RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 DDX58O95786 925 aaKnown RBP23.3■■□□□ 1.32
LRP1-204ENST00000553277 ATP6V1AP38606 617 aa23.3■■□□□ 1.32
LRP1-204ENST00000553277 BECN1Q14457 450 aa23.3■■□□□ 1.32
LRP1-204ENST00000553277 PI4KAP1Q8N8J0 262 aa23.3■■□□□ 1.32
LRP1-204ENST00000553277 MYL6BP14649 208 aa23.29■■□□□ 1.32
LRP1-204ENST00000553277 COL5A3P25940 1745 aaPredicted RBP23.29■■□□□ 1.32
LRP1-204ENST00000553277 NUCB1Q02818 461 aa23.29■■□□□ 1.32
LRP1-204ENST00000553277 ITPK1Q13572 414 aa23.29■■□□□ 1.32
LRP1-204ENST00000553277 COPS6Q7L5N1 327 aa23.29■■□□□ 1.32
LRP1-204ENST00000553277 ILDR1Q86SU0 546 aaPredicted RBP23.29■■□□□ 1.32
LRP1-204ENST00000553277 XAGE3Q8WTP9 111 aa23.29■■□□□ 1.32
LRP1-204ENST00000553277 DNAAF4Q8WXU2 420 aa23.29■■□□□ 1.32
LRP1-204ENST00000553277 TBC1D32Q96NH3 1257 aa23.29■■□□□ 1.32
LRP1-204ENST00000553277 SEC24BO95487 1268 aa23.28■■□□□ 1.32
LRP1-204ENST00000553277 GCC1Q96CN9 775 aa23.28■■□□□ 1.32
LRP1-204ENST00000553277 INTS5Q6P9B9 1019 aaKnown RBP23.27■■□□□ 1.32
LRP1-204ENST00000553277 ANKRD13DQ6ZTN6 518 aa23.27■■□□□ 1.32
LRP1-204ENST00000553277 MYH14Q7Z406 1995 aaKnown RBP23.26■■□□□ 1.31
LRP1-204ENST00000553277 BEND3Q5T5X7 828 aa23.26■■□□□ 1.31
LRP1-204ENST00000553277 IL6STP40189 918 aaPredicted RBP23.25■■□□□ 1.31
LRP1-204ENST00000553277 PIP4K2AP48426 406 aaPredicted RBP23.25■■□□□ 1.31
LRP1-204ENST00000553277 PLBD2Q8NHP8 589 aa23.25■■□□□ 1.31
LRP1-204ENST00000553277 MAP3K2Q9Y2U5 619 aa23.25■■□□□ 1.31
LRP1-204ENST00000553277 SLC4A10Q6U841 1118 aa23.25■■□□□ 1.31
LRP1-204ENST00000553277 CRKLP46109 303 aaKnown RBP23.24■■□□□ 1.31
LRP1-204ENST00000553277 RC3H1Q5TC82 1133 aaKnown RBP23.24■■□□□ 1.31
LRP1-204ENST00000553277 CCDC87Q9NVE4 849 aa23.24■■□□□ 1.31
LRP1-204ENST00000553277 TRIM37O94972 964 aa23.23■■□□□ 1.31
LRP1-204ENST00000553277 EIF5P55010 431 aaKnown RBP23.23■■□□□ 1.31
LRP1-204ENST00000553277 AIMP1Q12904 312 aaKnown RBP23.23■■□□□ 1.31
LRP1-204ENST00000553277 ZBTB1Q9Y2K1 713 aa23.23■■□□□ 1.31
LRP1-204ENST00000553277 CNTNAP4Q9C0A0 1308 aa23.23■■□□□ 1.31
LRP1-204ENST00000553277 ALDH1L1O75891 902 aa23.22■■□□□ 1.31
LRP1-204ENST00000553277 LINS1Q8NG48 757 aa23.22■■□□□ 1.31
LRP1-204ENST00000553277 METTL22Q9BUU2 404 aaPredicted RBP23.22■■□□□ 1.31
LRP1-204ENST00000553277 SRCIN1Q9C0H9 1055 aa23.22■■□□□ 1.31
LRP1-204ENST00000553277 CHD1LQ86WJ1 897 aa23.22■■□□□ 1.31
LRP1-204ENST00000553277 NUP188Q5SRE5 1749 aa23.21■■□□□ 1.31
LRP1-204ENST00000553277 TAF1LQ8IZX4 1826 aa23.21■■□□□ 1.31
LRP1-204ENST00000553277 TTLL7Q6ZT98 887 aa23.21■■□□□ 1.31
LRP1-204ENST00000553277 RIC3Q7Z5B4 369 aa23.21■■□□□ 1.31
LRP1-204ENST00000553277 LINC00116Q8NCU8 138 aa23.21■■□□□ 1.31
LRP1-204ENST00000553277 ARFGEF2Q9Y6D5 1785 aa23.21■■□□□ 1.31
LRP1-204ENST00000553277 PLSCR1O15162 318 aa23.2■■□□□ 1.3
LRP1-204ENST00000553277 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
LRP1-204ENST00000553277 SLC27A3Q5K4L6 730 aa23.2■■□□□ 1.3
LRP1-204ENST00000553277 CCNL1Q9UK58 526 aaPredicted RBP23.2■■□□□ 1.3
LRP1-204ENST00000553277 USP44Q9H0E7 712 aa23.19■■□□□ 1.3
LRP1-204ENST00000553277 HMGB2P26583 209 aaKnown RBP23.19■■□□□ 1.3
LRP1-204ENST00000553277 NFKBIBQ15653 356 aa23.19■■□□□ 1.3
LRP1-204ENST00000553277 IGKV5-2P06315 115 aa23.18■■□□□ 1.3
LRP1-204ENST00000553277 MEIS3Q99687 375 aa23.18■■□□□ 1.3
LRP1-204ENST00000553277 ERVV-1B6SEH8 477 aa23.17■■□□□ 1.3
LRP1-204ENST00000553277 GNAI3P08754 354 aa23.17■■□□□ 1.3
LRP1-204ENST00000553277 UTYO14607 1347 aa23.17■■□□□ 1.3
LRP1-204ENST00000553277 MAP3K15Q6ZN16 1313 aa23.17■■□□□ 1.3
LRP1-204ENST00000553277 NEXNQ0ZGT2 675 aa23.16■■□□□ 1.3
LRP1-204ENST00000553277 BMP2KLQ5H9B9 411 aa23.16■■□□□ 1.3
LRP1-204ENST00000553277 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
LRP1-204ENST00000553277 LRRC4BQ9NT99 713 aa23.16■■□□□ 1.3
LRP1-204ENST00000553277 TNS1Q9HBL0 1735 aaKnown RBP23.15■■□□□ 1.3
LRP1-204ENST00000553277 RGPD3A6NKT7 1758 aaPredicted RBP23.15■■□□□ 1.3
LRP1-204ENST00000553277 RGPD4Q7Z3J3 1758 aa23.15■■□□□ 1.3
LRP1-204ENST00000553277 NEURL1BA8MQ27 555 aa23.15■■□□□ 1.3
LRP1-204ENST00000553277 RGL2O15211 777 aa23.15■■□□□ 1.3
LRP1-204ENST00000553277 EIF5BO60841 1220 aaKnown RBP23.15■■□□□ 1.3
LRP1-204ENST00000553277 KCNQ4P56696 695 aa23.14■■□□□ 1.29
LRP1-204ENST00000553277 KIF6Q6ZMV9 814 aa23.14■■□□□ 1.29
LRP1-204ENST00000553277 PROM2Q8N271 834 aa23.14■■□□□ 1.29
LRP1-204ENST00000553277 RPS6KA4O75676 772 aa23.13■■□□□ 1.29
LRP1-204ENST00000553277 GIGYF2Q6Y7W6 1299 aaKnown RBP23.13■■□□□ 1.29
LRP1-204ENST00000553277 TCIRG1Q13488 830 aa23.13■■□□□ 1.29
LRP1-204ENST00000553277 CWF19L2Q2TBE0 894 aaKnown RBP23.13■■□□□ 1.29
LRP1-204ENST00000553277 MYD88Q99836 296 aa23.13■■□□□ 1.29
LRP1-204ENST00000553277 C22orf23Q9BZE7 217 aa23.13■■□□□ 1.29
LRP1-204ENST00000553277 C4BP0C0L5 1744 aa23.12■■□□□ 1.29
LRP1-204ENST00000553277 GCKRQ14397 625 aa23.12■■□□□ 1.29
LRP1-204ENST00000553277 SIRT2Q8IXJ6 389 aa23.12■■□□□ 1.29
LRP1-204ENST00000553277 ISCA1Q9BUE6 129 aa23.12■■□□□ 1.29
LRP1-204ENST00000553277 A0A087WZG4 1122 aa23.11■■□□□ 1.29
LRP1-204ENST00000553277 GNAI2P04899 355 aa23.11■■□□□ 1.29
LRP1-204ENST00000553277 DZIP3Q86Y13 1208 aaKnown RBP23.11■■□□□ 1.29
LRP1-204ENST00000553277 RPAP2Q8IXW5 612 aaPredicted RBP23.11■■□□□ 1.29
LRP1-204ENST00000553277 ZBTB3Q9H5J0 574 aa23.11■■□□□ 1.29
LRP1-204ENST00000553277 COL15A1P39059 1388 aa23.11■■□□□ 1.29
LRP1-204ENST00000553277 TXNRD1Q16881 649 aa23.1■■□□□ 1.29
LRP1-204ENST00000553277 LNPKQ9C0E8 428 aa23.1■■□□□ 1.29
LRP1-204ENST00000553277 NUP98P52948 1817 aa23.1■■□□□ 1.29
LRP1-204ENST00000553277 GRM8O00222 908 aa23.09■■□□□ 1.29
LRP1-204ENST00000553277 APBA3O96018 575 aa23.09■■□□□ 1.29
LRP1-204ENST00000553277 NBPF7P0C2Y1 421 aaPredicted RBP23.09■■□□□ 1.29
LRP1-204ENST00000553277 UBTFL1P0CB47 393 aaPredicted RBP23.09■■□□□ 1.29
LRP1-204ENST00000553277 CCDC191Q8NCU4 936 aa23.09■■□□□ 1.29
LRP1-204ENST00000553277 HDAC5Q9UQL6 1122 aa23.09■■□□□ 1.29
LRP1-204ENST00000553277 CAMTA2O94983 1202 aa23.09■■□□□ 1.29
LRP1-204ENST00000553277 RBM25P49756 843 aaKnown RBP23.09■■□□□ 1.29
LRP1-204ENST00000553277 HSP90AB3PQ58FF7 597 aa23.09■■□□□ 1.29
LRP1-204ENST00000553277 ANKRD44Q8N8A2 993 aa23.09■■□□□ 1.29
LRP1-204ENST00000553277 ZNF330Q9Y3S2 320 aaPredicted RBP23.09■■□□□ 1.29
LRP1-204ENST00000553277 ANKRD45Q5TZF3 282 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms