RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 POTEAQ6S8J7 498 aa13.02□□□□□ -0.33
PCNX1-205ENST00000553508 C7orf43Q8WVR3 580 aa13.02□□□□□ -0.33
PCNX1-205ENST00000553508 VTI1AQ96AJ9 217 aa13.02□□□□□ -0.33
PCNX1-205ENST00000553508 KHNYNO15037 678 aaKnown RBP13.01□□□□□ -0.33
PCNX1-205ENST00000553508 C1orf53Q5VUE5 145 aa13.01□□□□□ -0.33
PCNX1-205ENST00000553508 HSH2DQ96JZ2 352 aa13.01□□□□□ -0.33
PCNX1-205ENST00000553508 IGF1RP08069 1367 aa13□□□□□ -0.33
PCNX1-205ENST00000553508 PPP1R15AO75807 674 aaPredicted RBP13□□□□□ -0.33
PCNX1-205ENST00000553508 ADAMTS2O95450 1211 aa13□□□□□ -0.33
PCNX1-205ENST00000553508 LORP23490 312 aaPredicted RBP13□□□□□ -0.33
PCNX1-205ENST00000553508 NDFIP2Q9NV92 336 aa13□□□□□ -0.33
PCNX1-205ENST00000553508 ATXN7L1Q9ULK2 861 aaPredicted RBP13□□□□□ -0.33
PCNX1-205ENST00000553508 FOXO3O43524 673 aa12.98□□□□□ -0.33
PCNX1-205ENST00000553508 FGFR3P22607 806 aa12.98□□□□□ -0.33
PCNX1-205ENST00000553508 CTBSQ01459 385 aa12.98□□□□□ -0.33
PCNX1-205ENST00000553508 SRSF11Q05519 484 aaKnown RBP12.98□□□□□ -0.33
PCNX1-205ENST00000553508 FKBP5Q13451 457 aaPredicted RBP12.98□□□□□ -0.33
PCNX1-205ENST00000553508 ZNF280CQ8ND82 737 aa12.98□□□□□ -0.33
PCNX1-205ENST00000553508 MAPTP10636 758 aaKnown RBP12.97□□□□□ -0.33
PCNX1-205ENST00000553508 WHAMMQ8TF30 809 aa12.97□□□□□ -0.33
PCNX1-205ENST00000553508 NSFL1CQ9UNZ2 370 aaKnown RBP12.97□□□□□ -0.33
PCNX1-205ENST00000553508 TNP2Q05952 138 aa12.96□□□□□ -0.33
PCNX1-205ENST00000553508 SUSD3Q96L08 255 aa12.96□□□□□ -0.33
PCNX1-205ENST00000553508 MKNK1Q9BUB5 465 aa12.96□□□□□ -0.33
PCNX1-205ENST00000553508 SLURP2P0DP57 97 aa12.95□□□□□ -0.34
PCNX1-205ENST00000553508 CD33P20138 364 aa12.95□□□□□ -0.34
PCNX1-205ENST00000553508 OCLNQ16625 522 aa12.95□□□□□ -0.34
PCNX1-205ENST00000553508 GPC6Q9Y625 555 aaPredicted RBP12.95□□□□□ -0.34
PCNX1-205ENST00000553508 CARNS1A5YM72 827 aa12.94□□□□□ -0.34
PCNX1-205ENST00000553508 BMP4P12644 408 aa12.94□□□□□ -0.34
PCNX1-205ENST00000553508 RTN1Q16799 776 aa12.94□□□□□ -0.34
PCNX1-205ENST00000553508 SLAIN2Q9P270 581 aa12.94□□□□□ -0.34
PCNX1-205ENST00000553508 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
PCNX1-205ENST00000553508 HCN2Q9UL51 889 aa12.94□□□□□ -0.34
PCNX1-205ENST00000553508 C2CD2LO14523 706 aa12.93□□□□□ -0.34
PCNX1-205ENST00000553508 FAM157BP0CG42 384 aa12.93□□□□□ -0.34
PCNX1-205ENST00000553508 SAMD5Q5TGI4 173 aa12.93□□□□□ -0.34
PCNX1-205ENST00000553508 LYPD4Q6UWN0 246 aa12.93□□□□□ -0.34
PCNX1-205ENST00000553508 SVOPQ8N4V2 548 aa12.93□□□□□ -0.34
PCNX1-205ENST00000553508 CLP1Q92989 425 aaKnown RBP12.93□□□□□ -0.34
PCNX1-205ENST00000553508 CEP63Q96MT8 703 aa12.93□□□□□ -0.34
PCNX1-205ENST00000553508 STRN4Q9NRL3 753 aa12.93□□□□□ -0.34
PCNX1-205ENST00000553508 KLK14Q9P0G3 267 aa12.93□□□□□ -0.34
PCNX1-205ENST00000553508 CXXC1Q9P0U4 656 aaPredicted RBP12.93□□□□□ -0.34
PCNX1-205ENST00000553508 ZNF385CQ66K41 422 aaPredicted RBP12.92□□□□□ -0.34
PCNX1-205ENST00000553508 QTRT2Q9H974 415 aaKnown RBP12.92□□□□□ -0.34
PCNX1-205ENST00000553508 DGKZQ13574 1117 aa12.91□□□□□ -0.34
PCNX1-205ENST00000553508 CAPN12Q6ZSI9 719 aa12.91□□□□□ -0.34
PCNX1-205ENST00000553508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.91□□□□□ -0.34
PCNX1-205ENST00000553508 ATP2B4P23634 1241 aa12.9□□□□□ -0.34
PCNX1-205ENST00000553508 MAP2K3P46734 347 aa12.9□□□□□ -0.34
PCNX1-205ENST00000553508 MARK1Q9P0L2 795 aa12.9□□□□□ -0.34
PCNX1-205ENST00000553508 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
PCNX1-205ENST00000553508 SFSWAPQ12872 951 aaKnown RBP12.89□□□□□ -0.35
PCNX1-205ENST00000553508 NAA30Q147X3 362 aaPredicted RBP12.89□□□□□ -0.35
PCNX1-205ENST00000553508 ACDQ96AP0 544 aa12.89□□□□□ -0.35
PCNX1-205ENST00000553508 STK17AQ9UEE5 414 aa12.89□□□□□ -0.35
PCNX1-205ENST00000553508 EFSO43281 561 aa12.88□□□□□ -0.35
PCNX1-205ENST00000553508 CELA2BP08218 269 aaPredicted RBP12.88□□□□□ -0.35
PCNX1-205ENST00000553508 GRIN2CQ14957 1233 aa12.88□□□□□ -0.35
PCNX1-205ENST00000553508 BRD7Q9NPI1 651 aa12.88□□□□□ -0.35
PCNX1-205ENST00000553508 BCS1LQ9Y276 419 aa12.88□□□□□ -0.35
PCNX1-205ENST00000553508 HIF1AQ16665 826 aa12.87□□□□□ -0.35
PCNX1-205ENST00000553508 BTLAQ7Z6A9 289 aa12.87□□□□□ -0.35
PCNX1-205ENST00000553508 OXCT2Q9BYC2 517 aaPredicted RBP12.87□□□□□ -0.35
PCNX1-205ENST00000553508 LRFN2Q9ULH4 789 aa12.87□□□□□ -0.35
PCNX1-205ENST00000553508 FAM181BA6NEQ2 426 aa12.86□□□□□ -0.35
PCNX1-205ENST00000553508 MAP3K10Q02779 954 aa12.86□□□□□ -0.35
PCNX1-205ENST00000553508 TYRO3Q06418 890 aa12.86□□□□□ -0.35
PCNX1-205ENST00000553508 SAP130Q9H0E3 1048 aa12.86□□□□□ -0.35
PCNX1-205ENST00000553508 PRR12Q9ULL5 1215 aa12.86□□□□□ -0.35
PCNX1-205ENST00000553508 SCNN1AP37088 669 aa12.85□□□□□ -0.35
PCNX1-205ENST00000553508 C11orf91Q3C1V1 193 aa12.85□□□□□ -0.35
PCNX1-205ENST00000553508 COX20Q5RI15 118 aa12.85□□□□□ -0.35
PCNX1-205ENST00000553508 TGFBR3LH3BV60 316 aa12.84□□□□□ -0.35
PCNX1-205ENST00000553508 LAMC2Q13753 1193 aa12.84□□□□□ -0.35
PCNX1-205ENST00000553508 MYO19Q96H55 970 aa12.84□□□□□ -0.35
PCNX1-205ENST00000553508 BCRP11274 1271 aa12.83□□□□□ -0.36
PCNX1-205ENST00000553508 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
PCNX1-205ENST00000553508 GGA1Q9UJY5 639 aa12.83□□□□□ -0.36
PCNX1-205ENST00000553508 NEURL1BA8MQ27 555 aa12.82□□□□□ -0.36
PCNX1-205ENST00000553508 C16orf46Q6P387 395 aa12.82□□□□□ -0.36
PCNX1-205ENST00000553508 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
PCNX1-205ENST00000553508 SEPT3Q9UH03 358 aa12.82□□□□□ -0.36
PCNX1-205ENST00000553508 KCNH4Q9UQ05 1017 aa12.82□□□□□ -0.36
PCNX1-205ENST00000553508 PTCD1O75127 700 aaKnown RBP12.81□□□□□ -0.36
PCNX1-205ENST00000553508 PCBP4P57723 403 aaKnown RBP12.81□□□□□ -0.36
PCNX1-205ENST00000553508 RAB44Q7Z6P3 723 aaPredicted RBP12.81□□□□□ -0.36
PCNX1-205ENST00000553508 SLC30A3Q99726 388 aa12.81□□□□□ -0.36
PCNX1-205ENST00000553508 DNMT3AQ9Y6K1 912 aaPredicted RBP12.81□□□□□ -0.36
PCNX1-205ENST00000553508 ARHGEF15O94989 841 aa12.8□□□□□ -0.36
PCNX1-205ENST00000553508 IDH3AP50213 366 aa12.8□□□□□ -0.36
PCNX1-205ENST00000553508 C1orf229Q6ZS94 237 aaPredicted RBP12.8□□□□□ -0.36
PCNX1-205ENST00000553508 GALNT6Q8NCL4 622 aa12.8□□□□□ -0.36
PCNX1-205ENST00000553508 DMGDHQ9UI17 866 aaKnown RBP12.8□□□□□ -0.36
PCNX1-205ENST00000553508 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
PCNX1-205ENST00000553508 MICAL2O94851 1124 aa12.79□□□□□ -0.36
PCNX1-205ENST00000553508 IER5Q5VY09 327 aa12.79□□□□□ -0.36
PCNX1-205ENST00000553508 GOLGA6L1Q8N7Z2 621 aa12.79□□□□□ -0.36
PCNX1-205ENST00000553508 NEDD1Q8NHV4 660 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms