RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 PIP4K2AP48426 406 aaPredicted RBP9.64□□□□□ -0.87
TDP1-209ENST00000554180 EIF5P55010 431 aaKnown RBP9.64□□□□□ -0.87
TDP1-209ENST00000554180 AIMP1Q12904 312 aaKnown RBP9.64□□□□□ -0.87
TDP1-209ENST00000554180 INTS5Q6P9B9 1019 aaKnown RBP9.64□□□□□ -0.87
TDP1-209ENST00000554180 KIF6Q6ZMV9 814 aa9.64□□□□□ -0.87
TDP1-209ENST00000554180 ILDR2Q71H61 639 aa9.64□□□□□ -0.87
TDP1-209ENST00000554180 NPM2Q86SE8 214 aaKnown RBP9.64□□□□□ -0.87
TDP1-209ENST00000554180 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
TDP1-209ENST00000554180 A0A087WZG4 1122 aa9.63□□□□□ -0.87
TDP1-209ENST00000554180 ERVV-1B6SEH8 477 aa9.63□□□□□ -0.87
TDP1-209ENST00000554180 SOCS7O14512 581 aa9.63□□□□□ -0.87
TDP1-209ENST00000554180 PLSCR1O15162 318 aa9.63□□□□□ -0.87
TDP1-209ENST00000554180 LINC00116Q8NCU8 138 aa9.63□□□□□ -0.87
TDP1-209ENST00000554180 HDAC5Q9UQL6 1122 aa9.63□□□□□ -0.87
TDP1-209ENST00000554180 MAP3K15Q6ZN16 1313 aa9.62□□□□□ -0.87
TDP1-209ENST00000554180 HSP90AB3PQ58FF7 597 aa9.62□□□□□ -0.87
TDP1-209ENST00000554180 B4GALNT3Q6L9W6 998 aa9.62□□□□□ -0.87
TDP1-209ENST00000554180 TTLL7Q6ZT98 887 aa9.62□□□□□ -0.87
TDP1-209ENST00000554180 MEIS3Q99687 375 aa9.62□□□□□ -0.87
TDP1-209ENST00000554180 RGPD3A6NKT7 1758 aaPredicted RBP9.62□□□□□ -0.87
TDP1-209ENST00000554180 RGPD4Q7Z3J3 1758 aa9.62□□□□□ -0.87
TDP1-209ENST00000554180 COL15A1P39059 1388 aa9.62□□□□□ -0.87
TDP1-209ENST00000554180 UTYO14607 1347 aa9.61□□□□□ -0.87
TDP1-209ENST00000554180 ARFGEF2Q9Y6D5 1785 aa9.61□□□□□ -0.87
TDP1-209ENST00000554180 NEURL1BA8MQ27 555 aa9.61□□□□□ -0.87
TDP1-209ENST00000554180 IGKV5-2P06315 115 aa9.61□□□□□ -0.87
TDP1-209ENST00000554180 UBTFL1P0CB47 393 aaPredicted RBP9.61□□□□□ -0.87
TDP1-209ENST00000554180 TRIM28Q13263 835 aaKnown RBP9.61□□□□□ -0.87
TDP1-209ENST00000554180 HDAC1Q13547 482 aaPredicted RBP9.61□□□□□ -0.87
TDP1-209ENST00000554180 GIGYF2Q6Y7W6 1299 aaKnown RBP9.61□□□□□ -0.87
TDP1-209ENST00000554180 CENPQQ7L2Z9 268 aaPredicted RBP9.61□□□□□ -0.87
TDP1-209ENST00000554180 DZIP3Q86Y13 1208 aaKnown RBP9.61□□□□□ -0.87
TDP1-209ENST00000554180 USP44Q9H0E7 712 aa9.61□□□□□ -0.87
TDP1-209ENST00000554180 ZNF330Q9Y3S2 320 aaPredicted RBP9.61□□□□□ -0.87
TDP1-209ENST00000554180 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
TDP1-209ENST00000554180 NUP188Q5SRE5 1749 aa9.61□□□□□ -0.87
TDP1-209ENST00000554180 KDM2BQ8NHM5 1336 aa9.6□□□□□ -0.87
TDP1-209ENST00000554180 GRM8O00222 908 aa9.6□□□□□ -0.87
TDP1-209ENST00000554180 RPS6KA4O75676 772 aa9.6□□□□□ -0.87
TDP1-209ENST00000554180 GNAI2P04899 355 aa9.6□□□□□ -0.87
TDP1-209ENST00000554180 ADRA2BP18089 450 aa9.6□□□□□ -0.87
TDP1-209ENST00000554180 TCIRG1Q13488 830 aa9.6□□□□□ -0.87
TDP1-209ENST00000554180 GCKRQ14397 625 aa9.6□□□□□ -0.87
TDP1-209ENST00000554180 RPAP2Q8IXW5 612 aaPredicted RBP9.6□□□□□ -0.87
TDP1-209ENST00000554180 CCDC191Q8NCU4 936 aa9.6□□□□□ -0.87
TDP1-209ENST00000554180 MYD88Q99836 296 aa9.6□□□□□ -0.87
TDP1-209ENST00000554180 RWDD1Q9H446 243 aaPredicted RBP9.6□□□□□ -0.87
TDP1-209ENST00000554180 ZBTB3Q9H5J0 574 aa9.6□□□□□ -0.87
TDP1-209ENST00000554180 MYH14Q7Z406 1995 aaKnown RBP9.6□□□□□ -0.87
TDP1-209ENST00000554180 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
TDP1-209ENST00000554180 TNS1Q9HBL0 1735 aaKnown RBP9.59□□□□□ -0.87
TDP1-209ENST00000554180 TAF1LQ8IZX4 1826 aa9.59□□□□□ -0.87
TDP1-209ENST00000554180 GNPATO15228 680 aa9.59□□□□□ -0.87
TDP1-209ENST00000554180 APBA3O96018 575 aa9.59□□□□□ -0.87
TDP1-209ENST00000554180 TXNRD1Q16881 649 aa9.59□□□□□ -0.87
TDP1-209ENST00000554180 CWF19L2Q2TBE0 894 aaKnown RBP9.59□□□□□ -0.87
TDP1-209ENST00000554180 CLEC4GQ6UXB4 293 aa9.59□□□□□ -0.87
TDP1-209ENST00000554180 AK7Q96M32 723 aa9.59□□□□□ -0.87
TDP1-209ENST00000554180 ISCA1Q9BUE6 129 aa9.59□□□□□ -0.87
TDP1-209ENST00000554180 LRRC4BQ9NT99 713 aa9.59□□□□□ -0.87
TDP1-209ENST00000554180 C9orf78Q9NZ63 289 aaPredicted RBP9.59□□□□□ -0.87
TDP1-209ENST00000554180 ZNF652Q9Y2D9 606 aa9.59□□□□□ -0.87
TDP1-209ENST00000554180 RTCBQ9Y3I0 505 aaKnown RBP9.59□□□□□ -0.87
TDP1-209ENST00000554180 HMMRO75330 724 aa9.58□□□□□ -0.88
TDP1-209ENST00000554180 CAMTA2O94983 1202 aa9.58□□□□□ -0.88
TDP1-209ENST00000554180 KCNQ4P56696 695 aa9.58□□□□□ -0.88
TDP1-209ENST00000554180 CEP85Q6P2H3 762 aa9.58□□□□□ -0.88
TDP1-209ENST00000554180 ANKRD44Q8N8A2 993 aa9.58□□□□□ -0.88
TDP1-209ENST00000554180 CWC25Q9NXE8 425 aaPredicted RBP9.58□□□□□ -0.88
TDP1-209ENST00000554180 NBPF7P0C2Y1 421 aaPredicted RBP9.57□□□□□ -0.88
TDP1-209ENST00000554180 SSFA2P28290 1259 aa9.57□□□□□ -0.88
TDP1-209ENST00000554180 MTX1Q13505 466 aa9.57□□□□□ -0.88
TDP1-209ENST00000554180 PARP10Q53GL7 1025 aa9.57□□□□□ -0.88
TDP1-209ENST00000554180 PROM2Q8N271 834 aa9.57□□□□□ -0.88
TDP1-209ENST00000554180 C1orf115Q9H7X2 142 aa9.57□□□□□ -0.88
TDP1-209ENST00000554180 NARFQ9UHQ1 456 aa9.57□□□□□ -0.88
TDP1-209ENST00000554180 TBC1D2BQ9UPU7 963 aa9.57□□□□□ -0.88
TDP1-209ENST00000554180 LRRFIP2Q9Y608 721 aaKnown RBP9.57□□□□□ -0.88
TDP1-209ENST00000554180 SCN7AQ01118 1682 aa9.57□□□□□ -0.88
TDP1-209ENST00000554180 BCORQ6W2J9 1755 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 ATP5J2-PTCD1G3V325 749 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 H7C1W4 665 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 SF3B2Q13435 895 aaKnown RBP9.56□□□□□ -0.88
TDP1-209ENST00000554180 HLFQ16534 295 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 NLRP10Q86W26 655 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 SIRT2Q8IXJ6 389 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 SMC5Q8IY18 1101 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 ZNF34Q8IZ26 560 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 GCC1Q96CN9 775 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 ARXQ96QS3 562 aa9.56□□□□□ -0.88
TDP1-209ENST00000554180 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
TDP1-209ENST00000554180 ANKRD36CQ5JPF3 1778 aa9.55□□□□□ -0.88
TDP1-209ENST00000554180 ZPR1O75312 459 aa9.55□□□□□ -0.88
TDP1-209ENST00000554180 IGHDP01880 384 aa9.55□□□□□ -0.88
TDP1-209ENST00000554180 PCCAP05165 728 aaPredicted RBP9.55□□□□□ -0.88
TDP1-209ENST00000554180 BAG6P46379 1132 aa9.55□□□□□ -0.88
TDP1-209ENST00000554180 CASP7P55210 303 aa9.55□□□□□ -0.88
TDP1-209ENST00000554180 ATP8B2P98198 1209 aa9.55□□□□□ -0.88
TDP1-209ENST00000554180 TRAPPC3LQ5T215 181 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms