RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 HSPA1AP0DMV8 641 aaKnown RBP19.05■□□□□ 0.64
CHMP1A-210ENST00000551981 HSPA1BP0DMV9 641 aaKnown RBP19.05■□□□□ 0.64
CHMP1A-210ENST00000551981 CEMIPQ8WUJ3 1361 aa19.05■□□□□ 0.64
CHMP1A-210ENST00000551981 SLX4Q8IY92 1834 aa19.04■□□□□ 0.64
CHMP1A-210ENST00000551981 CHADLQ6NUI6 762 aa19.04■□□□□ 0.64
CHMP1A-210ENST00000551981 PRPF40BQ6NWY9 871 aaKnown RBP19.04■□□□□ 0.64
CHMP1A-210ENST00000551981 DZIP3Q86Y13 1208 aaKnown RBP19.04■□□□□ 0.64
CHMP1A-210ENST00000551981 MASTLQ96GX5 879 aa19.04■□□□□ 0.64
CHMP1A-210ENST00000551981 SRGNP10124 158 aa19.03■□□□□ 0.64
CHMP1A-210ENST00000551981 CNGB1Q14028 1251 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-210ENST00000551981 CFAP53Q96M91 514 aa19.02■□□□□ 0.64
CHMP1A-210ENST00000551981 CREBZFQ9NS37 354 aa19.02■□□□□ 0.64
CHMP1A-210ENST00000551981 ZNF652Q9Y2D9 606 aa19.02■□□□□ 0.64
CHMP1A-210ENST00000551981 IQCA1LA6NCM1 817 aa19.01■□□□□ 0.63
CHMP1A-210ENST00000551981 CLEC4GQ6UXB4 293 aa19.01■□□□□ 0.63
CHMP1A-210ENST00000551981 NBPF5PQ86XG9 351 aaPredicted RBP19.01■□□□□ 0.63
CHMP1A-210ENST00000551981 SCN4AP35499 1836 aa19■□□□□ 0.63
CHMP1A-210ENST00000551981 DDNO94850 711 aaPredicted RBP19■□□□□ 0.63
CHMP1A-210ENST00000551981 PRKAR2BP31323 418 aa19■□□□□ 0.63
CHMP1A-210ENST00000551981 KCNQ3O43525 872 aa18.99■□□□□ 0.63
CHMP1A-210ENST00000551981 CCDC93Q567U6 631 aa18.99■□□□□ 0.63
CHMP1A-210ENST00000551981 PHACTR3Q96KR7 559 aa18.99■□□□□ 0.63
CHMP1A-210ENST00000551981 SNRPA1P09661 255 aaKnown RBP18.98■□□□□ 0.63
CHMP1A-210ENST00000551981 NPR1P16066 1061 aa18.98■□□□□ 0.63
CHMP1A-210ENST00000551981 RTF1Q92541 710 aaKnown RBP18.98■□□□□ 0.63
CHMP1A-210ENST00000551981 RSPH6AQ9H0K4 717 aa18.98■□□□□ 0.63
CHMP1A-210ENST00000551981 NUDCQ9Y266 331 aa18.98■□□□□ 0.63
CHMP1A-210ENST00000551981 USP16Q9Y5T5 823 aa18.98■□□□□ 0.63
CHMP1A-210ENST00000551981 MKRN1Q9UHC7 482 aaKnown RBP18.97■□□□□ 0.63
CHMP1A-210ENST00000551981 RGL2O15211 777 aa18.96■□□□□ 0.63
CHMP1A-210ENST00000551981 POTEIP0CG38 1075 aa18.96■□□□□ 0.63
CHMP1A-210ENST00000551981 POTEJP0CG39 1038 aa18.96■□□□□ 0.63
CHMP1A-210ENST00000551981 PIP4K2AP48426 406 aaPredicted RBP18.96■□□□□ 0.63
CHMP1A-210ENST00000551981 TPTE2Q6XPS3 522 aa18.96■□□□□ 0.63
CHMP1A-210ENST00000551981 LDHDQ86WU2 507 aa18.96■□□□□ 0.63
CHMP1A-210ENST00000551981 L3MBTL3Q96JM7 780 aaPredicted RBP18.96■□□□□ 0.63
CHMP1A-210ENST00000551981 C7orf43Q8WVR3 580 aa18.95■□□□□ 0.62
CHMP1A-210ENST00000551981 FKBP4Q02790 459 aaKnown RBP eCLIP18.94■□□□□ 0.62
CHMP1A-210ENST00000551981 TAF1DQ9H5J8 278 aaPredicted RBP18.94■□□□□ 0.62
CHMP1A-210ENST00000551981 NIP7Q9Y221 180 aaKnown RBP eCLIP18.94■□□□□ 0.62
CHMP1A-210ENST00000551981 PRAMEF22A3QJZ6 481 aa18.93■□□□□ 0.62
CHMP1A-210ENST00000551981 KLRG2A4D1S0 409 aaPredicted RBP18.93■□□□□ 0.62
CHMP1A-210ENST00000551981 U2AF1L5P0DN76 240 aaPredicted RBP18.93■□□□□ 0.62
CHMP1A-210ENST00000551981 U2AF1Q01081 240 aaKnown RBP eCLIP18.93■□□□□ 0.62
CHMP1A-210ENST00000551981 MCM10Q7L590 875 aa18.93■□□□□ 0.62
CHMP1A-210ENST00000551981 RTKN2Q8IZC4 609 aa18.93■□□□□ 0.62
CHMP1A-210ENST00000551981 PASKQ96RG2 1323 aa18.93■□□□□ 0.62
CHMP1A-210ENST00000551981 CNTNAP1P78357 1384 aa18.93■□□□□ 0.62
CHMP1A-210ENST00000551981 ZNF277Q9NRM2 450 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-210ENST00000551981 HTATSF1O43719 755 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-210ENST00000551981 GTF2E1P29083 439 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-210ENST00000551981 ALDH1B1P30837 517 aa18.91■□□□□ 0.62
CHMP1A-210ENST00000551981 EAPPQ56P03 285 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-210ENST00000551981 HACL1Q9UJ83 578 aa18.91■□□□□ 0.62
CHMP1A-210ENST00000551981 LAMB4A4D0S4 1761 aa18.91■□□□□ 0.62
CHMP1A-210ENST00000551981 TMEM88BA6NKF7 163 aa18.9■□□□□ 0.62
CHMP1A-210ENST00000551981 FAM177BA6PVY3 158 aa18.9■□□□□ 0.62
CHMP1A-210ENST00000551981 NBPF26B4DH59 902 aa18.9■□□□□ 0.62
CHMP1A-210ENST00000551981 NBPF10Q6P3W6 841 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-210ENST00000551981 NBPF15Q8N660 670 aa18.9■□□□□ 0.62
CHMP1A-210ENST00000551981 AIDAQ96BJ3 306 aa18.9■□□□□ 0.62
CHMP1A-210ENST00000551981 CLEC11AQ9Y240 323 aa18.9■□□□□ 0.62
CHMP1A-210ENST00000551981 ZNF541Q9H0D2 1346 aa18.9■□□□□ 0.62
CHMP1A-210ENST00000551981 PNMA8AQ86V59 439 aaPredicted RBP18.89■□□□□ 0.61
CHMP1A-210ENST00000551981 EPHX2P34913 555 aa18.88■□□□□ 0.61
CHMP1A-210ENST00000551981 IARSP41252 1262 aaKnown RBP18.88■□□□□ 0.61
CHMP1A-210ENST00000551981 NYXQ9GZU5 481 aa18.88■□□□□ 0.61
CHMP1A-210ENST00000551981 ITGBL1O95965 494 aaPredicted RBP18.87■□□□□ 0.61
CHMP1A-210ENST00000551981 DCTN1Q14203 1278 aa18.87■□□□□ 0.61
CHMP1A-210ENST00000551981 TAF7Q15545 349 aaPredicted RBP18.87■□□□□ 0.61
CHMP1A-210ENST00000551981 OLFM4Q6UX06 510 aa18.87■□□□□ 0.61
CHMP1A-210ENST00000551981 ADAMTSL1Q8N6G6 1762 aa18.87■□□□□ 0.61
CHMP1A-210ENST00000551981 FOXN1O15353 648 aa18.86■□□□□ 0.61
CHMP1A-210ENST00000551981 PPP2R1AP30153 589 aa18.86■□□□□ 0.61
CHMP1A-210ENST00000551981 HLFQ16534 295 aa18.86■□□□□ 0.61
CHMP1A-210ENST00000551981 GPC2Q8N158 579 aa18.86■□□□□ 0.61
CHMP1A-210ENST00000551981 SYNE4Q8N205 404 aa18.86■□□□□ 0.61
CHMP1A-210ENST00000551981 JDP2Q8WYK2 163 aa18.86■□□□□ 0.61
CHMP1A-210ENST00000551981 PRDM10Q9NQV6 1147 aa18.86■□□□□ 0.61
CHMP1A-210ENST00000551981 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
CHMP1A-210ENST00000551981 FZD9O00144 591 aa18.85■□□□□ 0.61
CHMP1A-210ENST00000551981 NEFMP07197 916 aa18.85■□□□□ 0.61
CHMP1A-210ENST00000551981 CTCFP49711 727 aaPredicted RBP18.85■□□□□ 0.61
CHMP1A-210ENST00000551981 VEGFBP49765 207 aa18.85■□□□□ 0.61
CHMP1A-210ENST00000551981 PSMD1Q99460 953 aa18.85■□□□□ 0.61
CHMP1A-210ENST00000551981 NUP98P52948 1817 aa18.85■□□□□ 0.61
CHMP1A-210ENST00000551981 CRY2Q49AN0 593 aa18.84■□□□□ 0.61
CHMP1A-210ENST00000551981 CC2D2BQ6DHV5 1058 aa18.84■□□□□ 0.61
CHMP1A-210ENST00000551981 PNISRQ8TF01 805 aaKnown RBP18.84■□□□□ 0.61
CHMP1A-210ENST00000551981 ERVV-1B6SEH8 477 aa18.83■□□□□ 0.6
CHMP1A-210ENST00000551981 KIF6Q6ZMV9 814 aa18.83■□□□□ 0.6
CHMP1A-210ENST00000551981 CNTROBQ8N137 903 aa18.83■□□□□ 0.6
CHMP1A-210ENST00000551981 RPGRQ92834 1020 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-210ENST00000551981 KDM3BQ7LBC6 1761 aa18.83■□□□□ 0.6
CHMP1A-210ENST00000551981 EIF6P56537 245 aaKnown RBP18.82■□□□□ 0.6
CHMP1A-210ENST00000551981 GRIPAP1Q4V328 841 aa18.82■□□□□ 0.6
CHMP1A-210ENST00000551981 NGEFQ8N5V2 710 aa18.82■□□□□ 0.6
CHMP1A-210ENST00000551981 MIS18AQ9NYP9 233 aa18.82■□□□□ 0.6
CHMP1A-210ENST00000551981 DLG5Q8TDM6 1919 aa18.82■□□□□ 0.6
CHMP1A-210ENST00000551981 ABCC12Q96J65 1359 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms