RNA–Protein interactions for RNA: ENST00000554299.1

AL355102.3-201, humanhuman

BASIC

Gene AL355102.3, Length 1,678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355102.3-201ENST00000554299 KLHL40Q2TBA0 621 aa16.86■□□□□ 0.29
AL355102.3-201ENST00000554299 TMX3Q96JJ7 454 aa16.86■□□□□ 0.29
AL355102.3-201ENST00000554299 ECHDC1Q9NTX5 307 aa16.86■□□□□ 0.29
AL355102.3-201ENST00000554299 SNRPA1P09661 255 aaKnown RBP16.85■□□□□ 0.29
AL355102.3-201ENST00000554299 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
AL355102.3-201ENST00000554299 CWF19L2Q2TBE0 894 aaKnown RBP16.85■□□□□ 0.29
AL355102.3-201ENST00000554299 PARP4Q9UKK3 1724 aaKnown RBP16.85■□□□□ 0.29
AL355102.3-201ENST00000554299 NEXNQ0ZGT2 675 aa16.85■□□□□ 0.29
AL355102.3-201ENST00000554299 NFATC2IPQ8NCF5 419 aa16.85■□□□□ 0.29
AL355102.3-201ENST00000554299 KAZALD1Q96I82 304 aa16.85■□□□□ 0.29
AL355102.3-201ENST00000554299 SUCLG2Q96I99 432 aa16.85■□□□□ 0.29
AL355102.3-201ENST00000554299 METTL22Q9BUU2 404 aaPredicted RBP16.85■□□□□ 0.29
AL355102.3-201ENST00000554299 C5P01031 1676 aa16.84■□□□□ 0.29
AL355102.3-201ENST00000554299 IGKV5-2P06315 115 aa16.84■□□□□ 0.29
AL355102.3-201ENST00000554299 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
AL355102.3-201ENST00000554299 RIC3Q7Z5B4 369 aa16.84■□□□□ 0.29
AL355102.3-201ENST00000554299 ZGPATQ8N5A5 531 aaKnown RBP16.84■□□□□ 0.29
AL355102.3-201ENST00000554299 RUFY2Q8WXA3 655 aa16.84■□□□□ 0.29
AL355102.3-201ENST00000554299 FMNL2Q96PY5 1086 aa16.84■□□□□ 0.29
AL355102.3-201ENST00000554299 LSG1Q9H089 658 aaKnown RBP16.84■□□□□ 0.29
AL355102.3-201ENST00000554299 NEURL1BA8MQ27 555 aa16.83■□□□□ 0.28
AL355102.3-201ENST00000554299 CYP27B1O15528 508 aa16.83■□□□□ 0.28
AL355102.3-201ENST00000554299 IFIT2P09913 472 aaKnown RBP16.83■□□□□ 0.28
AL355102.3-201ENST00000554299 SLC39A6Q13433 755 aa16.83■□□□□ 0.28
AL355102.3-201ENST00000554299 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.28
AL355102.3-201ENST00000554299 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
AL355102.3-201ENST00000554299 ERBB4Q15303 1308 aa16.82■□□□□ 0.28
AL355102.3-201ENST00000554299 GCKRQ14397 625 aa16.82■□□□□ 0.28
AL355102.3-201ENST00000554299 KIAA1211Q6ZU35 1233 aa16.82■□□□□ 0.28
AL355102.3-201ENST00000554299 FAM43AQ8N2R8 423 aa16.82■□□□□ 0.28
AL355102.3-201ENST00000554299 XAGE3Q8WTP9 111 aa16.82■□□□□ 0.28
AL355102.3-201ENST00000554299 DDX17Q92841 729 aaKnown RBP16.82■□□□□ 0.28
AL355102.3-201ENST00000554299 BICC1Q9H694 974 aaKnown RBP16.82■□□□□ 0.28
AL355102.3-201ENST00000554299 G3BP1Q13283 466 aaKnown RBP eCLIP16.81■□□□□ 0.28
AL355102.3-201ENST00000554299 EVI5LQ96CN4 794 aa16.81■□□□□ 0.28
AL355102.3-201ENST00000554299 IL25Q9H293 177 aa16.81■□□□□ 0.28
AL355102.3-201ENST00000554299 GRPEL1Q9HAV7 217 aa16.81■□□□□ 0.28
AL355102.3-201ENST00000554299 ZDHHC9Q9Y397 364 aa16.81■□□□□ 0.28
AL355102.3-201ENST00000554299 HIP1O00291 1037 aa16.81■□□□□ 0.28
AL355102.3-201ENST00000554299 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
AL355102.3-201ENST00000554299 ANKRD13DQ6ZTN6 518 aa16.8■□□□□ 0.28
AL355102.3-201ENST00000554299 COPS6Q7L5N1 327 aa16.8■□□□□ 0.28
AL355102.3-201ENST00000554299 CABLES1Q8TDN4 633 aa16.8■□□□□ 0.28
AL355102.3-201ENST00000554299 KCNB2Q92953 911 aa16.8■□□□□ 0.28
AL355102.3-201ENST00000554299 SNRKQ9NRH2 765 aa16.8■□□□□ 0.28
AL355102.3-201ENST00000554299 DIAPH3Q9NSV4 1193 aa16.8■□□□□ 0.28
AL355102.3-201ENST00000554299 LMBRD1Q9NUN5 540 aa16.8■□□□□ 0.28
AL355102.3-201ENST00000554299 SASH1O94885 1247 aa16.79■□□□□ 0.28
AL355102.3-201ENST00000554299 BRD1O95696 1058 aa16.79■□□□□ 0.28
AL355102.3-201ENST00000554299 MAP4K4O95819 1239 aaPredicted RBP16.79■□□□□ 0.28
AL355102.3-201ENST00000554299 PKP1Q13835 747 aa16.79■□□□□ 0.28
AL355102.3-201ENST00000554299 AACSQ86V21 672 aa16.79■□□□□ 0.28
AL355102.3-201ENST00000554299 PA2G4Q9UQ80 394 aaKnown RBP16.79■□□□□ 0.28
AL355102.3-201ENST00000554299 SNX14Q9Y5W7 946 aa16.79■□□□□ 0.28
AL355102.3-201ENST00000554299 GLI3P10071 1580 aa16.79■□□□□ 0.28
AL355102.3-201ENST00000554299 CABP4P57796 275 aa16.78■□□□□ 0.28
AL355102.3-201ENST00000554299 CHRNA2Q15822 529 aa16.78■□□□□ 0.28
AL355102.3-201ENST00000554299 MCTP1Q6DN14 999 aa16.78■□□□□ 0.28
AL355102.3-201ENST00000554299 BRINP3Q76B58 766 aa16.78■□□□□ 0.28
AL355102.3-201ENST00000554299 COPRSQ9NQ92 184 aa16.78■□□□□ 0.28
AL355102.3-201ENST00000554299 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
AL355102.3-201ENST00000554299 AK9Q5TCS8 1911 aa16.78■□□□□ 0.28
AL355102.3-201ENST00000554299 WDR17Q8IZU2 1322 aa16.78■□□□□ 0.28
AL355102.3-201ENST00000554299 TTC14Q96N46 770 aa16.78■□□□□ 0.28
AL355102.3-201ENST00000554299 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.28
AL355102.3-201ENST00000554299 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.28
AL355102.3-201ENST00000554299 LAMB4A4D0S4 1761 aa16.77■□□□□ 0.28
AL355102.3-201ENST00000554299 MYL6BP14649 208 aa16.77■□□□□ 0.28
AL355102.3-201ENST00000554299 RABL6Q3YEC7 729 aaPredicted RBP16.77■□□□□ 0.28
AL355102.3-201ENST00000554299 PPP4R3CPQ6ZMV5 832 aa16.77■□□□□ 0.28
AL355102.3-201ENST00000554299 MYD88Q99836 296 aa16.77■□□□□ 0.28
AL355102.3-201ENST00000554299 TM6SF1Q9BZW5 370 aa16.77■□□□□ 0.28
AL355102.3-201ENST00000554299 SOS2Q07890 1332 aaPredicted RBP16.77■□□□□ 0.27
AL355102.3-201ENST00000554299 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
AL355102.3-201ENST00000554299 ZNF445P59923 1031 aa16.76■□□□□ 0.27
AL355102.3-201ENST00000554299 CWC27Q6UX04 472 aaKnown RBP16.76■□□□□ 0.27
AL355102.3-201ENST00000554299 EAF2Q96CJ1 260 aaPredicted RBP16.76■□□□□ 0.27
AL355102.3-201ENST00000554299 USP16Q9Y5T5 823 aa16.76■□□□□ 0.27
AL355102.3-201ENST00000554299 NKX1-1Q15270 411 aaPredicted RBP16.75■□□□□ 0.27
AL355102.3-201ENST00000554299 PLBD2Q8NHP8 589 aa16.75■□□□□ 0.27
AL355102.3-201ENST00000554299 UPF3BQ9BZI7 483 aaKnown RBP16.75■□□□□ 0.27
AL355102.3-201ENST00000554299 XIRP1Q702N8 1843 aaKnown RBP16.74■□□□□ 0.27
AL355102.3-201ENST00000554299 RFX5P48382 616 aaPredicted RBP16.74■□□□□ 0.27
AL355102.3-201ENST00000554299 GAS2L3Q86XJ1 694 aa16.74■□□□□ 0.27
AL355102.3-201ENST00000554299 RASEFQ8IZ41 740 aa16.74■□□□□ 0.27
AL355102.3-201ENST00000554299 ZCRB1Q8TBF4 217 aaKnown RBP16.74■□□□□ 0.27
AL355102.3-201ENST00000554299 RFX7Q2KHR2 1363 aa16.74■□□□□ 0.27
AL355102.3-201ENST00000554299 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
AL355102.3-201ENST00000554299 EPHA10Q5JZY3 1008 aa16.73■□□□□ 0.27
AL355102.3-201ENST00000554299 PANK2Q9BZ23 570 aa16.73■□□□□ 0.27
AL355102.3-201ENST00000554299 PRDM11Q9NQV5 511 aa16.73■□□□□ 0.27
AL355102.3-201ENST00000554299 LIMCH1Q9UPQ0 1083 aa16.73■□□□□ 0.27
AL355102.3-201ENST00000554299 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
AL355102.3-201ENST00000554299 WDR33Q9C0J8 1336 aaKnown RBP16.73■□□□□ 0.27
AL355102.3-201ENST00000554299 MBD3O95983 291 aa16.72■□□□□ 0.27
AL355102.3-201ENST00000554299 CASP7P55210 303 aa16.72■□□□□ 0.27
AL355102.3-201ENST00000554299 VPS53Q5VIR6 699 aa16.72■□□□□ 0.27
AL355102.3-201ENST00000554299 CARD10Q9BWT7 1032 aa16.72■□□□□ 0.27
AL355102.3-201ENST00000554299 NECTIN1Q15223 517 aa16.72■□□□□ 0.27
AL355102.3-201ENST00000554299 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms