RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 RBM27Q9P2N5 1060 aaKnown RBP7.85□□□□□ -1.15
ATXN3-230ENST00000554673 SOS2Q07890 1332 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-230ENST00000554673 PKD1L3Q7Z443 1732 aa7.84□□□□□ -1.15
ATXN3-230ENST00000554673 TNFRSF10AO00220 468 aa7.84□□□□□ -1.15
ATXN3-230ENST00000554673 APAF1O14727 1248 aa7.84□□□□□ -1.15
ATXN3-230ENST00000554673 DGAT1O75907 488 aa7.84□□□□□ -1.15
ATXN3-230ENST00000554673 SPRYD7Q5W111 196 aa7.84□□□□□ -1.15
ATXN3-230ENST00000554673 PARP9Q8IXQ6 854 aa7.84□□□□□ -1.15
ATXN3-230ENST00000554673 RRP7AQ9Y3A4 280 aaKnown RBP7.84□□□□□ -1.15
ATXN3-230ENST00000554673 TNS3Q68CZ2 1445 aa7.84□□□□□ -1.15
ATXN3-230ENST00000554673 MSH6P52701 1360 aa7.84□□□□□ -1.16
ATXN3-230ENST00000554673 PHLPP1O60346 1717 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 TOGARAM1Q9Y4F4 1720 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 RNF123Q5XPI4 1314 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 PLCH1Q4KWH8 1693 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 ZNF697Q5TEC3 545 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 KRT28Q7Z3Y7 464 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 ZNF598Q86UK7 904 aaKnown RBP7.83□□□□□ -1.16
ATXN3-230ENST00000554673 NGDNQ8NEJ9 315 aaKnown RBP7.83□□□□□ -1.16
ATXN3-230ENST00000554673 CABLES1Q8TDN4 633 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 CCDC102AQ96A19 550 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 PRR14Q9BWN1 585 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 SALL2Q9Y467 1007 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-230ENST00000554673 SBNO1A3KN83 1393 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 KDRP35968 1356 aa7.83□□□□□ -1.16
ATXN3-230ENST00000554673 SPATA31A3Q5VYP0 1347 aa7.82□□□□□ -1.16
ATXN3-230ENST00000554673 MAP2K5Q13163 448 aa7.82□□□□□ -1.16
ATXN3-230ENST00000554673 CLUAP1Q96AJ1 413 aa7.82□□□□□ -1.16
ATXN3-230ENST00000554673 KDM3BQ7LBC6 1761 aa7.82□□□□□ -1.16
ATXN3-230ENST00000554673 ST8SIA5O15466 376 aa7.81□□□□□ -1.16
ATXN3-230ENST00000554673 S1PR4O95977 384 aa7.81□□□□□ -1.16
ATXN3-230ENST00000554673 HOXC9P31274 260 aa7.81□□□□□ -1.16
ATXN3-230ENST00000554673 DUSP27Q5VZP5 1158 aa7.81□□□□□ -1.16
ATXN3-230ENST00000554673 LIAT1Q6ZQX7 453 aa7.81□□□□□ -1.16
ATXN3-230ENST00000554673 ARHGEF25Q86VW2 580 aa7.81□□□□□ -1.16
ATXN3-230ENST00000554673 TTC13Q8NBP0 860 aa7.81□□□□□ -1.16
ATXN3-230ENST00000554673 TRAIPQ9BWF2 469 aa7.81□□□□□ -1.16
ATXN3-230ENST00000554673 SCN11AQ9UI33 1791 aa7.81□□□□□ -1.16
ATXN3-230ENST00000554673 IGSF1Q8N6C5 1336 aa7.8□□□□□ -1.16
ATXN3-230ENST00000554673 HMOX1P09601 288 aa7.8□□□□□ -1.16
ATXN3-230ENST00000554673 TCP11L2Q8N4U5 519 aa7.8□□□□□ -1.16
ATXN3-230ENST00000554673 COG3Q96JB2 828 aa7.8□□□□□ -1.16
ATXN3-230ENST00000554673 EYA1Q99502 592 aa7.8□□□□□ -1.16
ATXN3-230ENST00000554673 THUMPD2Q9BTF0 503 aaKnown RBP7.8□□□□□ -1.16
ATXN3-230ENST00000554673 NPDC1Q9NQX5 325 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-230ENST00000554673 SLAIN2Q9P270 581 aa7.8□□□□□ -1.16
ATXN3-230ENST00000554673 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.8□□□□□ -1.16
ATXN3-230ENST00000554673 MEGF6O75095 1541 aa7.79□□□□□ -1.16
ATXN3-230ENST00000554673 IRF6O14896 467 aa7.79□□□□□ -1.16
ATXN3-230ENST00000554673 PRR20EP86478 221 aa7.79□□□□□ -1.16
ATXN3-230ENST00000554673 PRR20CP86479 221 aa7.79□□□□□ -1.16
ATXN3-230ENST00000554673 PRR20DP86480 221 aa7.79□□□□□ -1.16
ATXN3-230ENST00000554673 PRR20BP86481 221 aa7.79□□□□□ -1.16
ATXN3-230ENST00000554673 PRR20AP86496 221 aa7.79□□□□□ -1.16
ATXN3-230ENST00000554673 ANKLE1Q8NAG6 615 aa7.79□□□□□ -1.16
ATXN3-230ENST00000554673 LRRC59Q96AG4 307 aaKnown RBP7.79□□□□□ -1.16
ATXN3-230ENST00000554673 FLT4P35916 1363 aa7.79□□□□□ -1.16
ATXN3-230ENST00000554673 C5P01031 1676 aa7.79□□□□□ -1.16
ATXN3-230ENST00000554673 ABCC6O95255 1503 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 PARP4Q9UKK3 1724 aaKnown RBP7.78□□□□□ -1.16
ATXN3-230ENST00000554673 DIAPH1O60610 1272 aaKnown RBP7.78□□□□□ -1.16
ATXN3-230ENST00000554673 GCP02774 474 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 PRKAR2BP31323 418 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 TMPOP42166 694 aaKnown RBP7.78□□□□□ -1.16
ATXN3-230ENST00000554673 SLFN5Q08AF3 891 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 MCM6Q14566 821 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 NBPF6Q5VWK0 638 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 WWC1Q8IX03 1113 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 USHBP1Q8N6Y0 703 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 ABTB2Q8N961 1025 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 NBPF4Q96M43 638 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 TNNQ9UQP3 1299 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 ARHGEF10O15013 1369 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 LRP6O75581 1613 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 CRB1P82279 1406 aa7.78□□□□□ -1.16
ATXN3-230ENST00000554673 RTL1A6NKG5 1358 aa7.77□□□□□ -1.17
ATXN3-230ENST00000554673 FAM83GA6ND36 823 aa7.77□□□□□ -1.17
ATXN3-230ENST00000554673 PPM1GO15355 546 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-230ENST00000554673 IRX6P78412 446 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-230ENST00000554673 RUNDC1Q96C34 613 aa7.77□□□□□ -1.17
ATXN3-230ENST00000554673 NUDCQ9Y266 331 aa7.77□□□□□ -1.17
ATXN3-230ENST00000554673 CPDO75976 1380 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 KIAA0232Q92628 1395 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 GDF9O60383 454 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 U2AF1L5P0DN76 240 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-230ENST00000554673 ATF3P18847 181 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 U2AF1Q01081 240 aaKnown RBP eCLIP7.76□□□□□ -1.17
ATXN3-230ENST00000554673 PSME1Q06323 249 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 FOXC1Q12948 553 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 DCTN1Q14203 1278 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 CHRNA2Q15822 529 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 KMT5BQ4FZB7 885 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 TREML4Q6UXN2 200 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 IP6K1Q92551 441 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 SUPT16HQ9Y5B9 1047 aaKnown RBP7.76□□□□□ -1.17
ATXN3-230ENST00000554673 PAPPAQ13219 1627 aa7.76□□□□□ -1.17
ATXN3-230ENST00000554673 COL14A1Q05707 1796 aaKnown RBP7.76□□□□□ -1.17
ATXN3-230ENST00000554673 ITGB4P16144 1822 aa7.75□□□□□ -1.17
ATXN3-230ENST00000554673 COL5A2P05997 1499 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-230ENST00000554673 KIF24Q5T7B8 1368 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms