RNA–Protein interactions for RNA: ENST00000553746.1

ATL1-204, Transcript of atlastin GTPase 1, humanhuman

TSL 2

Gene ATL1, Length 370 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-204ENST00000553746 ELOA3BQ3SY89 546 aa9.37□□□□□ -0.91
ATL1-204ENST00000553746 C1orf53Q5VUE5 145 aa9.37□□□□□ -0.91
ATL1-204ENST00000553746 LRRC69Q6ZNQ3 347 aa9.37□□□□□ -0.91
ATL1-204ENST00000553746 CD163Q86VB7 1156 aa9.37□□□□□ -0.91
ATL1-204ENST00000553746 ELOA3Q8NG57 546 aa9.37□□□□□ -0.91
ATL1-204ENST00000553746 NEUROD4Q9HD90 331 aa9.37□□□□□ -0.91
ATL1-204ENST00000553746 ZNF232Q9UNY5 417 aa9.37□□□□□ -0.91
ATL1-204ENST00000553746 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
ATL1-204ENST00000553746 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
ATL1-204ENST00000553746 POM121CA8CG34 1229 aa9.36□□□□□ -0.91
ATL1-204ENST00000553746 SIN3BO75182 1162 aa9.36□□□□□ -0.91
ATL1-204ENST00000553746 UBTFP17480 764 aaKnown RBP9.36□□□□□ -0.91
ATL1-204ENST00000553746 HIRAP54198 1017 aaPredicted RBP9.36□□□□□ -0.91
ATL1-204ENST00000553746 HDGFL1Q5TGJ6 251 aa9.36□□□□□ -0.91
ATL1-204ENST00000553746 CCDC102BQ68D86 513 aa9.36□□□□□ -0.91
ATL1-204ENST00000553746 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
ATL1-204ENST00000553746 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
ATL1-204ENST00000553746 LARGE2Q8N3Y3 721 aa9.36□□□□□ -0.91
ATL1-204ENST00000553746 TPCN2Q8NHX9 752 aa9.36□□□□□ -0.91
ATL1-204ENST00000553746 ADARB2-AS1A8MUL3 147 aa9.35□□□□□ -0.91
ATL1-204ENST00000553746 ATP9BO43861 1147 aa9.35□□□□□ -0.91
ATL1-204ENST00000553746 ALAS2P22557 587 aa9.35□□□□□ -0.91
ATL1-204ENST00000553746 PSMA6P60900 246 aaKnown RBP9.35□□□□□ -0.91
ATL1-204ENST00000553746 CLDN10P78369 228 aa9.35□□□□□ -0.91
ATL1-204ENST00000553746 TBCELQ5QJ74 424 aa9.35□□□□□ -0.91
ATL1-204ENST00000553746 SYT9Q86SS6 491 aa9.35□□□□□ -0.91
ATL1-204ENST00000553746 UCN2Q96RP3 112 aa9.35□□□□□ -0.91
ATL1-204ENST00000553746 KIAA1024Q9UPX6 916 aa9.35□□□□□ -0.91
ATL1-204ENST00000553746 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
ATL1-204ENST00000553746 TRIM11Q96F44 468 aa9.34□□□□□ -0.91
ATL1-204ENST00000553746 RHPN1Q8TCX5 695 aa9.33□□□□□ -0.92
ATL1-204ENST00000553746 PLVAPQ9BX97 442 aa9.33□□□□□ -0.92
ATL1-204ENST00000553746 ANKIB1Q9P2G1 1089 aa9.33□□□□□ -0.92
ATL1-204ENST00000553746 FURINP09958 794 aa9.32□□□□□ -0.92
ATL1-204ENST00000553746 CHRNA4P43681 627 aa9.32□□□□□ -0.92
ATL1-204ENST00000553746 SFSWAPQ12872 951 aaKnown RBP9.32□□□□□ -0.92
ATL1-204ENST00000553746 SH3PXD2AQ5TCZ1 1133 aa9.32□□□□□ -0.92
ATL1-204ENST00000553746 SIX5Q8N196 739 aa9.32□□□□□ -0.92
ATL1-204ENST00000553746 OGFOD1Q8N543 542 aa9.32□□□□□ -0.92
ATL1-204ENST00000553746 TSPAN10Q9H1Z9 355 aaPredicted RBP9.32□□□□□ -0.92
ATL1-204ENST00000553746 MKRN1Q9UHC7 482 aaKnown RBP9.32□□□□□ -0.92
ATL1-204ENST00000553746 CHMP3Q9Y3E7 222 aa9.32□□□□□ -0.92
ATL1-204ENST00000553746 KCNQ4P56696 695 aa9.31□□□□□ -0.92
ATL1-204ENST00000553746 TNFRSF25Q93038 417 aa9.31□□□□□ -0.92
ATL1-204ENST00000553746 PRDM6Q9NQX0 595 aa9.31□□□□□ -0.92
ATL1-204ENST00000553746 SPDYE3A6NKU9 549 aa9.3□□□□□ -0.92
ATL1-204ENST00000553746 DKK1O94907 266 aa9.3□□□□□ -0.92
ATL1-204ENST00000553746 SPATA31C1P0DKV0 1188 aa9.3□□□□□ -0.92
ATL1-204ENST00000553746 SLC30A3Q99726 388 aa9.3□□□□□ -0.92
ATL1-204ENST00000553746 NEUROD1Q13562 356 aa9.29□□□□□ -0.92
ATL1-204ENST00000553746 STAG2Q8N3U4 1231 aa9.29□□□□□ -0.92
ATL1-204ENST00000553746 HCN4Q9Y3Q4 1203 aa9.29□□□□□ -0.92
ATL1-204ENST00000553746 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
ATL1-204ENST00000553746 PHACTR1Q9C0D0 580 aa9.28□□□□□ -0.92
ATL1-204ENST00000553746 COL9A3Q14050 684 aaPredicted RBP9.27□□□□□ -0.93
ATL1-204ENST00000553746 XP32Q5T750 250 aa9.27□□□□□ -0.93
ATL1-204ENST00000553746 GAS2L2Q8NHY3 880 aa9.27□□□□□ -0.93
ATL1-204ENST00000553746 SUSD3Q96L08 255 aa9.27□□□□□ -0.93
ATL1-204ENST00000553746 CEP63Q96MT8 703 aa9.27□□□□□ -0.93
ATL1-204ENST00000553746 BRD7Q9NPI1 651 aa9.27□□□□□ -0.93
ATL1-204ENST00000553746 STARD13Q9Y3M8 1113 aa9.27□□□□□ -0.93
ATL1-204ENST00000553746 RBM19Q9Y4C8 960 aaKnown RBP9.27□□□□□ -0.93
ATL1-204ENST00000553746 SFI1A8K8P3 1242 aa9.26□□□□□ -0.93
ATL1-204ENST00000553746 C21orf2O43822 256 aa9.26□□□□□ -0.93
ATL1-204ENST00000553746 TSEN2Q8NCE0 465 aaKnown RBP9.26□□□□□ -0.93
ATL1-204ENST00000553746 KCNH4Q9UQ05 1017 aa9.26□□□□□ -0.93
ATL1-204ENST00000553746 PPP1R12BO60237 982 aaPredicted RBP9.25□□□□□ -0.93
ATL1-204ENST00000553746 TYRO3Q06418 890 aa9.25□□□□□ -0.93
ATL1-204ENST00000553746 PRRT3Q5FWE3 981 aa9.25□□□□□ -0.93
ATL1-204ENST00000553746 MICALL1Q8N3F8 863 aa9.25□□□□□ -0.93
ATL1-204ENST00000553746 FNBP4Q8N3X1 1017 aaPredicted RBP9.25□□□□□ -0.93
ATL1-204ENST00000553746 ZNF280CQ8ND82 737 aa9.25□□□□□ -0.93
ATL1-204ENST00000553746 HSH2DQ96JZ2 352 aa9.25□□□□□ -0.93
ATL1-204ENST00000553746 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
ATL1-204ENST00000553746 M0R082 166 aa9.24□□□□□ -0.93
ATL1-204ENST00000553746 GATA4P43694 442 aa9.24□□□□□ -0.93
ATL1-204ENST00000553746 HIF1AQ16665 826 aa9.24□□□□□ -0.93
ATL1-204ENST00000553746 ZNF417Q8TAU3 575 aa9.24□□□□□ -0.93
ATL1-204ENST00000553746 ZNF594Q96JF6 807 aaPredicted RBP9.24□□□□□ -0.93
ATL1-204ENST00000553746 ZNF587Q96SQ5 575 aaPredicted RBP9.24□□□□□ -0.93
ATL1-204ENST00000553746 C2orf49Q9BVC5 232 aaPredicted RBP9.24□□□□□ -0.93
ATL1-204ENST00000553746 ADH7P40394 386 aa9.23□□□□□ -0.93
ATL1-204ENST00000553746 ALDH16A1Q8IZ83 802 aa9.23□□□□□ -0.93
ATL1-204ENST00000553746 EFCC1Q9HA90 598 aa9.23□□□□□ -0.93
ATL1-204ENST00000553746 TFIP11Q9UBB9 837 aaKnown RBP9.23□□□□□ -0.93
ATL1-204ENST00000553746 RASA1P20936 1047 aa9.22□□□□□ -0.93
ATL1-204ENST00000553746 SEC13P55735 322 aa9.22□□□□□ -0.93
ATL1-204ENST00000553746 DOC2BQ14184 412 aa9.22□□□□□ -0.93
ATL1-204ENST00000553746 C20orf204Q6ZNR8 217 aa9.22□□□□□ -0.93
ATL1-204ENST00000553746 MAFBQ9Y5Q3 323 aaPredicted RBP9.22□□□□□ -0.93
ATL1-204ENST00000553746 ALBP02768 609 aa9.21□□□□□ -0.94
ATL1-204ENST00000553746 BTLAQ7Z6A9 289 aa9.21□□□□□ -0.94
ATL1-204ENST00000553746 GLMNQ92990 594 aa9.21□□□□□ -0.94
ATL1-204ENST00000553746 APBA3O96018 575 aa9.2□□□□□ -0.94
ATL1-204ENST00000553746 NID1P14543 1247 aa9.2□□□□□ -0.94
ATL1-204ENST00000553746 TRIM28Q13263 835 aaKnown RBP9.2□□□□□ -0.94
ATL1-204ENST00000553746 PROSER2Q86WR7 435 aaPredicted RBP9.2□□□□□ -0.94
ATL1-204ENST00000553746 SCG3Q8WXD2 468 aaKnown RBP9.2□□□□□ -0.94
ATL1-204ENST00000553746 ITGB7P26010 798 aa9.19□□□□□ -0.94
ATL1-204ENST00000553746 IER5Q5VY09 327 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms