RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 GRIN3BO60391 1043 aa16.93■□□□□ 0.3
CDK4-212ENST00000552388 MYL6BP14649 208 aa16.93■□□□□ 0.3
CDK4-212ENST00000552388 PROSER3Q2NL68 480 aa16.93■□□□□ 0.3
CDK4-212ENST00000552388 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
CDK4-212ENST00000552388 CHPF2Q9P2E5 772 aa16.93■□□□□ 0.3
CDK4-212ENST00000552388 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
CDK4-212ENST00000552388 CD2APQ9Y5K6 639 aa16.93■□□□□ 0.3
CDK4-212ENST00000552388 AFDNP55196 1824 aaKnown RBP16.93■□□□□ 0.3
CDK4-212ENST00000552388 VAMP4O75379 141 aa16.92■□□□□ 0.3
CDK4-212ENST00000552388 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
CDK4-212ENST00000552388 USPL1Q5W0Q7 1092 aa16.92■□□□□ 0.3
CDK4-212ENST00000552388 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
CDK4-212ENST00000552388 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
CDK4-212ENST00000552388 BCL2L12Q9HB09 334 aa16.92■□□□□ 0.3
CDK4-212ENST00000552388 TBC1D2BQ9UPU7 963 aa16.92■□□□□ 0.3
CDK4-212ENST00000552388 ATP10DQ9P241 1426 aa16.92■□□□□ 0.3
CDK4-212ENST00000552388 KIAA1551Q9HCM1 1747 aa16.92■□□□□ 0.3
CDK4-212ENST00000552388 RGL2O15211 777 aa16.91■□□□□ 0.3
CDK4-212ENST00000552388 CAMTA2O94983 1202 aa16.91■□□□□ 0.3
CDK4-212ENST00000552388 ANXA1P04083 346 aa16.91■□□□□ 0.3
CDK4-212ENST00000552388 ARFGEF2Q9Y6D5 1785 aa16.91■□□□□ 0.3
CDK4-212ENST00000552388 KIF13BQ9NQT8 1826 aa16.91■□□□□ 0.3
CDK4-212ENST00000552388 NRXN2Q9P2S2 1712 aa16.9■□□□□ 0.3
CDK4-212ENST00000552388 FKBP8Q14318 412 aa16.9■□□□□ 0.3
CDK4-212ENST00000552388 TTLL7Q6ZT98 887 aa16.89■□□□□ 0.29
CDK4-212ENST00000552388 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
CDK4-212ENST00000552388 HYPKQ9NX55 129 aa16.89■□□□□ 0.29
CDK4-212ENST00000552388 ERVV-1B6SEH8 477 aa16.88■□□□□ 0.29
CDK4-212ENST00000552388 CLEC4GQ6UXB4 293 aa16.88■□□□□ 0.29
CDK4-212ENST00000552388 KIF6Q6ZMV9 814 aa16.88■□□□□ 0.29
CDK4-212ENST00000552388 COPS6Q7L5N1 327 aa16.88■□□□□ 0.29
CDK4-212ENST00000552388 MAP3K15Q6ZN16 1313 aa16.88■□□□□ 0.29
CDK4-212ENST00000552388 TM4SF1P30408 202 aa16.87■□□□□ 0.29
CDK4-212ENST00000552388 XAGE3Q8WTP9 111 aa16.87■□□□□ 0.29
CDK4-212ENST00000552388 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
CDK4-212ENST00000552388 ZNF652Q9Y2D9 606 aa16.87■□□□□ 0.29
CDK4-212ENST00000552388 MMP10P09238 476 aa16.86■□□□□ 0.29
CDK4-212ENST00000552388 CT47B1P0C2W7 299 aaPredicted RBP16.85■□□□□ 0.29
CDK4-212ENST00000552388 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
CDK4-212ENST00000552388 NFIXQ14938 502 aa16.85■□□□□ 0.29
CDK4-212ENST00000552388 HLFQ16534 295 aa16.85■□□□□ 0.29
CDK4-212ENST00000552388 PELP1Q8IZL8 1130 aaKnown RBP16.85■□□□□ 0.29
CDK4-212ENST00000552388 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
CDK4-212ENST00000552388 PHAXQ9H814 394 aaKnown RBP16.85■□□□□ 0.29
CDK4-212ENST00000552388 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
CDK4-212ENST00000552388 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
CDK4-212ENST00000552388 DDR1Q08345 913 aa16.84■□□□□ 0.29
CDK4-212ENST00000552388 TBC1D9BQ66K14 1250 aa16.84■□□□□ 0.29
CDK4-212ENST00000552388 GIGYF2Q6Y7W6 1299 aaKnown RBP16.84■□□□□ 0.29
CDK4-212ENST00000552388 ZBTB3Q9H5J0 574 aa16.84■□□□□ 0.29
CDK4-212ENST00000552388 POLRMTO00411 1230 aaKnown RBP16.83■□□□□ 0.28
CDK4-212ENST00000552388 ANKRD13DQ6ZTN6 518 aa16.83■□□□□ 0.28
CDK4-212ENST00000552388 PLBD2Q8NHP8 589 aa16.83■□□□□ 0.28
CDK4-212ENST00000552388 PARP3Q9Y6F1 533 aa16.83■□□□□ 0.28
CDK4-212ENST00000552388 ANKRD31Q8N7Z5 1873 aa16.82■□□□□ 0.28
CDK4-212ENST00000552388 CARMIL3Q8ND23 1372 aa16.82■□□□□ 0.28
CDK4-212ENST00000552388 BRCA1P38398 1863 aaKnown RBP16.82■□□□□ 0.28
CDK4-212ENST00000552388 PXDNLA1KZ92 1463 aa16.81■□□□□ 0.28
CDK4-212ENST00000552388 BICDL1Q6ZP65 573 aa16.81■□□□□ 0.28
CDK4-212ENST00000552388 G2E3Q7L622 706 aa16.81■□□□□ 0.28
CDK4-212ENST00000552388 SETDB2Q96T68 719 aa16.81■□□□□ 0.28
CDK4-212ENST00000552388 NIP7Q9Y221 180 aaKnown RBP eCLIP16.81■□□□□ 0.28
CDK4-212ENST00000552388 C10orf71Q711Q0 1435 aa16.8■□□□□ 0.28
CDK4-212ENST00000552388 SERPINB2P05120 415 aa16.8■□□□□ 0.28
CDK4-212ENST00000552388 FLIIQ13045 1269 aa16.8■□□□□ 0.28
CDK4-212ENST00000552388 ALDH1L2Q3SY69 923 aa16.8■□□□□ 0.28
CDK4-212ENST00000552388 HSP90AB3PQ58FF7 597 aa16.8■□□□□ 0.28
CDK4-212ENST00000552388 ZNF34Q8IZ26 560 aa16.8■□□□□ 0.28
CDK4-212ENST00000552388 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
CDK4-212ENST00000552388 DDX58O95786 925 aaKnown RBP16.79■□□□□ 0.28
CDK4-212ENST00000552388 IFFO2Q5TF58 517 aa16.79■□□□□ 0.28
CDK4-212ENST00000552388 DLEC1Q9Y238 1755 aa16.79■□□□□ 0.28
CDK4-212ENST00000552388 TCIRG1Q13488 830 aa16.78■□□□□ 0.28
CDK4-212ENST00000552388 KSR2Q6VAB6 950 aa16.78■□□□□ 0.28
CDK4-212ENST00000552388 RIC3Q7Z5B4 369 aa16.78■□□□□ 0.28
CDK4-212ENST00000552388 MRPL50Q8N5N7 158 aaKnown RBP16.78■□□□□ 0.28
CDK4-212ENST00000552388 SSH1Q8WYL5 1049 aa16.78■□□□□ 0.28
CDK4-212ENST00000552388 IBTKQ9P2D0 1353 aaPredicted RBP16.77■□□□□ 0.28
CDK4-212ENST00000552388 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.28
CDK4-212ENST00000552388 PI4KAP2A4QPH2 592 aa16.76■□□□□ 0.27
CDK4-212ENST00000552388 GPTP24298 496 aa16.76■□□□□ 0.27
CDK4-212ENST00000552388 FKBP5Q13451 457 aaPredicted RBP16.76■□□□□ 0.27
CDK4-212ENST00000552388 PARP10Q53GL7 1025 aa16.76■□□□□ 0.27
CDK4-212ENST00000552388 PRR5LQ6MZQ0 368 aa16.76■□□□□ 0.27
CDK4-212ENST00000552388 PI4KAP1Q8N8J0 262 aa16.76■□□□□ 0.27
CDK4-212ENST00000552388 ISCA1Q9BUE6 129 aa16.76■□□□□ 0.27
CDK4-212ENST00000552388 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
CDK4-212ENST00000552388 LAMB2P55268 1798 aa16.76■□□□□ 0.27
CDK4-212ENST00000552388 KIF3CO14782 793 aa16.75■□□□□ 0.27
CDK4-212ENST00000552388 HSPA6P17066 643 aa16.75■□□□□ 0.27
CDK4-212ENST00000552388 RARSP54136 660 aaKnown RBP16.75■□□□□ 0.27
CDK4-212ENST00000552388 BRPF1P55201 1214 aaPredicted RBP16.75■□□□□ 0.27
CDK4-212ENST00000552388 NBPF5PQ86XG9 351 aaPredicted RBP16.75■□□□□ 0.27
CDK4-212ENST00000552388 CNBD1Q8NA66 436 aa16.75■□□□□ 0.27
CDK4-212ENST00000552388 METTL22Q9BUU2 404 aaPredicted RBP16.75■□□□□ 0.27
CDK4-212ENST00000552388 MAP3K2Q9Y2U5 619 aa16.75■□□□□ 0.27
CDK4-212ENST00000552388 COL11A2P13942 1736 aaPredicted RBP16.75■□□□□ 0.27
CDK4-212ENST00000552388 DDX60Q8IY21 1712 aaKnown RBP16.75■□□□□ 0.27
CDK4-212ENST00000552388 TRIM28Q13263 835 aaKnown RBP16.74■□□□□ 0.27
CDK4-212ENST00000552388 SUSD4Q5VX71 490 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms