RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 NEUROD2Q15784 382 aa16.85■□□□□ 0.29
XRCC3-206ENST00000554170 TNS4Q8IZW8 715 aa16.85■□□□□ 0.29
XRCC3-206ENST00000554170 SLX4Q8IY92 1834 aa16.84■□□□□ 0.29
XRCC3-206ENST00000554170 POTECB2RU33 542 aa16.84■□□□□ 0.29
XRCC3-206ENST00000554170 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
XRCC3-206ENST00000554170 PDZRN3Q9UPQ7 1066 aa16.84■□□□□ 0.29
XRCC3-206ENST00000554170 CAPN15O75808 1086 aa16.83■□□□□ 0.28
XRCC3-206ENST00000554170 PDE6BP35913 854 aa16.83■□□□□ 0.28
XRCC3-206ENST00000554170 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
XRCC3-206ENST00000554170 TBC1D9BQ66K14 1250 aa16.83■□□□□ 0.28
XRCC3-206ENST00000554170 DPY19L2Q6NUT2 758 aa16.83■□□□□ 0.28
XRCC3-206ENST00000554170 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
XRCC3-206ENST00000554170 BCORQ6W2J9 1755 aa16.83■□□□□ 0.28
XRCC3-206ENST00000554170 ZNF622Q969S3 477 aaKnown RBP eCLIP16.83■□□□□ 0.28
XRCC3-206ENST00000554170 BRIP1Q9BX63 1249 aa16.83■□□□□ 0.28
XRCC3-206ENST00000554170 RRP7AQ9Y3A4 280 aaKnown RBP16.83■□□□□ 0.28
XRCC3-206ENST00000554170 HSPA1AP0DMV8 641 aaKnown RBP16.82■□□□□ 0.28
XRCC3-206ENST00000554170 HSPA1BP0DMV9 641 aaKnown RBP16.82■□□□□ 0.28
XRCC3-206ENST00000554170 DIEXFQ68CQ4 756 aaKnown RBP16.82■□□□□ 0.28
XRCC3-206ENST00000554170 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
XRCC3-206ENST00000554170 HEG1Q9ULI3 1381 aa16.81■□□□□ 0.28
XRCC3-206ENST00000554170 C21orf2O43822 256 aa16.81■□□□□ 0.28
XRCC3-206ENST00000554170 ERFEQ4G0M1 354 aa16.81■□□□□ 0.28
XRCC3-206ENST00000554170 PRR5LQ6MZQ0 368 aa16.81■□□□□ 0.28
XRCC3-206ENST00000554170 FMNL2Q96PY5 1086 aa16.81■□□□□ 0.28
XRCC3-206ENST00000554170 LTBP3Q9NS15 1303 aa16.8■□□□□ 0.28
XRCC3-206ENST00000554170 APAF1O14727 1248 aa16.8■□□□□ 0.28
XRCC3-206ENST00000554170 TEX13AQ9BXU3 409 aaPredicted RBP16.8■□□□□ 0.28
XRCC3-206ENST00000554170 TBC1D2BQ9UPU7 963 aa16.8■□□□□ 0.28
XRCC3-206ENST00000554170 DLG5Q8TDM6 1919 aa16.8■□□□□ 0.28
XRCC3-206ENST00000554170 IL6STP40189 918 aaPredicted RBP16.79■□□□□ 0.28
XRCC3-206ENST00000554170 FAM9BQ8IZU0 186 aa16.79■□□□□ 0.28
XRCC3-206ENST00000554170 CCDC24Q8N4L8 307 aa16.79■□□□□ 0.28
XRCC3-206ENST00000554170 THUMPD2Q9BTF0 503 aaKnown RBP16.79■□□□□ 0.28
XRCC3-206ENST00000554170 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
XRCC3-206ENST00000554170 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
XRCC3-206ENST00000554170 ZNF330Q9Y3S2 320 aaPredicted RBP16.79■□□□□ 0.28
XRCC3-206ENST00000554170 SCN4AP35499 1836 aa16.79■□□□□ 0.28
XRCC3-206ENST00000554170 KCNQ3O43525 872 aa16.77■□□□□ 0.28
XRCC3-206ENST00000554170 CNBD1Q8NA66 436 aa16.77■□□□□ 0.28
XRCC3-206ENST00000554170 CNKSR1Q969H4 720 aa16.77■□□□□ 0.28
XRCC3-206ENST00000554170 SETDB2Q96T68 719 aa16.77■□□□□ 0.28
XRCC3-206ENST00000554170 CREBZFQ9NS37 354 aa16.77■□□□□ 0.28
XRCC3-206ENST00000554170 MIS18AQ9NYP9 233 aa16.77■□□□□ 0.28
XRCC3-206ENST00000554170 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
XRCC3-206ENST00000554170 STYK1Q6J9G0 422 aa16.76■□□□□ 0.27
XRCC3-206ENST00000554170 CHADLQ6NUI6 762 aa16.76■□□□□ 0.27
XRCC3-206ENST00000554170 PRPF40BQ6NWY9 871 aaKnown RBP16.76■□□□□ 0.27
XRCC3-206ENST00000554170 BABAM1Q9NWV8 329 aa16.76■□□□□ 0.27
XRCC3-206ENST00000554170 TRIM35Q9UPQ4 493 aa16.76■□□□□ 0.27
XRCC3-206ENST00000554170 NPHP1O15259 732 aa16.75■□□□□ 0.27
XRCC3-206ENST00000554170 CAMTA2O94983 1202 aa16.75■□□□□ 0.27
XRCC3-206ENST00000554170 A1BGP04217 495 aa16.75■□□□□ 0.27
XRCC3-206ENST00000554170 SRGNP10124 158 aa16.75■□□□□ 0.27
XRCC3-206ENST00000554170 CALD1Q05682 793 aaKnown RBP16.75■□□□□ 0.27
XRCC3-206ENST00000554170 SOGA3Q5TF21 947 aa16.75■□□□□ 0.27
XRCC3-206ENST00000554170 NPM2Q86SE8 214 aaKnown RBP16.75■□□□□ 0.27
XRCC3-206ENST00000554170 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
XRCC3-206ENST00000554170 DDNO94850 711 aaPredicted RBP16.74■□□□□ 0.27
XRCC3-206ENST00000554170 SNRPA1P09661 255 aaKnown RBP16.74■□□□□ 0.27
XRCC3-206ENST00000554170 POTEIP0CG38 1075 aa16.74■□□□□ 0.27
XRCC3-206ENST00000554170 POTEJP0CG39 1038 aa16.74■□□□□ 0.27
XRCC3-206ENST00000554170 ST5P78524 1137 aa16.74■□□□□ 0.27
XRCC3-206ENST00000554170 MASTLQ96GX5 879 aa16.74■□□□□ 0.27
XRCC3-206ENST00000554170 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
XRCC3-206ENST00000554170 MKRN1Q9UHC7 482 aaKnown RBP16.73■□□□□ 0.27
XRCC3-206ENST00000554170 IQCA1LA6NCM1 817 aa16.72■□□□□ 0.27
XRCC3-206ENST00000554170 DZIP3Q86Y13 1208 aaKnown RBP16.72■□□□□ 0.27
XRCC3-206ENST00000554170 EIF4A1P60842 406 aaKnown RBP16.71■□□□□ 0.27
XRCC3-206ENST00000554170 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
XRCC3-206ENST00000554170 L3MBTL3Q96JM7 780 aaPredicted RBP16.71■□□□□ 0.27
XRCC3-206ENST00000554170 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
XRCC3-206ENST00000554170 CNTNAP1P78357 1384 aa16.7■□□□□ 0.26
XRCC3-206ENST00000554170 CCDC27Q2M243 656 aa16.7■□□□□ 0.26
XRCC3-206ENST00000554170 CLEC4GQ6UXB4 293 aa16.7■□□□□ 0.26
XRCC3-206ENST00000554170 LDHDQ86WU2 507 aa16.7■□□□□ 0.26
XRCC3-206ENST00000554170 NBPF5PQ86XG9 351 aaPredicted RBP16.7■□□□□ 0.26
XRCC3-206ENST00000554170 C7orf43Q8WVR3 580 aa16.7■□□□□ 0.26
XRCC3-206ENST00000554170 ADAMTSL1Q8N6G6 1762 aa16.69■□□□□ 0.26
XRCC3-206ENST00000554170 CHL1O00533 1208 aa16.69■□□□□ 0.26
XRCC3-206ENST00000554170 CCDC93Q567U6 631 aa16.69■□□□□ 0.26
XRCC3-206ENST00000554170 CFAP44Q96MT7 982 aa16.69■□□□□ 0.26
XRCC3-206ENST00000554170 USP16Q9Y5T5 823 aa16.69■□□□□ 0.26
XRCC3-206ENST00000554170 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
XRCC3-206ENST00000554170 NPR1P16066 1061 aa16.68■□□□□ 0.26
XRCC3-206ENST00000554170 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
XRCC3-206ENST00000554170 GNAI1P63096 354 aa16.68■□□□□ 0.26
XRCC3-206ENST00000554170 MIER1Q8N108 512 aa16.68■□□□□ 0.26
XRCC3-206ENST00000554170 NGEFQ8N5V2 710 aa16.68■□□□□ 0.26
XRCC3-206ENST00000554170 TAF1DQ9H5J8 278 aaPredicted RBP16.68■□□□□ 0.26
XRCC3-206ENST00000554170 IFT57Q9NWB7 429 aa16.68■□□□□ 0.26
XRCC3-206ENST00000554170 ZNF652Q9Y2D9 606 aa16.68■□□□□ 0.26
XRCC3-206ENST00000554170 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
XRCC3-206ENST00000554170 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
XRCC3-206ENST00000554170 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
XRCC3-206ENST00000554170 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
XRCC3-206ENST00000554170 KLRG2A4D1S0 409 aaPredicted RBP16.66■□□□□ 0.26
XRCC3-206ENST00000554170 FOXN1O15353 648 aa16.66■□□□□ 0.26
XRCC3-206ENST00000554170 FKBP4Q02790 459 aaKnown RBP eCLIP16.66■□□□□ 0.26
XRCC3-206ENST00000554170 ZNF541Q9H0D2 1346 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms