RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 PIP4K2AP48426 406 aaPredicted RBP9.99□□□□□ -0.81
NPAS3-213ENST00000552874 GOLGA2Q08379 1002 aa9.99□□□□□ -0.81
NPAS3-213ENST00000552874 AK7Q96M32 723 aa9.99□□□□□ -0.81
NPAS3-213ENST00000552874 TEX13AQ9BXU3 409 aaPredicted RBP9.99□□□□□ -0.81
NPAS3-213ENST00000552874 BCL2L12Q9HB09 334 aa9.99□□□□□ -0.81
NPAS3-213ENST00000552874 LAS1LQ9Y4W2 734 aaKnown RBP9.99□□□□□ -0.81
NPAS3-213ENST00000552874 USP42Q9H9J4 1324 aaKnown RBP9.99□□□□□ -0.81
NPAS3-213ENST00000552874 ATP10DQ9P241 1426 aa9.99□□□□□ -0.81
NPAS3-213ENST00000552874 A0A1B0GUL6 1792 aa9.98□□□□□ -0.81
NPAS3-213ENST00000552874 ARFGEF1Q9Y6D6 1849 aa9.98□□□□□ -0.81
NPAS3-213ENST00000552874 IL6STP40189 918 aaPredicted RBP9.98□□□□□ -0.81
NPAS3-213ENST00000552874 EXOSC9Q06265 439 aaKnown RBP9.98□□□□□ -0.81
NPAS3-213ENST00000552874 VAMP4O75379 141 aa9.97□□□□□ -0.81
NPAS3-213ENST00000552874 STARD3NLO95772 234 aa9.97□□□□□ -0.81
NPAS3-213ENST00000552874 ARHGEF1Q92888 912 aaKnown RBP9.97□□□□□ -0.81
NPAS3-213ENST00000552874 TFCP2L1Q9NZI6 479 aa9.97□□□□□ -0.81
NPAS3-213ENST00000552874 TAF1P21675 1872 aa9.96□□□□□ -0.81
NPAS3-213ENST00000552874 PHF14O94880 888 aa9.96□□□□□ -0.82
NPAS3-213ENST00000552874 CAMTA2O94983 1202 aa9.96□□□□□ -0.82
NPAS3-213ENST00000552874 ANXA1P04083 346 aa9.96□□□□□ -0.82
NPAS3-213ENST00000552874 GYS1P13807 737 aa9.96□□□□□ -0.82
NPAS3-213ENST00000552874 PTGER2P43116 358 aa9.96□□□□□ -0.82
NPAS3-213ENST00000552874 TWISTNBQ3B726 338 aaPredicted RBP9.96□□□□□ -0.82
NPAS3-213ENST00000552874 MYH16Q9H6N6 1097 aa9.96□□□□□ -0.82
NPAS3-213ENST00000552874 DDX21Q9NR30 783 aaKnown RBP eCLIP9.96□□□□□ -0.82
NPAS3-213ENST00000552874 CHPF2Q9P2E5 772 aa9.96□□□□□ -0.82
NPAS3-213ENST00000552874 SRP68Q9UHB9 627 aaKnown RBP9.96□□□□□ -0.82
NPAS3-213ENST00000552874 RTCBQ9Y3I0 505 aaKnown RBP9.96□□□□□ -0.82
NPAS3-213ENST00000552874 C10orf71Q711Q0 1435 aa9.96□□□□□ -0.82
NPAS3-213ENST00000552874 LRRC37AA6NMS7 1700 aa9.96□□□□□ -0.82
NPAS3-213ENST00000552874 SPEF2Q9C093 1822 aa9.96□□□□□ -0.82
NPAS3-213ENST00000552874 RGL2O15211 777 aa9.95□□□□□ -0.82
NPAS3-213ENST00000552874 HMGB2P26583 209 aaKnown RBP9.95□□□□□ -0.82
NPAS3-213ENST00000552874 CANXP27824 592 aaKnown RBP9.95□□□□□ -0.82
NPAS3-213ENST00000552874 HDGFL1Q5TGJ6 251 aa9.95□□□□□ -0.82
NPAS3-213ENST00000552874 FLAD1Q8NFF5 587 aa9.95□□□□□ -0.82
NPAS3-213ENST00000552874 NARFQ9UHQ1 456 aa9.95□□□□□ -0.82
NPAS3-213ENST00000552874 ADCY9O60503 1353 aa9.95□□□□□ -0.82
NPAS3-213ENST00000552874 PXDNLA1KZ92 1463 aa9.95□□□□□ -0.82
NPAS3-213ENST00000552874 COL4A1P02462 1669 aa9.95□□□□□ -0.82
NPAS3-213ENST00000552874 ELL2O00472 640 aaPredicted RBP9.94□□□□□ -0.82
NPAS3-213ENST00000552874 TTLL7Q6ZT98 887 aa9.94□□□□□ -0.82
NPAS3-213ENST00000552874 SLC16A10Q8TF71 515 aa9.94□□□□□ -0.82
NPAS3-213ENST00000552874 RIC1Q4ADV7 1423 aa9.93□□□□□ -0.82
NPAS3-213ENST00000552874 CARMIL3Q8ND23 1372 aa9.93□□□□□ -0.82
NPAS3-213ENST00000552874 EIF2S2P20042 333 aaKnown RBP9.93□□□□□ -0.82
NPAS3-213ENST00000552874 DDR1Q08345 913 aa9.93□□□□□ -0.82
NPAS3-213ENST00000552874 FKBP8Q14318 412 aa9.93□□□□□ -0.82
NPAS3-213ENST00000552874 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
NPAS3-213ENST00000552874 MTFR1LQ9H019 292 aa9.93□□□□□ -0.82
NPAS3-213ENST00000552874 IBTKQ9P2D0 1353 aaPredicted RBP9.92□□□□□ -0.82
NPAS3-213ENST00000552874 MAP3K15Q6ZN16 1313 aa9.92□□□□□ -0.82
NPAS3-213ENST00000552874 ZBTB7AO95365 584 aa9.92□□□□□ -0.82
NPAS3-213ENST00000552874 TRAPPC3LQ5T215 181 aa9.92□□□□□ -0.82
NPAS3-213ENST00000552874 USPL1Q5W0Q7 1092 aa9.92□□□□□ -0.82
NPAS3-213ENST00000552874 G2E3Q7L622 706 aa9.92□□□□□ -0.82
NPAS3-213ENST00000552874 SPDYE1Q8NFV5 336 aaPredicted RBP9.92□□□□□ -0.82
NPAS3-213ENST00000552874 PHAXQ9H814 394 aaKnown RBP9.92□□□□□ -0.82
NPAS3-213ENST00000552874 DBF4Q9UBU7 674 aaPredicted RBP9.92□□□□□ -0.82
NPAS3-213ENST00000552874 LTBP1Q14766 1721 aa9.91□□□□□ -0.82
NPAS3-213ENST00000552874 UBN2Q6ZU65 1347 aa9.91□□□□□ -0.82
NPAS3-213ENST00000552874 A0A087WZG4 1122 aa9.91□□□□□ -0.82
NPAS3-213ENST00000552874 CT47B1P0C2W7 299 aaPredicted RBP9.91□□□□□ -0.82
NPAS3-213ENST00000552874 MYL6BP14649 208 aa9.91□□□□□ -0.82
NPAS3-213ENST00000552874 TM4SF1P30408 202 aa9.91□□□□□ -0.82
NPAS3-213ENST00000552874 HLFQ16534 295 aa9.91□□□□□ -0.82
NPAS3-213ENST00000552874 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
NPAS3-213ENST00000552874 DZIP3Q86Y13 1208 aaKnown RBP9.91□□□□□ -0.82
NPAS3-213ENST00000552874 XAGE3Q8WTP9 111 aa9.91□□□□□ -0.82
NPAS3-213ENST00000552874 TBC1D2BQ9UPU7 963 aa9.91□□□□□ -0.82
NPAS3-213ENST00000552874 SBF1O95248 1867 aa9.9□□□□□ -0.82
NPAS3-213ENST00000552874 FER1L6Q2WGJ9 1857 aa9.9□□□□□ -0.82
NPAS3-213ENST00000552874 ERVV-1B6SEH8 477 aa9.9□□□□□ -0.82
NPAS3-213ENST00000552874 POLRMTO00411 1230 aaKnown RBP9.9□□□□□ -0.82
NPAS3-213ENST00000552874 BRPF1P55201 1214 aaPredicted RBP9.9□□□□□ -0.82
NPAS3-213ENST00000552874 CCDC30Q5VVM6 783 aa9.9□□□□□ -0.82
NPAS3-213ENST00000552874 MRPL50Q8N5N7 158 aaKnown RBP9.9□□□□□ -0.82
NPAS3-213ENST00000552874 SSH1Q8WYL5 1049 aa9.9□□□□□ -0.82
NPAS3-213ENST00000552874 ZNF428Q96B54 188 aa9.9□□□□□ -0.82
NPAS3-213ENST00000552874 HYPKQ9NX55 129 aa9.9□□□□□ -0.82
NPAS3-213ENST00000552874 SLX4Q8IY92 1834 aa9.9□□□□□ -0.82
NPAS3-213ENST00000552874 CCDC88AQ3V6T2 1871 aa9.89□□□□□ -0.83
NPAS3-213ENST00000552874 ABCC12Q96J65 1359 aa9.89□□□□□ -0.83
NPAS3-213ENST00000552874 TCERG1O14776 1098 aaKnown RBP9.89□□□□□ -0.83
NPAS3-213ENST00000552874 RFC4P35249 363 aa9.89□□□□□ -0.83
NPAS3-213ENST00000552874 RARSP54136 660 aaKnown RBP9.89□□□□□ -0.83
NPAS3-213ENST00000552874 NFIXQ14938 502 aa9.89□□□□□ -0.83
NPAS3-213ENST00000552874 ALDH1L2Q3SY69 923 aa9.89□□□□□ -0.83
NPAS3-213ENST00000552874 TBC1D9BQ66K14 1250 aa9.89□□□□□ -0.83
NPAS3-213ENST00000552874 CLEC4GQ6UXB4 293 aa9.89□□□□□ -0.83
NPAS3-213ENST00000552874 GIGYF2Q6Y7W6 1299 aaKnown RBP9.89□□□□□ -0.83
NPAS3-213ENST00000552874 COPS6Q7L5N1 327 aa9.89□□□□□ -0.83
NPAS3-213ENST00000552874 CHD4Q14839 1912 aa9.88□□□□□ -0.83
NPAS3-213ENST00000552874 DICER1Q9UPY3 1922 aaKnown RBP9.88□□□□□ -0.83
NPAS3-213ENST00000552874 FLIIQ13045 1269 aa9.88□□□□□ -0.83
NPAS3-213ENST00000552874 ZNF34Q8IZ26 560 aa9.88□□□□□ -0.83
NPAS3-213ENST00000552874 PLBD2Q8NHP8 589 aa9.88□□□□□ -0.83
NPAS3-213ENST00000552874 ZBTB3Q9H5J0 574 aa9.88□□□□□ -0.83
NPAS3-213ENST00000552874 CLEC11AQ9Y240 323 aa9.88□□□□□ -0.83
NPAS3-213ENST00000552874 ZNF646O15015 1829 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms