RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 TXLNAP40222 546 aa6.96□□□□□ -1.3
LINC00648-201ENST00000553747 TRIM28Q13263 835 aaKnown RBP6.96□□□□□ -1.3
LINC00648-201ENST00000553747 STARD13Q9Y3M8 1113 aa6.96□□□□□ -1.3
LINC00648-201ENST00000553747 TMEM229AB2RXF0 380 aa6.95□□□□□ -1.3
LINC00648-201ENST00000553747 UBTFP17480 764 aaKnown RBP6.95□□□□□ -1.3
LINC00648-201ENST00000553747 SLC30A3Q99726 388 aa6.95□□□□□ -1.3
LINC00648-201ENST00000553747 MDFIQ99750 246 aa6.95□□□□□ -1.3
LINC00648-201ENST00000553747 ZDHHC3Q9NYG2 299 aa6.95□□□□□ -1.3
LINC00648-201ENST00000553747 IQSEC3Q9UPP2 1182 aaPredicted RBP6.95□□□□□ -1.3
LINC00648-201ENST00000553747 COG6Q9Y2V7 657 aa6.95□□□□□ -1.3
LINC00648-201ENST00000553747 A6NJY4 79 aa6.94□□□□□ -1.3
LINC00648-201ENST00000553747 SFSWAPQ12872 951 aaKnown RBP6.94□□□□□ -1.3
LINC00648-201ENST00000553747 SEMA3FQ13275 785 aa6.94□□□□□ -1.3
LINC00648-201ENST00000553747 LRRC69Q6ZNQ3 347 aa6.94□□□□□ -1.3
LINC00648-201ENST00000553747 RAB44Q7Z6P3 723 aaPredicted RBP6.94□□□□□ -1.3
LINC00648-201ENST00000553747 MICALL1Q8N3F8 863 aa6.94□□□□□ -1.3
LINC00648-201ENST00000553747 SIRT1Q96EB6 747 aa6.94□□□□□ -1.3
LINC00648-201ENST00000553747 CDK2AP1O14519 115 aa6.93□□□□□ -1.3
LINC00648-201ENST00000553747 SOX11P35716 441 aa6.93□□□□□ -1.3
LINC00648-201ENST00000553747 SAMD5Q5TGI4 173 aa6.93□□□□□ -1.3
LINC00648-201ENST00000553747 CHIC2Q9UKJ5 165 aa6.93□□□□□ -1.3
LINC00648-201ENST00000553747 HYAL3O43820 417 aaPredicted RBP6.92□□□□□ -1.3
LINC00648-201ENST00000553747 NID1P14543 1247 aa6.92□□□□□ -1.3
LINC00648-201ENST00000553747 POM121Q96HA1 1249 aa6.92□□□□□ -1.3
LINC00648-201ENST00000553747 NACC1Q96RE7 527 aa6.92□□□□□ -1.3
LINC00648-201ENST00000553747 ADARB2-AS1A8MUL3 147 aa6.91□□□□□ -1.3
LINC00648-201ENST00000553747 SIN3BO75182 1162 aa6.91□□□□□ -1.3
LINC00648-201ENST00000553747 LAMC2Q13753 1193 aa6.91□□□□□ -1.3
LINC00648-201ENST00000553747 LRP8Q14114 963 aa6.91□□□□□ -1.3
LINC00648-201ENST00000553747 MTFR1Q15390 333 aa6.91□□□□□ -1.3
LINC00648-201ENST00000553747 PLPP7Q8NBV4 271 aa6.91□□□□□ -1.3
LINC00648-201ENST00000553747 ZDHHC1Q8WTX9 485 aa6.91□□□□□ -1.3
LINC00648-201ENST00000553747 SLC4A9Q96Q91 983 aa6.91□□□□□ -1.3
LINC00648-201ENST00000553747 ADH7P40394 386 aa6.9□□□□□ -1.3
LINC00648-201ENST00000553747 TRAPPC3LQ5T215 181 aa6.9□□□□□ -1.3
LINC00648-201ENST00000553747 SELPP16109 830 aa6.89□□□□□ -1.31
LINC00648-201ENST00000553747 MBTPS1Q14703 1052 aa6.89□□□□□ -1.31
LINC00648-201ENST00000553747 TBCELQ5QJ74 424 aa6.89□□□□□ -1.31
LINC00648-201ENST00000553747 SHISA2Q6UWI4 295 aa6.89□□□□□ -1.31
LINC00648-201ENST00000553747 ADGRE1Q14246 886 aa6.88□□□□□ -1.31
LINC00648-201ENST00000553747 TNFRSF25Q93038 417 aa6.88□□□□□ -1.31
LINC00648-201ENST00000553747 L3MBTL2Q969R5 705 aa6.88□□□□□ -1.31
LINC00648-201ENST00000553747 PRDM6Q9NQX0 595 aa6.88□□□□□ -1.31
LINC00648-201ENST00000553747 C9orf172C9J069 976 aa6.87□□□□□ -1.31
LINC00648-201ENST00000553747 H2AFB1P0C5Y9 115 aa6.87□□□□□ -1.31
LINC00648-201ENST00000553747 H2AFB2P0C5Z0 115 aa6.87□□□□□ -1.31
LINC00648-201ENST00000553747 TBC1D8BQ0IIM8 1120 aa6.87□□□□□ -1.31
LINC00648-201ENST00000553747 SPEM2Q0P670 501 aa6.87□□□□□ -1.31
LINC00648-201ENST00000553747 SH3PXD2AQ5TCZ1 1133 aa6.87□□□□□ -1.31
LINC00648-201ENST00000553747 C20orf204Q6ZNR8 217 aa6.87□□□□□ -1.31
LINC00648-201ENST00000553747 TP53INP1Q96A56 240 aa6.87□□□□□ -1.31
LINC00648-201ENST00000553747 NEUROD4Q9HD90 331 aa6.87□□□□□ -1.31
LINC00648-201ENST00000553747 PCDHGA11Q9Y5H2 935 aa6.87□□□□□ -1.31
LINC00648-201ENST00000553747 A0A0A0MRY4 1105 aa6.86□□□□□ -1.31
LINC00648-201ENST00000553747 MAP7D1Q3KQU3 841 aa6.86□□□□□ -1.31
LINC00648-201ENST00000553747 TXNRD3Q86VQ6 643 aa6.86□□□□□ -1.31
LINC00648-201ENST00000553747 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.86□□□□□ -1.31
LINC00648-201ENST00000553747 ZNF232Q9UNY5 417 aa6.86□□□□□ -1.31
LINC00648-201ENST00000553747 PIK3CDO00329 1044 aa6.85□□□□□ -1.31
LINC00648-201ENST00000553747 EML1O00423 815 aa6.85□□□□□ -1.31
LINC00648-201ENST00000553747 NOS2P35228 1153 aa6.85□□□□□ -1.31
LINC00648-201ENST00000553747 LCE1DQ5T752 114 aa6.85□□□□□ -1.31
LINC00648-201ENST00000553747 C7orf43Q8WVR3 580 aa6.85□□□□□ -1.31
LINC00648-201ENST00000553747 SCHIP1Q9P0W5 487 aaPredicted RBP6.85□□□□□ -1.31
LINC00648-201ENST00000553747 NRG1Q02297 640 aaPredicted RBP6.84□□□□□ -1.31
LINC00648-201ENST00000553747 NUDT8Q8WV74 236 aa6.84□□□□□ -1.31
LINC00648-201ENST00000553747 CLUAP1Q96AJ1 413 aa6.84□□□□□ -1.31
LINC00648-201ENST00000553747 HSH2DQ96JZ2 352 aa6.84□□□□□ -1.31
LINC00648-201ENST00000553747 ALG2Q9H553 416 aa6.84□□□□□ -1.31
LINC00648-201ENST00000553747 IGFLR1Q9H665 355 aa6.84□□□□□ -1.31
LINC00648-201ENST00000553747 GOLGA2P5Q9HBQ8 144 aa6.84□□□□□ -1.31
LINC00648-201ENST00000553747 ZNF358Q9NW07 568 aa6.84□□□□□ -1.31
LINC00648-201ENST00000553747 LILRB5O75023 590 aa6.83□□□□□ -1.32
LINC00648-201ENST00000553747 TEAD4Q15561 434 aa6.83□□□□□ -1.32
LINC00648-201ENST00000553747 SLC9A9Q8IVB4 645 aa6.83□□□□□ -1.32
LINC00648-201ENST00000553747 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
LINC00648-201ENST00000553747 RHPN1Q8TCX5 695 aa6.83□□□□□ -1.32
LINC00648-201ENST00000553747 BHMTQ93088 406 aa6.83□□□□□ -1.32
LINC00648-201ENST00000553747 CEP63Q96MT8 703 aa6.83□□□□□ -1.32
LINC00648-201ENST00000553747 POM121CA8CG34 1229 aa6.82□□□□□ -1.32
LINC00648-201ENST00000553747 BACH1O14867 736 aa6.82□□□□□ -1.32
LINC00648-201ENST00000553747 SKIP12755 728 aa6.82□□□□□ -1.32
LINC00648-201ENST00000553747 ELNP15502 786 aa6.82□□□□□ -1.32
LINC00648-201ENST00000553747 PSME1Q06323 249 aa6.82□□□□□ -1.32
LINC00648-201ENST00000553747 PROSER2Q86WR7 435 aaPredicted RBP6.82□□□□□ -1.32
LINC00648-201ENST00000553747 LENG1Q96BZ8 264 aaPredicted RBP6.82□□□□□ -1.32
LINC00648-201ENST00000553747 JPH1Q9HDC5 661 aaPredicted RBP6.82□□□□□ -1.32
LINC00648-201ENST00000553747 BRD7Q9NPI1 651 aa6.82□□□□□ -1.32
LINC00648-201ENST00000553747 USP21Q9UK80 565 aa6.82□□□□□ -1.32
LINC00648-201ENST00000553747 SFI1A8K8P3 1242 aa6.81□□□□□ -1.32
LINC00648-201ENST00000553747 NEUROD1Q13562 356 aa6.81□□□□□ -1.32
LINC00648-201ENST00000553747 HDGFL1Q5TGJ6 251 aa6.81□□□□□ -1.32
LINC00648-201ENST00000553747 DMRTC2Q8IXT2 367 aaPredicted RBP6.81□□□□□ -1.32
LINC00648-201ENST00000553747 NFATC2IPQ8NCF5 419 aa6.81□□□□□ -1.32
LINC00648-201ENST00000553747 UBE2OQ9C0C9 1292 aaKnown RBP6.81□□□□□ -1.32
LINC00648-201ENST00000553747 EPHA4P54764 986 aa6.8□□□□□ -1.32
LINC00648-201ENST00000553747 RAC1P63000 192 aa6.8□□□□□ -1.32
LINC00648-201ENST00000553747 GTF2IP78347 998 aa6.8□□□□□ -1.32
LINC00648-201ENST00000553747 EML3Q32P44 896 aa6.8□□□□□ -1.32
LINC00648-201ENST00000553747 ZNF280CQ8ND82 737 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms