RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 FURINP09958 794 aa7.42□□□□□ -1.22
ATXN3-227ENST00000554491 SAMD5Q5TGI4 173 aa7.42□□□□□ -1.22
ATXN3-227ENST00000554491 ZNF468Q5VIY5 522 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-227ENST00000554491 ADAMTS19Q8TE59 1207 aa7.42□□□□□ -1.22
ATXN3-227ENST00000554491 PRR12Q9ULL5 1215 aa7.42□□□□□ -1.22
ATXN3-227ENST00000554491 ATAD2BQ9ULI0 1458 aa7.42□□□□□ -1.22
ATXN3-227ENST00000554491 POM121CA8CG34 1229 aa7.41□□□□□ -1.22
ATXN3-227ENST00000554491 C1QTNF9BB2RNN3 333 aa7.41□□□□□ -1.22
ATXN3-227ENST00000554491 K7ELQ4 463 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-227ENST00000554491 SH3PXD2AQ5TCZ1 1133 aa7.41□□□□□ -1.22
ATXN3-227ENST00000554491 LRRC69Q6ZNQ3 347 aa7.41□□□□□ -1.22
ATXN3-227ENST00000554491 CD163Q86VB7 1156 aa7.41□□□□□ -1.22
ATXN3-227ENST00000554491 SLC9A9Q8IVB4 645 aa7.41□□□□□ -1.22
ATXN3-227ENST00000554491 C7orf43Q8WVR3 580 aa7.41□□□□□ -1.22
ATXN3-227ENST00000554491 AVENQ9NQS1 362 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-227ENST00000554491 MARK1Q9P0L2 795 aa7.41□□□□□ -1.22
ATXN3-227ENST00000554491 WDR62O43379 1518 aa7.41□□□□□ -1.22
ATXN3-227ENST00000554491 LZTS3O60299 673 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-227ENST00000554491 NOS2P35228 1153 aa7.4□□□□□ -1.22
ATXN3-227ENST00000554491 CHRNA4P43681 627 aa7.4□□□□□ -1.22
ATXN3-227ENST00000554491 TEAD4Q15561 434 aa7.4□□□□□ -1.22
ATXN3-227ENST00000554491 ZNF232Q9UNY5 417 aa7.4□□□□□ -1.22
ATXN3-227ENST00000554491 KIAA1024Q9UPX6 916 aa7.4□□□□□ -1.22
ATXN3-227ENST00000554491 EML1O00423 815 aa7.39□□□□□ -1.23
ATXN3-227ENST00000554491 PIK3R2O00459 728 aa7.39□□□□□ -1.23
ATXN3-227ENST00000554491 XP32Q5T750 250 aa7.39□□□□□ -1.23
ATXN3-227ENST00000554491 TRIM11Q96F44 468 aa7.39□□□□□ -1.23
ATXN3-227ENST00000554491 ZBTB7BO15156 539 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-227ENST00000554491 CLDN10P78369 228 aa7.38□□□□□ -1.23
ATXN3-227ENST00000554491 SYT9Q86SS6 491 aa7.38□□□□□ -1.23
ATXN3-227ENST00000554491 TPCN2Q8NHX9 752 aa7.38□□□□□ -1.23
ATXN3-227ENST00000554491 NOP53Q9NZM5 478 aaKnown RBP7.38□□□□□ -1.23
ATXN3-227ENST00000554491 MRC2Q9UBG0 1479 aa7.37□□□□□ -1.23
ATXN3-227ENST00000554491 SFSWAPQ12872 951 aaKnown RBP7.37□□□□□ -1.23
ATXN3-227ENST00000554491 LAMC2Q13753 1193 aa7.37□□□□□ -1.23
ATXN3-227ENST00000554491 UCN2Q96RP3 112 aa7.37□□□□□ -1.23
ATXN3-227ENST00000554491 MDFIQ99750 246 aa7.37□□□□□ -1.23
ATXN3-227ENST00000554491 PLVAPQ9BX97 442 aa7.37□□□□□ -1.23
ATXN3-227ENST00000554491 SMARCA4P51532 1647 aa7.37□□□□□ -1.23
ATXN3-227ENST00000554491 SERTM1A2A2V5 107 aa7.36□□□□□ -1.23
ATXN3-227ENST00000554491 USP17L3A6NCW0 530 aa7.36□□□□□ -1.23
ATXN3-227ENST00000554491 USP17L4A6NCW7 530 aa7.36□□□□□ -1.23
ATXN3-227ENST00000554491 CCDC102BQ68D86 513 aa7.36□□□□□ -1.23
ATXN3-227ENST00000554491 USP17L2Q6R6M4 530 aa7.36□□□□□ -1.23
ATXN3-227ENST00000554491 USP17L1Q7RTZ2 530 aa7.36□□□□□ -1.23
ATXN3-227ENST00000554491 WWC1Q8IX03 1113 aa7.36□□□□□ -1.23
ATXN3-227ENST00000554491 SLC30A3Q99726 388 aa7.36□□□□□ -1.23
ATXN3-227ENST00000554491 TSPAN10Q9H1Z9 355 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-227ENST00000554491 ELOA3CA0A087WX78 387 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-227ENST00000554491 ELOA3DA6NLF2 546 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-227ENST00000554491 RAD21O60216 631 aa7.35□□□□□ -1.23
ATXN3-227ENST00000554491 ELOA3BQ3SY89 546 aa7.35□□□□□ -1.23
ATXN3-227ENST00000554491 HDGFL1Q5TGJ6 251 aa7.35□□□□□ -1.23
ATXN3-227ENST00000554491 TRIM50Q86XT4 487 aa7.35□□□□□ -1.23
ATXN3-227ENST00000554491 PLEKHM2Q8IWE5 1019 aa7.35□□□□□ -1.23
ATXN3-227ENST00000554491 ELOA3Q8NG57 546 aa7.35□□□□□ -1.23
ATXN3-227ENST00000554491 ARHGEF11O15085 1522 aa7.35□□□□□ -1.23
ATXN3-227ENST00000554491 PDS5BQ9NTI5 1447 aa7.35□□□□□ -1.23
ATXN3-227ENST00000554491 UBTFP17480 764 aaKnown RBP7.34□□□□□ -1.23
ATXN3-227ENST00000554491 RHPN1Q8TCX5 695 aa7.34□□□□□ -1.23
ATXN3-227ENST00000554491 HSH2DQ96JZ2 352 aa7.34□□□□□ -1.23
ATXN3-227ENST00000554491 NEUROD4Q9HD90 331 aa7.34□□□□□ -1.23
ATXN3-227ENST00000554491 HCN4Q9Y3Q4 1203 aa7.34□□□□□ -1.23
ATXN3-227ENST00000554491 BAZ1BQ9UIG0 1483 aaKnown RBP7.34□□□□□ -1.23
ATXN3-227ENST00000554491 RAB44Q7Z6P3 723 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-227ENST00000554491 OGFOD1Q8N543 542 aa7.33□□□□□ -1.24
ATXN3-227ENST00000554491 STARD13Q9Y3M8 1113 aa7.33□□□□□ -1.24
ATXN3-227ENST00000554491 ATP9BO43861 1147 aa7.32□□□□□ -1.24
ATXN3-227ENST00000554491 SIN3BO75182 1162 aa7.32□□□□□ -1.24
ATXN3-227ENST00000554491 ALAS2P22557 587 aa7.32□□□□□ -1.24
ATXN3-227ENST00000554491 ITGB7P26010 798 aa7.32□□□□□ -1.24
ATXN3-227ENST00000554491 SPEM2Q0P670 501 aa7.32□□□□□ -1.24
ATXN3-227ENST00000554491 DOC2BQ14184 412 aa7.32□□□□□ -1.24
ATXN3-227ENST00000554491 TSEN2Q8NCE0 465 aaKnown RBP7.32□□□□□ -1.24
ATXN3-227ENST00000554491 ZNF280CQ8ND82 737 aa7.32□□□□□ -1.24
ATXN3-227ENST00000554491 ZNF594Q96JF6 807 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-227ENST00000554491 PHACTR1Q9C0D0 580 aa7.32□□□□□ -1.24
ATXN3-227ENST00000554491 MKRN1Q9UHC7 482 aaKnown RBP7.32□□□□□ -1.24
ATXN3-227ENST00000554491 GPC6Q9Y625 555 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-227ENST00000554491 SFI1A8K8P3 1242 aa7.31□□□□□ -1.24
ATXN3-227ENST00000554491 ADARB2-AS1A8MUL3 147 aa7.31□□□□□ -1.24
ATXN3-227ENST00000554491 ATP1A2P50993 1020 aa7.31□□□□□ -1.24
ATXN3-227ENST00000554491 PSMA6P60900 246 aaKnown RBP7.31□□□□□ -1.24
ATXN3-227ENST00000554491 COL9A3Q14050 684 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-227ENST00000554491 POTEAQ6S8J7 498 aa7.31□□□□□ -1.24
ATXN3-227ENST00000554491 C8orf86Q6ZUL3 223 aa7.31□□□□□ -1.24
ATXN3-227ENST00000554491 PEG3Q9GZU2 1588 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 FAM229AH3BQW9 127 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 M0R082 166 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 C21orf2O43822 256 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 DKK1O94907 266 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 SPATA31C1P0DKV0 1188 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 HIRAP54198 1017 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-227ENST00000554491 C1orf53Q5VUE5 145 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 LARGE2Q8N3Y3 721 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 ZNF417Q8TAU3 575 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 CEP63Q96MT8 703 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 ZNF587Q96SQ5 575 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-227ENST00000554491 BRD7Q9NPI1 651 aa7.3□□□□□ -1.24
ATXN3-227ENST00000554491 PALM3A6NDB9 673 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms