RNA–Protein interactions for RNA: ENST00000554628.5

PTPN21-206, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 1,571 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-206ENST00000554628 TM4SF1P30408 202 aa23.38■■□□□ 1.33
PTPN21-206ENST00000554628 COPS6Q7L5N1 327 aa23.38■■□□□ 1.33
PTPN21-206ENST00000554628 CACNA1FO60840 1977 aa23.38■■□□□ 1.33
PTPN21-206ENST00000554628 TCERG1O14776 1098 aaKnown RBP23.37■■□□□ 1.33
PTPN21-206ENST00000554628 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
PTPN21-206ENST00000554628 NFIXQ14938 502 aa23.37■■□□□ 1.33
PTPN21-206ENST00000554628 KIF6Q6ZMV9 814 aa23.37■■□□□ 1.33
PTPN21-206ENST00000554628 XAGE3Q8WTP9 111 aa23.37■■□□□ 1.33
PTPN21-206ENST00000554628 HYPKQ9NX55 129 aa23.37■■□□□ 1.33
PTPN21-206ENST00000554628 MAP3K15Q6ZN16 1313 aa23.37■■□□□ 1.33
PTPN21-206ENST00000554628 HLFQ16534 295 aa23.36■■□□□ 1.33
PTPN21-206ENST00000554628 TBC1D9BQ66K14 1250 aa23.36■■□□□ 1.33
PTPN21-206ENST00000554628 ZBTB3Q9H5J0 574 aa23.36■■□□□ 1.33
PTPN21-206ENST00000554628 ZBED9Q6R2W3 1325 aa23.36■■□□□ 1.33
PTPN21-206ENST00000554628 AFDNP55196 1824 aaKnown RBP23.36■■□□□ 1.33
PTPN21-206ENST00000554628 DDR1Q08345 913 aa23.35■■□□□ 1.33
PTPN21-206ENST00000554628 CLEC4GQ6UXB4 293 aa23.35■■□□□ 1.33
PTPN21-206ENST00000554628 BICDL1Q6ZP65 573 aa23.35■■□□□ 1.33
PTPN21-206ENST00000554628 ERVV-1B6SEH8 477 aa23.35■■□□□ 1.33
PTPN21-206ENST00000554628 STK31Q9BXU1 1019 aa23.35■■□□□ 1.33
PTPN21-206ENST00000554628 PHAXQ9H814 394 aaKnown RBP23.35■■□□□ 1.33
PTPN21-206ENST00000554628 ZNF652Q9Y2D9 606 aa23.35■■□□□ 1.33
PTPN21-206ENST00000554628 PARP3Q9Y6F1 533 aa23.35■■□□□ 1.33
PTPN21-206ENST00000554628 POLRMTO00411 1230 aaKnown RBP23.34■■□□□ 1.33
PTPN21-206ENST00000554628 RGL2O15211 777 aa23.34■■□□□ 1.33
PTPN21-206ENST00000554628 FHDC1Q9C0D6 1143 aaPredicted RBP23.33■■□□□ 1.33
PTPN21-206ENST00000554628 NRXN2Q9P2S2 1712 aa23.32■■□□□ 1.32
PTPN21-206ENST00000554628 SLC4A2P04920 1241 aa23.31■■□□□ 1.32
PTPN21-206ENST00000554628 GIGYF2Q6Y7W6 1299 aaKnown RBP23.31■■□□□ 1.32
PTPN21-206ENST00000554628 KLHL34Q8N239 644 aa23.31■■□□□ 1.32
PTPN21-206ENST00000554628 SETDB2Q96T68 719 aa23.31■■□□□ 1.32
PTPN21-206ENST00000554628 ANKRD36CQ5JPF3 1778 aa23.3■■□□□ 1.32
PTPN21-206ENST00000554628 ARFGEF2Q9Y6D5 1785 aa23.3■■□□□ 1.32
PTPN21-206ENST00000554628 NIP7Q9Y221 180 aaKnown RBP eCLIP23.3■■□□□ 1.32
PTPN21-206ENST00000554628 KIF13BQ9NQT8 1826 aa23.3■■□□□ 1.32
PTPN21-206ENST00000554628 CARMIL3Q8ND23 1372 aa23.29■■□□□ 1.32
PTPN21-206ENST00000554628 SERPINB2P05120 415 aa23.29■■□□□ 1.32
PTPN21-206ENST00000554628 ANKRD13DQ6ZTN6 518 aa23.29■■□□□ 1.32
PTPN21-206ENST00000554628 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
PTPN21-206ENST00000554628 ATP10DQ9P241 1426 aa23.29■■□□□ 1.32
PTPN21-206ENST00000554628 G2E3Q7L622 706 aa23.28■■□□□ 1.32
PTPN21-206ENST00000554628 SYT17Q9BSW7 474 aa23.28■■□□□ 1.32
PTPN21-206ENST00000554628 GPTP24298 496 aa23.26■■□□□ 1.31
PTPN21-206ENST00000554628 C10orf71Q711Q0 1435 aa23.26■■□□□ 1.31
PTPN21-206ENST00000554628 CD2APQ9Y5K6 639 aa23.26■■□□□ 1.31
PTPN21-206ENST00000554628 RIC3Q7Z5B4 369 aa23.25■■□□□ 1.31
PTPN21-206ENST00000554628 ZNF34Q8IZ26 560 aa23.25■■□□□ 1.31
PTPN21-206ENST00000554628 UBN2Q6ZU65 1347 aa23.24■■□□□ 1.31
PTPN21-206ENST00000554628 DDX58O95786 925 aaKnown RBP23.24■■□□□ 1.31
PTPN21-206ENST00000554628 FLIIQ13045 1269 aa23.24■■□□□ 1.31
PTPN21-206ENST00000554628 CT47B1P0C2W7 299 aaPredicted RBP23.23■■□□□ 1.31
PTPN21-206ENST00000554628 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
PTPN21-206ENST00000554628 HSP90AB3PQ58FF7 597 aa23.23■■□□□ 1.31
PTPN21-206ENST00000554628 NLGN2Q8NFZ4 835 aa23.23■■□□□ 1.31
PTPN21-206ENST00000554628 ZNF428Q96B54 188 aa23.23■■□□□ 1.31
PTPN21-206ENST00000554628 FAM177BA6PVY3 158 aa23.23■■□□□ 1.31
PTPN21-206ENST00000554628 NBPF5PQ86XG9 351 aaPredicted RBP23.23■■□□□ 1.31
PTPN21-206ENST00000554628 KIAA1551Q9HCM1 1747 aa23.22■■□□□ 1.31
PTPN21-206ENST00000554628 ANKRD31Q8N7Z5 1873 aa23.22■■□□□ 1.31
PTPN21-206ENST00000554628 N4BP2Q86UW6 1770 aaPredicted RBP23.22■■□□□ 1.31
PTPN21-206ENST00000554628 PRR5LQ6MZQ0 368 aa23.22■■□□□ 1.31
PTPN21-206ENST00000554628 ADCY9O60503 1353 aa23.21■■□□□ 1.31
PTPN21-206ENST00000554628 PI4KAP2A4QPH2 592 aa23.21■■□□□ 1.31
PTPN21-206ENST00000554628 FKBP5Q13451 457 aaPredicted RBP23.21■■□□□ 1.31
PTPN21-206ENST00000554628 KSR2Q6VAB6 950 aa23.21■■□□□ 1.31
PTPN21-206ENST00000554628 CCDC24Q8N4L8 307 aa23.21■■□□□ 1.31
PTPN21-206ENST00000554628 PI4KAP1Q8N8J0 262 aa23.21■■□□□ 1.31
PTPN21-206ENST00000554628 CNBD1Q8NA66 436 aa23.21■■□□□ 1.31
PTPN21-206ENST00000554628 SSH1Q8WYL5 1049 aa23.21■■□□□ 1.31
PTPN21-206ENST00000554628 NPHP1O15259 732 aa23.2■■□□□ 1.3
PTPN21-206ENST00000554628 SUSD4Q5VX71 490 aa23.2■■□□□ 1.3
PTPN21-206ENST00000554628 TPTE2Q6XPS3 522 aa23.2■■□□□ 1.3
PTPN21-206ENST00000554628 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
PTPN21-206ENST00000554628 MAP3K2Q9Y2U5 619 aa23.2■■□□□ 1.3
PTPN21-206ENST00000554628 ALDH1L2Q3SY69 923 aa23.19■■□□□ 1.3
PTPN21-206ENST00000554628 PARP10Q53GL7 1025 aa23.19■■□□□ 1.3
PTPN21-206ENST00000554628 MRPL50Q8N5N7 158 aaKnown RBP23.19■■□□□ 1.3
PTPN21-206ENST00000554628 ATP5J2-PTCD1G3V325 749 aa23.18■■□□□ 1.3
PTPN21-206ENST00000554628 NLRP10Q86W26 655 aa23.18■■□□□ 1.3
PTPN21-206ENST00000554628 ISCA1Q9BUE6 129 aa23.18■■□□□ 1.3
PTPN21-206ENST00000554628 YTHDC1Q96MU7 727 aaKnown RBP23.18■■□□□ 1.3
PTPN21-206ENST00000554628 MYD88Q99836 296 aa23.18■■□□□ 1.3
PTPN21-206ENST00000554628 METTL22Q9BUU2 404 aaPredicted RBP23.18■■□□□ 1.3
PTPN21-206ENST00000554628 NYXQ9GZU5 481 aa23.18■■□□□ 1.3
PTPN21-206ENST00000554628 PXDNLA1KZ92 1463 aa23.18■■□□□ 1.3
PTPN21-206ENST00000554628 NTSR2O95665 410 aa23.17■■□□□ 1.3
PTPN21-206ENST00000554628 TGFB2P61812 414 aa23.17■■□□□ 1.3
PTPN21-206ENST00000554628 ST5P78524 1137 aa23.17■■□□□ 1.3
PTPN21-206ENST00000554628 PPP1R42Q7Z4L9 355 aa23.17■■□□□ 1.3
PTPN21-206ENST00000554628 SMC4Q9NTJ3 1288 aa23.17■■□□□ 1.3
PTPN21-206ENST00000554628 IBTKQ9P2D0 1353 aaPredicted RBP23.17■■□□□ 1.3
PTPN21-206ENST00000554628 GTF2E1P29083 439 aaPredicted RBP23.16■■□□□ 1.3
PTPN21-206ENST00000554628 NUTM1Q86Y26 1132 aa23.16■■□□□ 1.3
PTPN21-206ENST00000554628 GOLGB1Q14789 3259 aaKnown RBP23.15■■□□□ 1.3
PTPN21-206ENST00000554628 RARSP54136 660 aaKnown RBP23.15■■□□□ 1.3
PTPN21-206ENST00000554628 BRIP1Q9BX63 1249 aa23.15■■□□□ 1.3
PTPN21-206ENST00000554628 BRCA1P38398 1863 aaKnown RBP23.15■■□□□ 1.3
PTPN21-206ENST00000554628 A0A0G2JLW4 131 aa23.14■■□□□ 1.3
PTPN21-206ENST00000554628 TRIM28Q13263 835 aaKnown RBP23.14■■□□□ 1.3
PTPN21-206ENST00000554628 DNAAF4Q8WXU2 420 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms