RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 A0A087WZG4 1122 aa17.89■□□□□ 0.46
ARHGEF40-202ENST00000553709 CTAGE5O15320 804 aa17.89■□□□□ 0.46
ARHGEF40-202ENST00000553709 EIF3JO75822 258 aaKnown RBP17.89■□□□□ 0.46
ARHGEF40-202ENST00000553709 PIP4K2BP78356 416 aa17.89■□□□□ 0.46
ARHGEF40-202ENST00000553709 KLHL40Q2TBA0 621 aa17.89■□□□□ 0.46
ARHGEF40-202ENST00000553709 CARD14Q9BXL6 1004 aa17.89■□□□□ 0.46
ARHGEF40-202ENST00000553709 NAPBQ9H115 298 aa17.89■□□□□ 0.46
ARHGEF40-202ENST00000553709 GDPD2Q9HCC8 539 aa17.89■□□□□ 0.46
ARHGEF40-202ENST00000553709 EPB41L2O43491 1005 aaKnown RBP17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 LARP6Q9BRS8 491 aaKnown RBP17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 DDX19AQ9NUU7 478 aaKnown RBP17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 TET3O43151 1660 aa17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 GJB2P29033 226 aa17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 SKIDA1Q1XH10 827 aa17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 CCDC196A0A1B0GTZ2 297 aa17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 FOXO3O43524 673 aa17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 PTPN14Q15678 1187 aa17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 PDCL2Q8N4E4 241 aa17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 PIBF1Q8WXW3 757 aa17.89■□□□□ 0.45
ARHGEF40-202ENST00000553709 TSHZ3Q63HK5 1081 aa17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 PIK3C2GO75747 1445 aa17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 UNC13BO14795 1591 aa17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 GUCY1B3Q02153 619 aa17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 ARHGAP29Q52LW3 1261 aa17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 CKAP2LQ8IYA6 745 aa17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 UBXN4Q92575 508 aa17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 POLR3AO14802 1390 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 NPC1L1Q9UHC9 1359 aa17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 PI4KAP2A4QPH2 592 aa17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 SSBP05455 408 aaKnown RBP eCLIP17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 PI4KAP1Q8N8J0 262 aa17.88■□□□□ 0.45
ARHGEF40-202ENST00000553709 PLA2R1Q13018 1463 aa17.87■□□□□ 0.45
ARHGEF40-202ENST00000553709 ZNF213O14771 459 aa17.87■□□□□ 0.45
ARHGEF40-202ENST00000553709 ERLIN2O94905 339 aa17.87■□□□□ 0.45
ARHGEF40-202ENST00000553709 SDSP20132 328 aa17.87■□□□□ 0.45
ARHGEF40-202ENST00000553709 FBLN1P23142 703 aa17.87■□□□□ 0.45
ARHGEF40-202ENST00000553709 EIF5P55010 431 aaKnown RBP17.87■□□□□ 0.45
ARHGEF40-202ENST00000553709 C8orf34Q49A92 452 aa17.87■□□□□ 0.45
ARHGEF40-202ENST00000553709 BICDL1Q6ZP65 573 aa17.87■□□□□ 0.45
ARHGEF40-202ENST00000553709 CLIP2Q9UDT6 1046 aa17.87■□□□□ 0.45
ARHGEF40-202ENST00000553709 MAP3K12Q12852 859 aa17.86■□□□□ 0.45
ARHGEF40-202ENST00000553709 MEIS3Q99687 375 aa17.86■□□□□ 0.45
ARHGEF40-202ENST00000553709 TBX22Q9Y458 520 aa17.86■□□□□ 0.45
ARHGEF40-202ENST00000553709 MYOM2P54296 1465 aa17.86■□□□□ 0.45
ARHGEF40-202ENST00000553709 GOLGA6L10A6NI86 522 aa17.86■□□□□ 0.45
ARHGEF40-202ENST00000553709 MINDY4BA8MYZ0 360 aa17.86■□□□□ 0.45
ARHGEF40-202ENST00000553709 IQCEQ6IPM2 695 aa17.86■□□□□ 0.45
ARHGEF40-202ENST00000553709 KDM5CP41229 1560 aa17.86■□□□□ 0.45
ARHGEF40-202ENST00000553709 TSPOAP1O95153 1857 aa17.86■□□□□ 0.45
ARHGEF40-202ENST00000553709 TTC21AQ8NDW8 1320 aa17.86■□□□□ 0.45
ARHGEF40-202ENST00000553709 ZSCAN12O43309 604 aa17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 GOLGA8BA8MQT2 603 aa17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 HMGB2P26583 209 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 HSP90AB3PQ58FF7 597 aa17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 ANKRD44Q8N8A2 993 aa17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 RHPN1Q8TCX5 695 aa17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 ZNF652Q9Y2D9 606 aa17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 CCT2P78371 535 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 CAVIN4Q5BKX8 364 aa17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 TMX3Q96JJ7 454 aa17.85■□□□□ 0.45
ARHGEF40-202ENST00000553709 A0A1W2PP64 1363 aa17.84■□□□□ 0.45
ARHGEF40-202ENST00000553709 TSPYL1Q9H0U9 437 aa17.84■□□□□ 0.45
ARHGEF40-202ENST00000553709 TFIP11Q9UBB9 837 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-202ENST00000553709 SLC12A7Q9Y666 1083 aa17.84■□□□□ 0.45
ARHGEF40-202ENST00000553709 FSIP1Q8NA03 581 aa17.84■□□□□ 0.45
ARHGEF40-202ENST00000553709 KIF18AQ8NI77 898 aa17.84■□□□□ 0.45
ARHGEF40-202ENST00000553709 HMG20BQ9P0W2 317 aa17.84■□□□□ 0.45
ARHGEF40-202ENST00000553709 UBE2HP62256 183 aa17.84■□□□□ 0.45
ARHGEF40-202ENST00000553709 UGGT1Q9NYU2 1555 aa17.83■□□□□ 0.45
ARHGEF40-202ENST00000553709 KIAA1328Q86T90 577 aa17.83■□□□□ 0.45
ARHGEF40-202ENST00000553709 RBM27Q9P2N5 1060 aaKnown RBP17.83■□□□□ 0.45
ARHGEF40-202ENST00000553709 GOLIM4O00461 696 aa17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 PDE1AP54750 535 aa17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 TMEM132AQ24JP5 1023 aa17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 KIF1BO60333 1816 aa17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 MCM5P33992 734 aa17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 RBM5P52756 815 aaKnown RBP eCLIP17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 PDCL3Q9H2J4 239 aa17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 ZNF287Q9HBT7 754 aa17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 PRDM15P57071 1507 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 TOP1P11387 765 aaKnown RBP17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 PHAXQ9H814 394 aaKnown RBP17.83■□□□□ 0.44
ARHGEF40-202ENST00000553709 ANKRD18BA2A2Z9 1011 aa17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 SLC5A1P13866 664 aa17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 ZSCAN23Q3MJ62 389 aa17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 CTCFLQ8NI51 663 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 NEK1Q96PY6 1258 aa17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 C8orf58Q8NAV2 365 aa17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 GOLGA8AA7E2F4 631 aa17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 ADCY5O95622 1261 aa17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 KLHL10Q6JEL2 608 aa17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 RNF41Q9H4P4 317 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 ZBTB3Q9H5J0 574 aa17.82■□□□□ 0.44
ARHGEF40-202ENST00000553709 ABCC3O15438 1527 aa17.81■□□□□ 0.44
ARHGEF40-202ENST00000553709 EFCAB6Q5THR3 1501 aa17.81■□□□□ 0.44
ARHGEF40-202ENST00000553709 TMEM2Q9UHN6 1383 aa17.81■□□□□ 0.44
ARHGEF40-202ENST00000553709 SBNO2Q9Y2G9 1366 aa17.81■□□□□ 0.44
ARHGEF40-202ENST00000553709 NEMFO60524 1076 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms