RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 KSR2Q6VAB6 950 aa17.35■□□□□ 0.37
PSMC6-205ENST00000553899 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
PSMC6-205ENST00000553899 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
PSMC6-205ENST00000553899 NLGN1Q8N2Q7 840 aa17.35■□□□□ 0.37
PSMC6-205ENST00000553899 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
PSMC6-205ENST00000553899 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
PSMC6-205ENST00000553899 CASZ1Q86V15 1759 aa17.35■□□□□ 0.37
PSMC6-205ENST00000553899 NUP98P52948 1817 aa17.34■□□□□ 0.37
PSMC6-205ENST00000553899 TRIM28Q13263 835 aaKnown RBP17.34■□□□□ 0.37
PSMC6-205ENST00000553899 GIGYF2Q6Y7W6 1299 aaKnown RBP17.34■□□□□ 0.37
PSMC6-205ENST00000553899 ATP10DQ9P241 1426 aa17.33■□□□□ 0.36
PSMC6-205ENST00000553899 ANXA1P04083 346 aa17.33■□□□□ 0.36
PSMC6-205ENST00000553899 MS4A1P11836 297 aa17.33■□□□□ 0.36
PSMC6-205ENST00000553899 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
PSMC6-205ENST00000553899 API5Q9BZZ5 524 aaKnown RBP17.33■□□□□ 0.36
PSMC6-205ENST00000553899 ARFGEF2Q9Y6D5 1785 aa17.33■□□□□ 0.36
PSMC6-205ENST00000553899 GYS1P13807 737 aa17.32■□□□□ 0.36
PSMC6-205ENST00000553899 FKBP5Q13451 457 aaPredicted RBP17.32■□□□□ 0.36
PSMC6-205ENST00000553899 TTLL7Q6ZT98 887 aa17.32■□□□□ 0.36
PSMC6-205ENST00000553899 G2E3Q7L622 706 aa17.32■□□□□ 0.36
PSMC6-205ENST00000553899 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.32■□□□□ 0.36
PSMC6-205ENST00000553899 TBC1D2BQ9UPU7 963 aa17.32■□□□□ 0.36
PSMC6-205ENST00000553899 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
PSMC6-205ENST00000553899 ANKRD36CQ5JPF3 1778 aa17.31■□□□□ 0.36
PSMC6-205ENST00000553899 PI4KAP2A4QPH2 592 aa17.31■□□□□ 0.36
PSMC6-205ENST00000553899 BCAR3O75815 825 aa17.31■□□□□ 0.36
PSMC6-205ENST00000553899 PHF14O94880 888 aa17.31■□□□□ 0.36
PSMC6-205ENST00000553899 PI4KAP1Q8N8J0 262 aa17.31■□□□□ 0.36
PSMC6-205ENST00000553899 METTL22Q9BUU2 404 aaPredicted RBP17.31■□□□□ 0.36
PSMC6-205ENST00000553899 ZNF330Q9Y3S2 320 aaPredicted RBP17.31■□□□□ 0.36
PSMC6-205ENST00000553899 ADCY9O60503 1353 aa17.3■□□□□ 0.36
PSMC6-205ENST00000553899 TCERG1O14776 1098 aaKnown RBP17.3■□□□□ 0.36
PSMC6-205ENST00000553899 AIMP1Q12904 312 aaKnown RBP17.3■□□□□ 0.36
PSMC6-205ENST00000553899 TCIRG1Q13488 830 aa17.3■□□□□ 0.36
PSMC6-205ENST00000553899 R3HDM1Q15032 1099 aaKnown RBP17.3■□□□□ 0.36
PSMC6-205ENST00000553899 USPL1Q5W0Q7 1092 aa17.3■□□□□ 0.36
PSMC6-205ENST00000553899 ZKSCAN2Q63HK3 967 aa17.3■□□□□ 0.36
PSMC6-205ENST00000553899 ATF7IPQ6VMQ6 1270 aa17.3■□□□□ 0.36
PSMC6-205ENST00000553899 RIC3Q7Z5B4 369 aa17.3■□□□□ 0.36
PSMC6-205ENST00000553899 NOB1Q9ULX3 412 aaKnown RBP17.3■□□□□ 0.36
PSMC6-205ENST00000553899 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
PSMC6-205ENST00000553899 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
PSMC6-205ENST00000553899 CENPBP07199 599 aaPredicted RBP17.29■□□□□ 0.36
PSMC6-205ENST00000553899 NEXNQ0ZGT2 675 aa17.29■□□□□ 0.36
PSMC6-205ENST00000553899 ZNF34Q8IZ26 560 aa17.29■□□□□ 0.36
PSMC6-205ENST00000553899 DNAAF4Q8WXU2 420 aa17.29■□□□□ 0.36
PSMC6-205ENST00000553899 BCL2L13Q9BXK5 485 aa17.29■□□□□ 0.36
PSMC6-205ENST00000553899 MTFR1LQ9H019 292 aa17.29■□□□□ 0.36
PSMC6-205ENST00000553899 BCL2L12Q9HB09 334 aa17.29■□□□□ 0.36
PSMC6-205ENST00000553899 TM4SF1P30408 202 aa17.28■□□□□ 0.36
PSMC6-205ENST00000553899 PARP10Q53GL7 1025 aa17.28■□□□□ 0.36
PSMC6-205ENST00000553899 LINS1Q8NG48 757 aa17.28■□□□□ 0.36
PSMC6-205ENST00000553899 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
PSMC6-205ENST00000553899 PDE3AQ14432 1141 aa17.27■□□□□ 0.36
PSMC6-205ENST00000553899 HLFQ16534 295 aa17.27■□□□□ 0.36
PSMC6-205ENST00000553899 CCDC191Q8NCU4 936 aa17.27■□□□□ 0.36
PSMC6-205ENST00000553899 ARXQ96QS3 562 aa17.27■□□□□ 0.36
PSMC6-205ENST00000553899 ISCA1Q9BUE6 129 aa17.27■□□□□ 0.36
PSMC6-205ENST00000553899 ZBTB3Q9H5J0 574 aa17.27■□□□□ 0.36
PSMC6-205ENST00000553899 SRP68Q9UHB9 627 aaKnown RBP17.27■□□□□ 0.36
PSMC6-205ENST00000553899 ABCC4O15439 1325 aa17.26■□□□□ 0.35
PSMC6-205ENST00000553899 ALDH1L1O75891 902 aa17.26■□□□□ 0.35
PSMC6-205ENST00000553899 TRIM27P14373 513 aa17.26■□□□□ 0.35
PSMC6-205ENST00000553899 CCT4P50991 539 aaKnown RBP17.26■□□□□ 0.35
PSMC6-205ENST00000553899 SETDB2Q96T68 719 aa17.26■□□□□ 0.35
PSMC6-205ENST00000553899 CARMIL3Q8ND23 1372 aa17.26■□□□□ 0.35
PSMC6-205ENST00000553899 FKBP8Q14318 412 aa17.25■□□□□ 0.35
PSMC6-205ENST00000553899 BEND3Q5T5X7 828 aa17.25■□□□□ 0.35
PSMC6-205ENST00000553899 INTS3Q68E01 1043 aaKnown RBP17.25■□□□□ 0.35
PSMC6-205ENST00000553899 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
PSMC6-205ENST00000553899 FRAT1Q92837 279 aaPredicted RBP17.24■□□□□ 0.35
PSMC6-205ENST00000553899 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
PSMC6-205ENST00000553899 NRXN2Q9P2S2 1712 aa17.24■□□□□ 0.35
PSMC6-205ENST00000553899 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
PSMC6-205ENST00000553899 NFIXQ14938 502 aa17.23■□□□□ 0.35
PSMC6-205ENST00000553899 TBC1D9BQ66K14 1250 aa17.23■□□□□ 0.35
PSMC6-205ENST00000553899 PPP1R42Q7Z4L9 355 aa17.23■□□□□ 0.35
PSMC6-205ENST00000553899 NLRP10Q86W26 655 aa17.23■□□□□ 0.35
PSMC6-205ENST00000553899 DZIP1LQ8IYY4 767 aaKnown RBP17.23■□□□□ 0.35
PSMC6-205ENST00000553899 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
PSMC6-205ENST00000553899 NIP7Q9Y221 180 aaKnown RBP eCLIP17.23■□□□□ 0.35
PSMC6-205ENST00000553899 NEURL1BA8MQ27 555 aa17.22■□□□□ 0.35
PSMC6-205ENST00000553899 IGKV5-2P06315 115 aa17.22■□□□□ 0.35
PSMC6-205ENST00000553899 TPTE2Q6XPS3 522 aa17.22■□□□□ 0.35
PSMC6-205ENST00000553899 PDGFDQ9GZP0 370 aaPredicted RBP17.22■□□□□ 0.35
PSMC6-205ENST00000553899 CWC25Q9NXE8 425 aaPredicted RBP17.22■□□□□ 0.35
PSMC6-205ENST00000553899 RIC1Q4ADV7 1423 aa17.21■□□□□ 0.35
PSMC6-205ENST00000553899 F6X3S4 739 aa17.21■□□□□ 0.35
PSMC6-205ENST00000553899 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.35
PSMC6-205ENST00000553899 MYD88Q99836 296 aa17.21■□□□□ 0.35
PSMC6-205ENST00000553899 SGIP1Q9BQI5 828 aa17.21■□□□□ 0.35
PSMC6-205ENST00000553899 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
PSMC6-205ENST00000553899 HDAC5Q9UQL6 1122 aa17.21■□□□□ 0.35
PSMC6-205ENST00000553899 AFDNP55196 1824 aaKnown RBP17.21■□□□□ 0.35
PSMC6-205ENST00000553899 UTYO14607 1347 aa17.21■□□□□ 0.34
PSMC6-205ENST00000553899 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.34
PSMC6-205ENST00000553899 PSDA5PKW4 1024 aaPredicted RBP17.2■□□□□ 0.34
PSMC6-205ENST00000553899 POLRMTO00411 1230 aaKnown RBP17.2■□□□□ 0.34
PSMC6-205ENST00000553899 MMP10P09238 476 aa17.2■□□□□ 0.34
PSMC6-205ENST00000553899 POLD1P28340 1107 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms