000554803 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
SRP54-205ENST00000554803 EXOC6Q8TAG9 804 aa14.28□□□□□ -0.12
SRP54-205ENST00000554803 BACH2Q9BYV9 841 aa14.28□□□□□ -0.12
SRP54-205ENST00000554803 SCN11AQ9UI33 1791 aa14.28□□□□□ -0.12
SRP54-205ENST00000554803 CASP8AP2Q9UKL3 1982 aa14.28□□□□□ -0.12
SRP54-205ENST00000554803 SLX4Q8IY92 1834 aa14.27□□□□□ -0.12
SRP54-205ENST00000554803 LTBP3Q9NS15 1303 aa14.27□□□□□ -0.12
SRP54-205ENST00000554803 PTCD1O75127 700 aaKnown RBP14.27□□□□□ -0.13
SRP54-205ENST00000554803 HSP90AB1P08238 724 aaKnown RBP14.27□□□□□ -0.13
SRP54-205ENST00000554803 NFIXQ14938 502 aa14.27□□□□□ -0.13
SRP54-205ENST00000554803 C2CD5Q86YS7 1000 aa14.27□□□□□ -0.13
SRP54-205ENST00000554803 TRPM7Q96QT4 1865 aa14.27□□□□□ -0.13
SRP54-205ENST00000554803 CARMIL3Q8ND23 1372 aa14.26□□□□□ -0.13
SRP54-205ENST00000554803 ZNF521Q96K83 1311 aa14.26□□□□□ -0.13
SRP54-205ENST00000554803 IQCA1LA6NCM1 817 aa14.26□□□□□ -0.13
SRP54-205ENST00000554803 H0YIN7 160 aa14.26□□□□□ -0.13
SRP54-205ENST00000554803 PDE4AP27815 886 aa14.26□□□□□ -0.13
SRP54-205ENST00000554803 MTHFSP49914 203 aa14.26□□□□□ -0.13
SRP54-205ENST00000554803 DEFB115Q30KQ5 88 aa14.26□□□□□ -0.13
SRP54-205ENST00000554803 INTS5Q6P9B9 1019 aaKnown RBP14.26□□□□□ -0.13
SRP54-205ENST00000554803 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
SRP54-205ENST00000554803 WDR33Q9C0J8 1336 aaKnown RBP14.25□□□□□ -0.13
SRP54-205ENST00000554803 SERPINB2P05120 415 aa14.25□□□□□ -0.13
SRP54-205ENST00000554803 GOLGA2Q08379 1002 aa14.25□□□□□ -0.13
SRP54-205ENST00000554803 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
SRP54-205ENST00000554803 TAF1DQ9H5J8 278 aaPredicted RBP14.25□□□□□ -0.13
SRP54-205ENST00000554803 SOS1Q07889 1333 aaPredicted RBP14.24□□□□□ -0.13
SRP54-205ENST00000554803 CABP4P57796 275 aa14.24□□□□□ -0.13
SRP54-205ENST00000554803 C21orf2O43822 256 aa14.23□□□□□ -0.13
SRP54-205ENST00000554803 TAOK3Q9H2K8 898 aa14.23□□□□□ -0.13
SRP54-205ENST00000554803 NARFQ9UHQ1 456 aa14.23□□□□□ -0.13
SRP54-205ENST00000554803 LTBP1Q14766 1721 aa14.23□□□□□ -0.13
SRP54-205ENST00000554803 DEKP35659 375 aaKnown RBP14.22□□□□□ -0.13
SRP54-205ENST00000554803 BCL2L12Q9HB09 334 aa14.22□□□□□ -0.13
SRP54-205ENST00000554803 COL15A1P39059 1388 aa14.22□□□□□ -0.13
SRP54-205ENST00000554803 TRMT2AQ8IZ69 625 aaKnown RBP14.21□□□□□ -0.13
SRP54-205ENST00000554803 ZNF622Q969S3 477 aaKnown RBP eCLIP14.21□□□□□ -0.13
SRP54-205ENST00000554803 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.13
SRP54-205ENST00000554803 PDZRN3Q9UPQ7 1066 aa14.21□□□□□ -0.13
SRP54-205ENST00000554803 E9PSI1 815 aa14.2□□□□□ -0.14
SRP54-205ENST00000554803 PLEKHO1Q53GL0 409 aaPredicted RBP14.2□□□□□ -0.14
SRP54-205ENST00000554803 EAPPQ56P03 285 aaPredicted RBP14.2□□□□□ -0.14
SRP54-205ENST00000554803 DUSP27Q5VZP5 1158 aa14.2□□□□□ -0.14
SRP54-205ENST00000554803 ZNF530Q6P9A1 599 aaPredicted RBP14.2□□□□□ -0.14
SRP54-205ENST00000554803 NFATC2IPQ8NCF5 419 aa14.2□□□□□ -0.14
SRP54-205ENST00000554803 SCN7AQ01118 1682 aa14.2□□□□□ -0.14
SRP54-205ENST00000554803 EIF4A2Q14240 407 aaKnown RBP14.19□□□□□ -0.14
SRP54-205ENST00000554803 DNAJC10Q8IXB1 793 aa14.19□□□□□ -0.14
SRP54-205ENST00000554803 CFAP44Q96MT7 982 aa14.19□□□□□ -0.14
SRP54-205ENST00000554803 BEGAINQ9BUH8 593 aa14.19□□□□□ -0.14
SRP54-205ENST00000554803 ADAMTS8Q9UP79 889 aa14.19□□□□□ -0.14
SRP54-205ENST00000554803 PDE6BP35913 854 aa14.18□□□□□ -0.14
SRP54-205ENST00000554803 SLFN5Q08AF3 891 aa14.18□□□□□ -0.14
SRP54-205ENST00000554803 CFAP53Q96M91 514 aa14.18□□□□□ -0.14
SRP54-205ENST00000554803 MCOLN1Q9GZU1 580 aa14.18□□□□□ -0.14
SRP54-205ENST00000554803 HACL1Q9UJ83 578 aa14.18□□□□□ -0.14
SRP54-205ENST00000554803 ABT1Q9ULW3 272 aaKnown RBP14.18□□□□□ -0.14
SRP54-205ENST00000554803 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
SRP54-205ENST00000554803 CYP19A1P11511 503 aaPredicted RBP14.17□□□□□ -0.14
SRP54-205ENST00000554803 EPHX2P34913 555 aa14.17□□□□□ -0.14
SRP54-205ENST00000554803 AMOTQ4VCS5 1084 aa14.17□□□□□ -0.14
SRP54-205ENST00000554803 CNTROBQ8N137 903 aa14.17□□□□□ -0.14
SRP54-205ENST00000554803 CDCA7LQ96GN5 454 aa14.17□□□□□ -0.14
SRP54-205ENST00000554803 CRBNQ96SW2 442 aa14.17□□□□□ -0.14
SRP54-205ENST00000554803 BRIP1Q9BX63 1249 aa14.17□□□□□ -0.14
SRP54-205ENST00000554803 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
SRP54-205ENST00000554803 PDE3AQ14432 1141 aa14.16□□□□□ -0.14
SRP54-205ENST00000554803 SOGA3Q5TF21 947 aa14.16□□□□□ -0.14
SRP54-205ENST00000554803 MAP1SQ66K74 1059 aaPredicted RBP14.16□□□□□ -0.14
SRP54-205ENST00000554803 PNMA8AQ86V59 439 aaPredicted RBP14.16□□□□□ -0.14
SRP54-205ENST00000554803 CAPNS2Q96L46 248 aa14.16□□□□□ -0.14
SRP54-205ENST00000554803 ZBTB1Q9Y2K1 713 aa14.16□□□□□ -0.14
SRP54-205ENST00000554803 ECE1P42892 770 aa14.15□□□□□ -0.14
SRP54-205ENST00000554803 C1orf141Q5JVX7 400 aa14.15□□□□□ -0.14
SRP54-205ENST00000554803 DDX21Q9NR30 783 aaKnown RBP eCLIP14.15□□□□□ -0.14
SRP54-205ENST00000554803 ZNF541Q9H0D2 1346 aa14.15□□□□□ -0.15
SRP54-205ENST00000554803 DIAPH1O60610 1272 aaKnown RBP14.14□□□□□ -0.15
SRP54-205ENST00000554803 IL13P35225 146 aa14.14□□□□□ -0.15
SRP54-205ENST00000554803 PRR5LQ6MZQ0 368 aa14.14□□□□□ -0.15
SRP54-205ENST00000554803 BICDL1Q6ZP65 573 aa14.14□□□□□ -0.15
SRP54-205ENST00000554803 CNKSR1Q969H4 720 aa14.14□□□□□ -0.15
SRP54-205ENST00000554803 GPR101Q96P66 508 aaPredicted RBP14.14□□□□□ -0.15
SRP54-205ENST00000554803 MRC1P22897 1456 aa14.13□□□□□ -0.15
SRP54-205ENST00000554803 STYK1Q6J9G0 422 aa14.13□□□□□ -0.15
SRP54-205ENST00000554803 CYP4F22Q6NT55 531 aa14.13□□□□□ -0.15
SRP54-205ENST00000554803 PRPF40BQ6NWY9 871 aaKnown RBP14.13□□□□□ -0.15
SRP54-205ENST00000554803 TSKSQ9UJT2 592 aa14.13□□□□□ -0.15
SRP54-205ENST00000554803 MAPK8IP3Q9UPT6 1336 aa14.13□□□□□ -0.15
SRP54-205ENST00000554803 BCORQ6W2J9 1755 aa14.12□□□□□ -0.15
SRP54-205ENST00000554803 DLG5Q8TDM6 1919 aa14.12□□□□□ -0.15
SRP54-205ENST00000554803 MAP2K2P36507 400 aa14.12□□□□□ -0.15
SRP54-205ENST00000554803 PAXIP1Q6ZW49 1069 aaPredicted RBP14.12□□□□□ -0.15
SRP54-205ENST00000554803 U2SURPO15042 1029 aaKnown RBP14.11□□□□□ -0.15
SRP54-205ENST00000554803 CA12O43570 354 aa14.11□□□□□ -0.15
SRP54-205ENST00000554803 PRPF38BQ5VTL8 546 aaKnown RBP14.11□□□□□ -0.15
SRP54-205ENST00000554803 TBC1D9BQ66K14 1250 aa14.11□□□□□ -0.15
SRP54-205ENST00000554803 CCDC24Q8N4L8 307 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms