RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 POM121CA8CG34 1229 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 WIPF1O43516 503 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 PPFIA3O75145 1194 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 TSPY4P0CV99 314 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 TSPY10P0CW01 314 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 PTSQ03393 145 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 SEMA3FQ13275 785 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 SLFNL1Q499Z3 407 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 RNF135Q8IUD6 432 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 VWDEQ8N2E2 1590 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 MBD5Q9P267 1494 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
ATXN3-228ENST00000554592 MTUS2Q5JR59 1369 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 SENP3-EIF4A1A0A087X0R7 540 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 SLC35F4A4IF30 521 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 PIK3CDO00329 1044 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 VSIG8P0DPA2 414 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 INSM1Q01101 510 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-228ENST00000554592 CYP2U1Q7Z449 544 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 ARID3AQ99856 593 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 STK17AQ9UEE5 414 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 DOLKQ9UPQ8 538 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 HRH3Q9Y5N1 445 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 NEURL4Q96JN8 1562 aa7.75□□□□□ -1.17
ATXN3-228ENST00000554592 CLN3Q13286 438 aa7.74□□□□□ -1.17
ATXN3-228ENST00000554592 PLPP7Q8NBV4 271 aa7.74□□□□□ -1.17
ATXN3-228ENST00000554592 SLC16A10Q8TF71 515 aa7.74□□□□□ -1.17
ATXN3-228ENST00000554592 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
ATXN3-228ENST00000554592 UGGT1Q9NYU2 1555 aa7.73□□□□□ -1.17
ATXN3-228ENST00000554592 GNRH1P01148 92 aa7.73□□□□□ -1.17
ATXN3-228ENST00000554592 LTKP29376 864 aa7.73□□□□□ -1.17
ATXN3-228ENST00000554592 GPC1P35052 558 aa7.73□□□□□ -1.17
ATXN3-228ENST00000554592 MAP7D1Q3KQU3 841 aa7.73□□□□□ -1.17
ATXN3-228ENST00000554592 GRIP2Q9C0E4 1043 aa7.73□□□□□ -1.17
ATXN3-228ENST00000554592 ARHGEF10LQ9HCE6 1279 aa7.73□□□□□ -1.17
ATXN3-228ENST00000554592 EID1Q9Y6B2 187 aa7.73□□□□□ -1.17
ATXN3-228ENST00000554592 FYCO1Q9BQS8 1478 aa7.73□□□□□ -1.17
ATXN3-228ENST00000554592 INO80Q9ULG1 1556 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-228ENST00000554592 IL2RAP01589 272 aa7.72□□□□□ -1.17
ATXN3-228ENST00000554592 GMPRP36959 345 aa7.72□□□□□ -1.17
ATXN3-228ENST00000554592 USP4Q13107 963 aa7.72□□□□□ -1.17
ATXN3-228ENST00000554592 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
ATXN3-228ENST00000554592 CCDC82Q8N4S0 544 aa7.72□□□□□ -1.17
ATXN3-228ENST00000554592 CCDC155Q8N6L0 562 aa7.72□□□□□ -1.17
ATXN3-228ENST00000554592 IRF7Q92985 503 aa7.72□□□□□ -1.17
ATXN3-228ENST00000554592 CDC42BPAQ5VT25 1732 aa7.72□□□□□ -1.17
ATXN3-228ENST00000554592 MEN1O00255 615 aa7.71□□□□□ -1.18
ATXN3-228ENST00000554592 STAU1O95793 577 aaKnown RBP7.71□□□□□ -1.18
ATXN3-228ENST00000554592 MYCP01106 439 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-228ENST00000554592 KCNA6P17658 529 aa7.71□□□□□ -1.18
ATXN3-228ENST00000554592 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
ATXN3-228ENST00000554592 XAGE2Q96GT9 111 aa7.71□□□□□ -1.18
ATXN3-228ENST00000554592 RAB6BQ9NRW1 208 aa7.71□□□□□ -1.18
ATXN3-228ENST00000554592 KDM5DQ9BY66 1539 aa7.71□□□□□ -1.18
ATXN3-228ENST00000554592 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-228ENST00000554592 OXLD1Q5BKU9 147 aa7.7□□□□□ -1.18
ATXN3-228ENST00000554592 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
ATXN3-228ENST00000554592 WWC1Q8IX03 1113 aa7.7□□□□□ -1.18
ATXN3-228ENST00000554592 NFATC2IPQ8NCF5 419 aa7.7□□□□□ -1.18
ATXN3-228ENST00000554592 NANOS1Q8WY41 292 aaKnown RBP7.7□□□□□ -1.18
ATXN3-228ENST00000554592 UCN2Q96RP3 112 aa7.7□□□□□ -1.18
ATXN3-228ENST00000554592 ESYT1Q9BSJ8 1104 aa7.7□□□□□ -1.18
ATXN3-228ENST00000554592 ETNK1Q9HBU6 452 aa7.7□□□□□ -1.18
ATXN3-228ENST00000554592 DEPDC5O75140 1603 aa7.7□□□□□ -1.18
ATXN3-228ENST00000554592 SCNN1DP51172 638 aa7.69□□□□□ -1.18
ATXN3-228ENST00000554592 CENPCQ03188 943 aa7.69□□□□□ -1.18
ATXN3-228ENST00000554592 HDGFL1Q5TGJ6 251 aa7.69□□□□□ -1.18
ATXN3-228ENST00000554592 GPR161Q8N6U8 529 aaKnown RBP7.69□□□□□ -1.18
ATXN3-228ENST00000554592 CNKSR1Q969H4 720 aa7.69□□□□□ -1.18
ATXN3-228ENST00000554592 FHDC1Q9C0D6 1143 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-228ENST00000554592 TMEM94Q12767 1356 aa7.69□□□□□ -1.18
ATXN3-228ENST00000554592 LRRIQ1Q96JM4 1722 aa7.69□□□□□ -1.18
ATXN3-228ENST00000554592 CCDC141Q6ZP82 1450 aa7.68□□□□□ -1.18
ATXN3-228ENST00000554592 ADGBQ8N7X0 1667 aa7.68□□□□□ -1.18
ATXN3-228ENST00000554592 SPATA31C2B4DYI2 1134 aa7.68□□□□□ -1.18
ATXN3-228ENST00000554592 ITGA6P23229 1130 aa7.68□□□□□ -1.18
ATXN3-228ENST00000554592 ZNF772Q68DY9 489 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-228ENST00000554592 NLRP3Q96P20 1036 aa7.68□□□□□ -1.18
ATXN3-228ENST00000554592 SLAIN2Q9P270 581 aa7.68□□□□□ -1.18
ATXN3-228ENST00000554592 PCDHGA11Q9Y5H2 935 aa7.68□□□□□ -1.18
ATXN3-228ENST00000554592 CEP162Q5TB80 1403 aa7.68□□□□□ -1.18
ATXN3-228ENST00000554592 SCAF11Q99590 1463 aaKnown RBP7.68□□□□□ -1.18
ATXN3-228ENST00000554592 SKIP12755 728 aa7.67□□□□□ -1.18
ATXN3-228ENST00000554592 RHOQP17081 205 aa7.67□□□□□ -1.18
ATXN3-228ENST00000554592 POU4F2Q12837 409 aa7.67□□□□□ -1.18
ATXN3-228ENST00000554592 SIRT1Q96EB6 747 aa7.67□□□□□ -1.18
ATXN3-228ENST00000554592 JCADQ9P266 1359 aa7.67□□□□□ -1.18
ATXN3-228ENST00000554592 TBC1D9Q6ZT07 1266 aa7.66□□□□□ -1.18
ATXN3-228ENST00000554592 SLC26A8Q96RN1 970 aa7.66□□□□□ -1.18
ATXN3-228ENST00000554592 CUEDC1Q9NWM3 386 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-228ENST00000554592 TMEM2Q9UHN6 1383 aa7.66□□□□□ -1.18
ATXN3-228ENST00000554592 ERVK-7P63135 1459 aa7.66□□□□□ -1.18
ATXN3-228ENST00000554592 RNF17Q9BXT8 1623 aaKnown RBP7.66□□□□□ -1.18
ATXN3-228ENST00000554592 POLR1AO95602 1720 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-228ENST00000554592 TMEM229AB2RXF0 380 aa7.65□□□□□ -1.18
ATXN3-228ENST00000554592 WASLO00401 505 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-228ENST00000554592 LZTS3O60299 673 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms