RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 NBPF15Q8N660 670 aa18.23■□□□□ 0.51
SMARCC2-212ENST00000552566 RBM46Q8TBY0 533 aaKnown RBP18.23■□□□□ 0.51
SMARCC2-212ENST00000552566 THUMPD2Q9BTF0 503 aaKnown RBP18.23■□□□□ 0.51
SMARCC2-212ENST00000552566 NGEFQ8N5V2 710 aa18.22■□□□□ 0.51
SMARCC2-212ENST00000552566 ADAMTS8Q9UP79 889 aa18.22■□□□□ 0.51
SMARCC2-212ENST00000552566 MAPK8IP3Q9UPT6 1336 aa18.22■□□□□ 0.51
SMARCC2-212ENST00000552566 NFE2L2Q16236 605 aa18.21■□□□□ 0.51
SMARCC2-212ENST00000552566 CLEC4GQ6UXB4 293 aa18.21■□□□□ 0.51
SMARCC2-212ENST00000552566 PLEKHF1Q96S99 279 aa18.21■□□□□ 0.51
SMARCC2-212ENST00000552566 NIP7Q9Y221 180 aaKnown RBP eCLIP18.21■□□□□ 0.51
SMARCC2-212ENST00000552566 CEP350Q5VT06 3117 aa18.21■□□□□ 0.51
SMARCC2-212ENST00000552566 CNKSR1Q969H4 720 aa18.2■□□□□ 0.5
SMARCC2-212ENST00000552566 ZC3H4Q9UPT8 1303 aaKnown RBP18.2■□□□□ 0.5
SMARCC2-212ENST00000552566 GLTPD2A6NH11 291 aa18.19■□□□□ 0.5
SMARCC2-212ENST00000552566 SRGNP10124 158 aa18.19■□□□□ 0.5
SMARCC2-212ENST00000552566 STYK1Q6J9G0 422 aa18.19■□□□□ 0.5
SMARCC2-212ENST00000552566 PRPF40BQ6NWY9 871 aaKnown RBP18.19■□□□□ 0.5
SMARCC2-212ENST00000552566 MASTLQ96GX5 879 aa18.19■□□□□ 0.5
SMARCC2-212ENST00000552566 RRP7AQ9Y3A4 280 aaKnown RBP18.19■□□□□ 0.5
SMARCC2-212ENST00000552566 NRXN2Q9P2S2 1712 aa18.18■□□□□ 0.5
SMARCC2-212ENST00000552566 GTF2E1P29083 439 aaPredicted RBP18.18■□□□□ 0.5
SMARCC2-212ENST00000552566 FSTL1Q12841 308 aa18.18■□□□□ 0.5
SMARCC2-212ENST00000552566 HLFQ16534 295 aa18.18■□□□□ 0.5
SMARCC2-212ENST00000552566 ERFEQ4G0M1 354 aa18.18■□□□□ 0.5
SMARCC2-212ENST00000552566 TPTE2Q6XPS3 522 aa18.18■□□□□ 0.5
SMARCC2-212ENST00000552566 BRCA1P38398 1863 aaKnown RBP18.18■□□□□ 0.5
SMARCC2-212ENST00000552566 EIF4A1P60842 406 aaKnown RBP18.17■□□□□ 0.5
SMARCC2-212ENST00000552566 HTRA3P83110 453 aa18.17■□□□□ 0.5
SMARCC2-212ENST00000552566 DPY19L2Q6NUT2 758 aa18.17■□□□□ 0.5
SMARCC2-212ENST00000552566 TAOK3Q9H2K8 898 aa18.17■□□□□ 0.5
SMARCC2-212ENST00000552566 SIPA1L3O60292 1781 aaPredicted RBP18.17■□□□□ 0.5
SMARCC2-212ENST00000552566 MYL6BP14649 208 aa18.16■□□□□ 0.5
SMARCC2-212ENST00000552566 VEGFAP15692 232 aaPredicted RBP18.16■□□□□ 0.5
SMARCC2-212ENST00000552566 RUNDC1Q96C34 613 aa18.16■□□□□ 0.5
SMARCC2-212ENST00000552566 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
SMARCC2-212ENST00000552566 ARFGEF1Q9Y6D6 1849 aa18.15■□□□□ 0.5
SMARCC2-212ENST00000552566 SMC1BQ8NDV3 1235 aa18.15■□□□□ 0.5
SMARCC2-212ENST00000552566 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.5
SMARCC2-212ENST00000552566 NPR1P16066 1061 aa18.14■□□□□ 0.49
SMARCC2-212ENST00000552566 RIPK4P57078 832 aa18.14■□□□□ 0.49
SMARCC2-212ENST00000552566 SOGA3Q5TF21 947 aa18.14■□□□□ 0.49
SMARCC2-212ENST00000552566 KIF6Q6ZMV9 814 aa18.14■□□□□ 0.49
SMARCC2-212ENST00000552566 TSPYL4Q9UJ04 414 aa18.14■□□□□ 0.49
SMARCC2-212ENST00000552566 VIRMAQ69YN4 1812 aaKnown RBP18.14■□□□□ 0.49
SMARCC2-212ENST00000552566 RGL2O15211 777 aa18.13■□□□□ 0.49
SMARCC2-212ENST00000552566 TTLL7Q6ZT98 887 aa18.13■□□□□ 0.49
SMARCC2-212ENST00000552566 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
SMARCC2-212ENST00000552566 DNAJC5GQ8N7S2 189 aa18.13■□□□□ 0.49
SMARCC2-212ENST00000552566 YTHDC1Q96MU7 727 aaKnown RBP18.13■□□□□ 0.49
SMARCC2-212ENST00000552566 CCDC93Q567U6 631 aa18.12■□□□□ 0.49
SMARCC2-212ENST00000552566 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
SMARCC2-212ENST00000552566 ERVV-1B6SEH8 477 aa18.11■□□□□ 0.49
SMARCC2-212ENST00000552566 GPTP24298 496 aa18.11■□□□□ 0.49
SMARCC2-212ENST00000552566 HNRNPUQ00839 825 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMARCC2-212ENST00000552566 NUTM1Q86Y26 1132 aa18.11■□□□□ 0.49
SMARCC2-212ENST00000552566 MAP3K15Q6ZN16 1313 aa18.11■□□□□ 0.49
SMARCC2-212ENST00000552566 LTBP3Q9NS15 1303 aa18.11■□□□□ 0.49
SMARCC2-212ENST00000552566 KLRG2A4D1S0 409 aaPredicted RBP18.1■□□□□ 0.49
SMARCC2-212ENST00000552566 EIF2S2P20042 333 aaKnown RBP18.1■□□□□ 0.49
SMARCC2-212ENST00000552566 NEUROD2Q15784 382 aa18.1■□□□□ 0.49
SMARCC2-212ENST00000552566 OLFM4Q6UX06 510 aa18.1■□□□□ 0.49
SMARCC2-212ENST00000552566 NYXQ9GZU5 481 aa18.1■□□□□ 0.49
SMARCC2-212ENST00000552566 DDNO94850 711 aaPredicted RBP18.09■□□□□ 0.49
SMARCC2-212ENST00000552566 C7orf43Q8WVR3 580 aa18.09■□□□□ 0.49
SMARCC2-212ENST00000552566 POTECB2RU33 542 aa18.08■□□□□ 0.48
SMARCC2-212ENST00000552566 ALDH1B1P30837 517 aa18.08■□□□□ 0.48
SMARCC2-212ENST00000552566 TMPOP42166 694 aaKnown RBP18.08■□□□□ 0.48
SMARCC2-212ENST00000552566 ZNF277Q9NRM2 450 aaPredicted RBP18.08■□□□□ 0.48
SMARCC2-212ENST00000552566 APAF1O14727 1248 aa18.07■□□□□ 0.48
SMARCC2-212ENST00000552566 FKBP4Q02790 459 aaKnown RBP eCLIP18.07■□□□□ 0.48
SMARCC2-212ENST00000552566 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
SMARCC2-212ENST00000552566 IFFO2Q5TF58 517 aa18.07■□□□□ 0.48
SMARCC2-212ENST00000552566 NECTIN2Q92692 538 aa18.07■□□□□ 0.48
SMARCC2-212ENST00000552566 KLRG1Q96E93 195 aa18.07■□□□□ 0.48
SMARCC2-212ENST00000552566 SUSD4Q5VX71 490 aa18.06■□□□□ 0.48
SMARCC2-212ENST00000552566 RTKN2Q8IZC4 609 aa18.06■□□□□ 0.48
SMARCC2-212ENST00000552566 RPGRQ92834 1020 aaKnown RBP18.06■□□□□ 0.48
SMARCC2-212ENST00000552566 LAS1LQ9Y4W2 734 aaKnown RBP18.06■□□□□ 0.48
SMARCC2-212ENST00000552566 DLEC1Q9Y238 1755 aa18.06■□□□□ 0.48
SMARCC2-212ENST00000552566 ANKRD31Q8N7Z5 1873 aa18.05■□□□□ 0.48
SMARCC2-212ENST00000552566 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
SMARCC2-212ENST00000552566 UBN2Q6ZU65 1347 aa18.05■□□□□ 0.48
SMARCC2-212ENST00000552566 ANXA1P04083 346 aa18.05■□□□□ 0.48
SMARCC2-212ENST00000552566 COL11A2P13942 1736 aaPredicted RBP18.05■□□□□ 0.48
SMARCC2-212ENST00000552566 BCORQ6W2J9 1755 aa18.04■□□□□ 0.48
SMARCC2-212ENST00000552566 ERBB4Q15303 1308 aa18.04■□□□□ 0.48
SMARCC2-212ENST00000552566 SALL2Q9Y467 1007 aaPredicted RBP18.04■□□□□ 0.48
SMARCC2-212ENST00000552566 TCERG1O14776 1098 aaKnown RBP18.03■□□□□ 0.48
SMARCC2-212ENST00000552566 AIMP1Q12904 312 aaKnown RBP18.03■□□□□ 0.48
SMARCC2-212ENST00000552566 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
SMARCC2-212ENST00000552566 CRY2Q49AN0 593 aa18.03■□□□□ 0.48
SMARCC2-212ENST00000552566 GIGYF2Q6Y7W6 1299 aaKnown RBP18.03■□□□□ 0.48
SMARCC2-212ENST00000552566 ZNF34Q8IZ26 560 aa18.03■□□□□ 0.48
SMARCC2-212ENST00000552566 SYNE4Q8N205 404 aa18.03■□□□□ 0.48
SMARCC2-212ENST00000552566 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
SMARCC2-212ENST00000552566 TNRC6CQ9HCJ0 1690 aaKnown RBP18.03■□□□□ 0.48
SMARCC2-212ENST00000552566 POTEIP0CG38 1075 aa18.02■□□□□ 0.48
SMARCC2-212ENST00000552566 POTEJP0CG39 1038 aa18.02■□□□□ 0.48
SMARCC2-212ENST00000552566 PDIA6Q15084 440 aa18.02■□□□□ 0.48
SMARCC2-212ENST00000552566 CHADLQ6NUI6 762 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms