RNA–Protein interactions for RNA: ENST00000553509.1

ATL1-203, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-203ENST00000553509 CHPF2Q9P2E5 772 aa17.16■□□□□ 0.34
ATL1-203ENST00000553509 KIF13BQ9NQT8 1826 aa17.16■□□□□ 0.34
ATL1-203ENST00000553509 ERVV-1B6SEH8 477 aa17.15■□□□□ 0.34
ATL1-203ENST00000553509 EXOSC9Q06265 439 aaKnown RBP17.15■□□□□ 0.34
ATL1-203ENST00000553509 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
ATL1-203ENST00000553509 NRXN2Q9P2S2 1712 aa17.15■□□□□ 0.34
ATL1-203ENST00000553509 MAP3K15Q6ZN16 1313 aa17.15■□□□□ 0.34
ATL1-203ENST00000553509 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
ATL1-203ENST00000553509 TSPYL6Q8N831 410 aa17.14■□□□□ 0.33
ATL1-203ENST00000553509 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.33
ATL1-203ENST00000553509 TM4SF1P30408 202 aa17.13■□□□□ 0.33
ATL1-203ENST00000553509 PROSER3Q2NL68 480 aa17.13■□□□□ 0.33
ATL1-203ENST00000553509 LRP10Q7Z4F1 713 aa17.13■□□□□ 0.33
ATL1-203ENST00000553509 CARMIL3Q8ND23 1372 aa17.13■□□□□ 0.33
ATL1-203ENST00000553509 ARFGEF2Q9Y6D5 1785 aa17.12■□□□□ 0.33
ATL1-203ENST00000553509 ANXA1P04083 346 aa17.12■□□□□ 0.33
ATL1-203ENST00000553509 NFIXQ14938 502 aa17.12■□□□□ 0.33
ATL1-203ENST00000553509 TTLL7Q6ZT98 887 aa17.12■□□□□ 0.33
ATL1-203ENST00000553509 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
ATL1-203ENST00000553509 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
ATL1-203ENST00000553509 ATP10DQ9P241 1426 aa17.12■□□□□ 0.33
ATL1-203ENST00000553509 POLRMTO00411 1230 aaKnown RBP17.11■□□□□ 0.33
ATL1-203ENST00000553509 HSP90AB3PQ58FF7 597 aa17.11■□□□□ 0.33
ATL1-203ENST00000553509 TBC1D9BQ66K14 1250 aa17.11■□□□□ 0.33
ATL1-203ENST00000553509 COPS6Q7L5N1 327 aa17.11■□□□□ 0.33
ATL1-203ENST00000553509 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
ATL1-203ENST00000553509 XAGE3Q8WTP9 111 aa17.11■□□□□ 0.33
ATL1-203ENST00000553509 FHDC1Q9C0D6 1143 aaPredicted RBP17.11■□□□□ 0.33
ATL1-203ENST00000553509 CD2APQ9Y5K6 639 aa17.11■□□□□ 0.33
ATL1-203ENST00000553509 VAMP4O75379 141 aa17.1■□□□□ 0.33
ATL1-203ENST00000553509 DDX58O95786 925 aaKnown RBP17.1■□□□□ 0.33
ATL1-203ENST00000553509 DDR1Q08345 913 aa17.1■□□□□ 0.33
ATL1-203ENST00000553509 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
ATL1-203ENST00000553509 GIGYF2Q6Y7W6 1299 aaKnown RBP17.1■□□□□ 0.33
ATL1-203ENST00000553509 BICDL1Q6ZP65 573 aa17.1■□□□□ 0.33
ATL1-203ENST00000553509 ZNF428Q96B54 188 aa17.1■□□□□ 0.33
ATL1-203ENST00000553509 ZBTB3Q9H5J0 574 aa17.1■□□□□ 0.33
ATL1-203ENST00000553509 C10orf71Q711Q0 1435 aa17.1■□□□□ 0.33
ATL1-203ENST00000553509 CT47B1P0C2W7 299 aaPredicted RBP17.09■□□□□ 0.33
ATL1-203ENST00000553509 PLBD2Q8NHP8 589 aa17.09■□□□□ 0.33
ATL1-203ENST00000553509 NPHP1O15259 732 aa17.08■□□□□ 0.32
ATL1-203ENST00000553509 SERPINB2P05120 415 aa17.08■□□□□ 0.32
ATL1-203ENST00000553509 ANKRD13DQ6ZTN6 518 aa17.08■□□□□ 0.32
ATL1-203ENST00000553509 TRMT2AQ8IZ69 625 aaKnown RBP17.08■□□□□ 0.32
ATL1-203ENST00000553509 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.32
ATL1-203ENST00000553509 SYT17Q9BSW7 474 aa17.08■□□□□ 0.32
ATL1-203ENST00000553509 NIP7Q9Y221 180 aaKnown RBP eCLIP17.08■□□□□ 0.32
ATL1-203ENST00000553509 HLFQ16534 295 aa17.07■□□□□ 0.32
ATL1-203ENST00000553509 IBTKQ9P2D0 1353 aaPredicted RBP17.06■□□□□ 0.32
ATL1-203ENST00000553509 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
ATL1-203ENST00000553509 PARP10Q53GL7 1025 aa17.06■□□□□ 0.32
ATL1-203ENST00000553509 NBPF5PQ86XG9 351 aaPredicted RBP17.06■□□□□ 0.32
ATL1-203ENST00000553509 CNBD1Q8NA66 436 aa17.06■□□□□ 0.32
ATL1-203ENST00000553509 NYXQ9GZU5 481 aa17.06■□□□□ 0.32
ATL1-203ENST00000553509 N4BP2Q86UW6 1770 aaPredicted RBP17.05■□□□□ 0.32
ATL1-203ENST00000553509 DLEC1Q9Y238 1755 aa17.05■□□□□ 0.32
ATL1-203ENST00000553509 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
ATL1-203ENST00000553509 ST5P78524 1137 aa17.05■□□□□ 0.32
ATL1-203ENST00000553509 TPTE2Q6XPS3 522 aa17.05■□□□□ 0.32
ATL1-203ENST00000553509 RIC3Q7Z5B4 369 aa17.05■□□□□ 0.32
ATL1-203ENST00000553509 PHAXQ9H814 394 aaKnown RBP17.05■□□□□ 0.32
ATL1-203ENST00000553509 ANKRD31Q8N7Z5 1873 aa17.05■□□□□ 0.32
ATL1-203ENST00000553509 BRCA1P38398 1863 aaKnown RBP17.04■□□□□ 0.32
ATL1-203ENST00000553509 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
ATL1-203ENST00000553509 TGFB2P61812 414 aa17.04■□□□□ 0.32
ATL1-203ENST00000553509 PPP1R42Q7Z4L9 355 aa17.04■□□□□ 0.32
ATL1-203ENST00000553509 RNF123Q5XPI4 1314 aa17.03■□□□□ 0.32
ATL1-203ENST00000553509 TCERG1O14776 1098 aaKnown RBP17.03■□□□□ 0.32
ATL1-203ENST00000553509 FLIIQ13045 1269 aa17.03■□□□□ 0.32
ATL1-203ENST00000553509 TCIRG1Q13488 830 aa17.03■□□□□ 0.32
ATL1-203ENST00000553509 ZNF34Q8IZ26 560 aa17.03■□□□□ 0.32
ATL1-203ENST00000553509 PDZRN3Q9UPQ7 1066 aa17.03■□□□□ 0.32
ATL1-203ENST00000553509 GPTP24298 496 aa17.02■□□□□ 0.32
ATL1-203ENST00000553509 GTF2E1P29083 439 aaPredicted RBP17.02■□□□□ 0.32
ATL1-203ENST00000553509 ALDH1L2Q3SY69 923 aa17.02■□□□□ 0.32
ATL1-203ENST00000553509 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
ATL1-203ENST00000553509 PXDNLA1KZ92 1463 aa17.01■□□□□ 0.31
ATL1-203ENST00000553509 PDE6BP35913 854 aa17.01■□□□□ 0.31
ATL1-203ENST00000553509 NEXNQ0ZGT2 675 aa17.01■□□□□ 0.31
ATL1-203ENST00000553509 FKBP5Q13451 457 aaPredicted RBP17.01■□□□□ 0.31
ATL1-203ENST00000553509 KSR2Q6VAB6 950 aa17.01■□□□□ 0.31
ATL1-203ENST00000553509 NLGN2Q8NFZ4 835 aa17.01■□□□□ 0.31
ATL1-203ENST00000553509 UBN2Q6ZU65 1347 aa17■□□□□ 0.31
ATL1-203ENST00000553509 BRIP1Q9BX63 1249 aa17■□□□□ 0.31
ATL1-203ENST00000553509 RIC1Q4ADV7 1423 aa16.99■□□□□ 0.31
ATL1-203ENST00000553509 ARFGEF1Q9Y6D6 1849 aa16.99■□□□□ 0.31
ATL1-203ENST00000553509 PI4KAP2A4QPH2 592 aa16.99■□□□□ 0.31
ATL1-203ENST00000553509 FAM177BA6PVY3 158 aa16.99■□□□□ 0.31
ATL1-203ENST00000553509 TRIM28Q13263 835 aaKnown RBP16.99■□□□□ 0.31
ATL1-203ENST00000553509 NLRP10Q86W26 655 aa16.99■□□□□ 0.31
ATL1-203ENST00000553509 PI4KAP1Q8N8J0 262 aa16.99■□□□□ 0.31
ATL1-203ENST00000553509 METTL22Q9BUU2 404 aaPredicted RBP16.99■□□□□ 0.31
ATL1-203ENST00000553509 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
ATL1-203ENST00000553509 MAP3K2Q9Y2U5 619 aa16.99■□□□□ 0.31
ATL1-203ENST00000553509 LAMB2P55268 1798 aa16.99■□□□□ 0.31
ATL1-203ENST00000553509 COL11A2P13942 1736 aaPredicted RBP16.99■□□□□ 0.31
ATL1-203ENST00000553509 NTSR2O95665 410 aa16.98■□□□□ 0.31
ATL1-203ENST00000553509 SUSD4Q5VX71 490 aa16.98■□□□□ 0.31
ATL1-203ENST00000553509 G2E3Q7L622 706 aa16.98■□□□□ 0.31
ATL1-203ENST00000553509 ISCA1Q9BUE6 129 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms