RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 ERICH2A1L162 156 aa12.82□□□□□ -0.36
TGFBR1-209ENST00000552516 UBAP1LF5GYI3 381 aa12.82□□□□□ -0.36
TGFBR1-209ENST00000552516 TRMT1LQ7Z2T5 733 aaKnown RBP12.82□□□□□ -0.36
TGFBR1-209ENST00000552516 SUCLG2Q96I99 432 aa12.82□□□□□ -0.36
TGFBR1-209ENST00000552516 NMIQ13287 307 aaPredicted RBP12.82□□□□□ -0.36
TGFBR1-209ENST00000552516 ZNF830Q96NB3 372 aaPredicted RBP12.82□□□□□ -0.36
TGFBR1-209ENST00000552516 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
TGFBR1-209ENST00000552516 HTATSF1O43719 755 aaKnown RBP12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 SIRT1Q96EB6 747 aa12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 SASS6Q6UVJ0 657 aa12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 TTLL7Q6ZT98 887 aa12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 BRF1Q92994 677 aa12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 CWC25Q9NXE8 425 aaPredicted RBP12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 BAG4O95429 457 aaKnown RBP12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 USP44Q9H0E7 712 aa12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 GJB2P29033 226 aa12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 PALD1Q9ULE6 856 aa12.81□□□□□ -0.36
TGFBR1-209ENST00000552516 MIGA1Q8NAN2 632 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 AIDAQ96BJ3 306 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 SEC62Q99442 399 aaKnown RBP12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 DBNDD2Q9BQY9 259 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 NPHP3Q7Z494 1330 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 BIN1O00499 593 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 TAF5LO75529 589 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 MRE11P49959 708 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 DNAJC10Q8IXB1 793 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 MICU3Q86XE3 530 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 ARHGAP45Q92619 1136 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 CNPY2Q9Y2B0 182 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 F8W031 263 aaPredicted RBP12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 RBM5P52756 815 aaKnown RBP eCLIP12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 CCDC73Q6ZRK6 1079 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 RBM8AQ9Y5S9 174 aaKnown RBP12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 GOLGA6L6A8MZA4 724 aa12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 IKQ13123 557 aaPredicted RBP12.8□□□□□ -0.36
TGFBR1-209ENST00000552516 TPD52L1Q16890 204 aaPredicted RBP12.79□□□□□ -0.36
TGFBR1-209ENST00000552516 TRMT2AQ8IZ69 625 aaKnown RBP12.79□□□□□ -0.36
TGFBR1-209ENST00000552516 STK38Q15208 465 aa12.79□□□□□ -0.36
TGFBR1-209ENST00000552516 FAM177A1Q8N128 213 aaPredicted RBP12.79□□□□□ -0.36
TGFBR1-209ENST00000552516 KIF3AQ9Y496 699 aa12.79□□□□□ -0.36
TGFBR1-209ENST00000552516 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
TGFBR1-209ENST00000552516 ANKIB1Q9P2G1 1089 aa12.79□□□□□ -0.36
TGFBR1-209ENST00000552516 CSPP1Q1MSJ5 1256 aa12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 GIMAP6Q6P9H5 292 aa12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 SPATA32Q96LK8 384 aa12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 ZKSCAN3Q9BRR0 538 aa12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 NOL10Q9BSC4 688 aaKnown RBP12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 TLR7Q9NYK1 1049 aaKnown RBP12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 SNAP23O00161 211 aa12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 RANBP6O60518 1105 aaKnown RBP12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 CHMLP26374 656 aa12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 FILIP1Q7Z7B0 1213 aa12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 FAM43AQ8N2R8 423 aa12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 PDILTQ8N807 584 aa12.78□□□□□ -0.36
TGFBR1-209ENST00000552516 PLEKHG3A1L390 1219 aa12.77□□□□□ -0.36
TGFBR1-209ENST00000552516 IL2RBP14784 551 aa12.77□□□□□ -0.36
TGFBR1-209ENST00000552516 DHX8Q14562 1220 aaKnown RBP12.77□□□□□ -0.36
TGFBR1-209ENST00000552516 TRPM2O94759 1503 aa12.77□□□□□ -0.37
TGFBR1-209ENST00000552516 NOC3LQ8WTT2 800 aaKnown RBP12.77□□□□□ -0.37
TGFBR1-209ENST00000552516 USP25Q9UHP3 1055 aa12.77□□□□□ -0.37
TGFBR1-209ENST00000552516 INSRP06213 1382 aa12.77□□□□□ -0.37
TGFBR1-209ENST00000552516 USP26Q9BXU7 913 aa12.77□□□□□ -0.37
TGFBR1-209ENST00000552516 NIP7Q9Y221 180 aaKnown RBP eCLIP12.77□□□□□ -0.37
TGFBR1-209ENST00000552516 AK2P54819 239 aa12.77□□□□□ -0.37
TGFBR1-209ENST00000552516 TSPY26PQ9H489 355 aa12.77□□□□□ -0.37
TGFBR1-209ENST00000552516 PTMSP20962 102 aa12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 IGHMBP2P38935 993 aaKnown RBP12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 OTUD7BQ6GQQ9 843 aa12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 SYNMO15061 1565 aa12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 WDR33Q9C0J8 1336 aaKnown RBP12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 LRRFIP1Q32MZ4 808 aaKnown RBP12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 SLAIN2Q9P270 581 aa12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 LINS1Q8NG48 757 aa12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 NCOA5Q9HCD5 579 aaKnown RBP12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 ASAP1Q9ULH1 1129 aa12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 SBNO1A3KN83 1393 aa12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 DNM1Q05193 864 aaKnown RBP12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 SYNE4Q8N205 404 aa12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 ZNF335Q9H4Z2 1342 aaPredicted RBP12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 KDM5AP29375 1690 aaKnown RBP12.76□□□□□ -0.37
TGFBR1-209ENST00000552516 SMC2O95347 1197 aa12.75□□□□□ -0.37
TGFBR1-209ENST00000552516 TNMDQ9H2S6 317 aa12.75□□□□□ -0.37
TGFBR1-209ENST00000552516 DDB1Q16531 1140 aa12.75□□□□□ -0.37
TGFBR1-209ENST00000552516 ERCC4Q92889 916 aaPredicted RBP12.75□□□□□ -0.37
TGFBR1-209ENST00000552516 LIMCH1Q9UPQ0 1083 aa12.75□□□□□ -0.37
TGFBR1-209ENST00000552516 ZSCAN29Q8IWY8 852 aaPredicted RBP12.75□□□□□ -0.37
TGFBR1-209ENST00000552516 NRDCO43847 1150 aa12.75□□□□□ -0.37
TGFBR1-209ENST00000552516 ZPR1O75312 459 aa12.75□□□□□ -0.37
TGFBR1-209ENST00000552516 UIMC1Q96RL1 719 aa12.75□□□□□ -0.37
TGFBR1-209ENST00000552516 TMX1Q9H3N1 280 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 ANKRD18BA2A2Z9 1011 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 CHGBP05060 677 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms