RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 PRPF40BQ6NWY9 871 aaKnown RBP19.15■□□□□ 0.66
NEDD1-205ENST00000553609 U2SURPO15042 1029 aaKnown RBP19.14■□□□□ 0.65
NEDD1-205ENST00000553609 DDNO94850 711 aaPredicted RBP19.14■□□□□ 0.65
NEDD1-205ENST00000553609 C7orf43Q8WVR3 580 aa19.14■□□□□ 0.65
NEDD1-205ENST00000553609 PHACTR3Q96KR7 559 aa19.14■□□□□ 0.65
NEDD1-205ENST00000553609 SETDB2Q96T68 719 aa19.14■□□□□ 0.65
NEDD1-205ENST00000553609 CHADLQ6NUI6 762 aa19.13■□□□□ 0.65
NEDD1-205ENST00000553609 CNKSR1Q969H4 720 aa19.13■□□□□ 0.65
NEDD1-205ENST00000553609 CREBZFQ9NS37 354 aa19.13■□□□□ 0.65
NEDD1-205ENST00000553609 DZIP3Q86Y13 1208 aaKnown RBP19.12■□□□□ 0.65
NEDD1-205ENST00000553609 MASTLQ96GX5 879 aa19.12■□□□□ 0.65
NEDD1-205ENST00000553609 USP16Q9Y5T5 823 aa19.12■□□□□ 0.65
NEDD1-205ENST00000553609 CACNA1SQ13698 1873 aa19.11■□□□□ 0.65
NEDD1-205ENST00000553609 PRAMEF22A3QJZ6 481 aa19.11■□□□□ 0.65
NEDD1-205ENST00000553609 PIP4K2AP48426 406 aaPredicted RBP19.11■□□□□ 0.65
NEDD1-205ENST00000553609 ST5P78524 1137 aa19.11■□□□□ 0.65
NEDD1-205ENST00000553609 CCER1Q8TC90 406 aaPredicted RBP19.11■□□□□ 0.65
NEDD1-205ENST00000553609 RSPH6AQ9H0K4 717 aa19.11■□□□□ 0.65
NEDD1-205ENST00000553609 KLRG2A4D1S0 409 aaPredicted RBP19.1■□□□□ 0.65
NEDD1-205ENST00000553609 BTBD11A6QL63 1104 aa19.1■□□□□ 0.65
NEDD1-205ENST00000553609 L3MBTL3Q96JM7 780 aaPredicted RBP19.1■□□□□ 0.65
NEDD1-205ENST00000553609 PASKQ96RG2 1323 aa19.09■□□□□ 0.65
NEDD1-205ENST00000553609 PRKAR2BP31323 418 aa19.09■□□□□ 0.65
NEDD1-205ENST00000553609 SOGA3Q5TF21 947 aa19.09■□□□□ 0.65
NEDD1-205ENST00000553609 MKRN1Q9UHC7 482 aaKnown RBP19.09■□□□□ 0.65
NEDD1-205ENST00000553609 CLEC4GQ6UXB4 293 aa19.08■□□□□ 0.64
NEDD1-205ENST00000553609 CNTNAP1P78357 1384 aa19.07■□□□□ 0.64
NEDD1-205ENST00000553609 NBPF5PQ86XG9 351 aaPredicted RBP19.07■□□□□ 0.64
NEDD1-205ENST00000553609 TAF1DQ9H5J8 278 aaPredicted RBP19.07■□□□□ 0.64
NEDD1-205ENST00000553609 ADAMTSL1Q8N6G6 1762 aa19.06■□□□□ 0.64
NEDD1-205ENST00000553609 NBPF26B4DH59 902 aa19.06■□□□□ 0.64
NEDD1-205ENST00000553609 NPHP1O15259 732 aa19.06■□□□□ 0.64
NEDD1-205ENST00000553609 CCDC93Q567U6 631 aa19.06■□□□□ 0.64
NEDD1-205ENST00000553609 NBPF10Q6P3W6 841 aaKnown RBP19.06■□□□□ 0.64
NEDD1-205ENST00000553609 OLFM4Q6UX06 510 aa19.06■□□□□ 0.64
NEDD1-205ENST00000553609 NPM2Q86SE8 214 aaKnown RBP19.06■□□□□ 0.64
NEDD1-205ENST00000553609 LDHDQ86WU2 507 aa19.06■□□□□ 0.64
NEDD1-205ENST00000553609 NBPF15Q8N660 670 aa19.06■□□□□ 0.64
NEDD1-205ENST00000553609 SCN4AP35499 1836 aa19.06■□□□□ 0.64
NEDD1-205ENST00000553609 SNED1Q8TER0 1413 aa19.06■□□□□ 0.64
NEDD1-205ENST00000553609 ZNF541Q9H0D2 1346 aa19.05■□□□□ 0.64
NEDD1-205ENST00000553609 IQCA1LA6NCM1 817 aa19.05■□□□□ 0.64
NEDD1-205ENST00000553609 RGL2O15211 777 aa19.05■□□□□ 0.64
NEDD1-205ENST00000553609 NPR1P16066 1061 aa19.05■□□□□ 0.64
NEDD1-205ENST00000553609 CNGB1Q14028 1251 aaPredicted RBP19.05■□□□□ 0.64
NEDD1-205ENST00000553609 ITGBL1O95965 494 aaPredicted RBP19.04■□□□□ 0.64
NEDD1-205ENST00000553609 SNRPA1P09661 255 aaKnown RBP19.04■□□□□ 0.64
NEDD1-205ENST00000553609 FKBP4Q02790 459 aaKnown RBP eCLIP19.04■□□□□ 0.64
NEDD1-205ENST00000553609 FOXN1O15353 648 aa19.03■□□□□ 0.64
NEDD1-205ENST00000553609 MCM10Q7L590 875 aa19.03■□□□□ 0.64
NEDD1-205ENST00000553609 ZNF277Q9NRM2 450 aaPredicted RBP19.03■□□□□ 0.64
NEDD1-205ENST00000553609 ZNF652Q9Y2D9 606 aa19.03■□□□□ 0.64
NEDD1-205ENST00000553609 NIP7Q9Y221 180 aaKnown RBP eCLIP19.01■□□□□ 0.63
NEDD1-205ENST00000553609 DCTN1Q14203 1278 aa19■□□□□ 0.63
NEDD1-205ENST00000553609 HLFQ16534 295 aa19■□□□□ 0.63
NEDD1-205ENST00000553609 TPTE2Q6XPS3 522 aa19■□□□□ 0.63
NEDD1-205ENST00000553609 ABCC12Q96J65 1359 aa19■□□□□ 0.63
NEDD1-205ENST00000553609 COL4A5P29400 1685 aa18.99■□□□□ 0.63
NEDD1-205ENST00000553609 FZD9O00144 591 aa18.99■□□□□ 0.63
NEDD1-205ENST00000553609 VEGFBP49765 207 aa18.99■□□□□ 0.63
NEDD1-205ENST00000553609 RTKN2Q8IZC4 609 aa18.99■□□□□ 0.63
NEDD1-205ENST00000553609 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
NEDD1-205ENST00000553609 HACL1Q9UJ83 578 aa18.99■□□□□ 0.63
NEDD1-205ENST00000553609 TMEM88BA6NKF7 163 aa18.98■□□□□ 0.63
NEDD1-205ENST00000553609 EPHX2P34913 555 aa18.98■□□□□ 0.63
NEDD1-205ENST00000553609 CRY2Q49AN0 593 aa18.98■□□□□ 0.63
NEDD1-205ENST00000553609 PRDM10Q9NQV6 1147 aa18.98■□□□□ 0.63
NEDD1-205ENST00000553609 LAMB4A4D0S4 1761 aa18.98■□□□□ 0.63
NEDD1-205ENST00000553609 RNF123Q5XPI4 1314 aa18.98■□□□□ 0.63
NEDD1-205ENST00000553609 FAM177BA6PVY3 158 aa18.97■□□□□ 0.63
NEDD1-205ENST00000553609 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
NEDD1-205ENST00000553609 U2AF1L5P0DN76 240 aaPredicted RBP18.97■□□□□ 0.63
NEDD1-205ENST00000553609 IARSP41252 1262 aaKnown RBP18.97■□□□□ 0.63
NEDD1-205ENST00000553609 U2AF1Q01081 240 aaKnown RBP eCLIP18.97■□□□□ 0.63
NEDD1-205ENST00000553609 EAPPQ56P03 285 aaPredicted RBP18.97■□□□□ 0.63
NEDD1-205ENST00000553609 RTF1Q92541 710 aaKnown RBP18.97■□□□□ 0.63
NEDD1-205ENST00000553609 PPP2R1AP30153 589 aa18.96■□□□□ 0.63
NEDD1-205ENST00000553609 SYNE4Q8N205 404 aa18.96■□□□□ 0.63
NEDD1-205ENST00000553609 PSMD1Q99460 953 aa18.96■□□□□ 0.63
NEDD1-205ENST00000553609 NUDCQ9Y266 331 aa18.96■□□□□ 0.63
NEDD1-205ENST00000553609 LTBP1Q14766 1721 aa18.96■□□□□ 0.63
NEDD1-205ENST00000553609 RASSF10A6NK89 507 aa18.95■□□□□ 0.62
NEDD1-205ENST00000553609 ALDH1B1P30837 517 aa18.95■□□□□ 0.62
NEDD1-205ENST00000553609 WBP1LQ9NX94 342 aa18.95■□□□□ 0.62
NEDD1-205ENST00000553609 RIC1Q4ADV7 1423 aa18.94■□□□□ 0.62
NEDD1-205ENST00000553609 MAP1SQ66K74 1059 aaPredicted RBP18.94■□□□□ 0.62
NEDD1-205ENST00000553609 SLC51AQ86UW1 340 aa18.94■□□□□ 0.62
NEDD1-205ENST00000553609 GPC2Q8N158 579 aa18.94■□□□□ 0.62
NEDD1-205ENST00000553609 KDM3BQ7LBC6 1761 aa18.93■□□□□ 0.62
NEDD1-205ENST00000553609 CTCFP49711 727 aaPredicted RBP18.93■□□□□ 0.62
NEDD1-205ENST00000553609 TAF7Q15545 349 aaPredicted RBP18.93■□□□□ 0.62
NEDD1-205ENST00000553609 PNMA8AQ86V59 439 aaPredicted RBP18.93■□□□□ 0.62
NEDD1-205ENST00000553609 NUTM1Q86Y26 1132 aa18.93■□□□□ 0.62
NEDD1-205ENST00000553609 CNTROBQ8N137 903 aa18.93■□□□□ 0.62
NEDD1-205ENST00000553609 MIS18AQ9NYP9 233 aa18.93■□□□□ 0.62
NEDD1-205ENST00000553609 HOXA10P31260 410 aaPredicted RBP18.92■□□□□ 0.62
NEDD1-205ENST00000553609 CLEC11AQ9Y240 323 aa18.92■□□□□ 0.62
NEDD1-205ENST00000553609 UBN2Q6ZU65 1347 aa18.92■□□□□ 0.62
NEDD1-205ENST00000553609 IBTKQ9P2D0 1353 aaPredicted RBP18.92■□□□□ 0.62
NEDD1-205ENST00000553609 ERVV-1B6SEH8 477 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms