RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 POTEJP0CG39 1038 aa29.14■■■□□ 2.26
SMARCD1-212ENST00000551966 CNKSR1Q969H4 720 aa29.14■■■□□ 2.26
SMARCD1-212ENST00000551966 TAOK3Q9H2K8 898 aa29.14■■■□□ 2.26
SMARCD1-212ENST00000551966 NPC1L1Q9UHC9 1359 aa29.13■■■□□ 2.25
SMARCD1-212ENST00000551966 BTBD11A6QL63 1104 aa29.13■■■□□ 2.25
SMARCD1-212ENST00000551966 PIP4K2AP48426 406 aaPredicted RBP29.13■■■□□ 2.25
SMARCD1-212ENST00000551966 DZIP3Q86Y13 1208 aaKnown RBP29.13■■■□□ 2.25
SMARCD1-212ENST00000551966 PRAMEF22A3QJZ6 481 aa29.12■■■□□ 2.25
SMARCD1-212ENST00000551966 PRPF40BQ6NWY9 871 aaKnown RBP29.12■■■□□ 2.25
SMARCD1-212ENST00000551966 CHADLQ6NUI6 762 aa29.11■■■□□ 2.25
SMARCD1-212ENST00000551966 MASTLQ96GX5 879 aa29.11■■■□□ 2.25
SMARCD1-212ENST00000551966 ST5P78524 1137 aa29.1■■■□□ 2.25
SMARCD1-212ENST00000551966 NPM2Q86SE8 214 aaKnown RBP29.1■■■□□ 2.25
SMARCD1-212ENST00000551966 C7orf43Q8WVR3 580 aa29.1■■■□□ 2.25
SMARCD1-212ENST00000551966 PRKAR2BP31323 418 aa29.09■■■□□ 2.25
SMARCD1-212ENST00000551966 RSPH6AQ9H0K4 717 aa29.09■■■□□ 2.25
SMARCD1-212ENST00000551966 NPHP1O15259 732 aa29.08■■■□□ 2.25
SMARCD1-212ENST00000551966 CREBZFQ9NS37 354 aa29.07■■■□□ 2.24
SMARCD1-212ENST00000551966 CLEC4GQ6UXB4 293 aa29.06■■■□□ 2.24
SMARCD1-212ENST00000551966 BCORQ6W2J9 1755 aa29.06■■■□□ 2.24
SMARCD1-212ENST00000551966 SOGA3Q5TF21 947 aa29.05■■■□□ 2.24
SMARCD1-212ENST00000551966 MKRN1Q9UHC7 482 aaKnown RBP29.05■■■□□ 2.24
SMARCD1-212ENST00000551966 CACNA1SQ13698 1873 aa29.04■■■□□ 2.24
SMARCD1-212ENST00000551966 KLRG2A4D1S0 409 aaPredicted RBP29.04■■■□□ 2.24
SMARCD1-212ENST00000551966 NBPF5PQ86XG9 351 aaPredicted RBP29.04■■■□□ 2.24
SMARCD1-212ENST00000551966 NBPF26B4DH59 902 aa29.03■■■□□ 2.24
SMARCD1-212ENST00000551966 NBPF10Q6P3W6 841 aaKnown RBP29.03■■■□□ 2.24
SMARCD1-212ENST00000551966 NBPF15Q8N660 670 aa29.03■■■□□ 2.24
SMARCD1-212ENST00000551966 SNRPA1P09661 255 aaKnown RBP29.02■■■□□ 2.24
SMARCD1-212ENST00000551966 MCM10Q7L590 875 aa29.02■■■□□ 2.24
SMARCD1-212ENST00000551966 ARFGEF2Q9Y6D5 1785 aa29.01■■■□□ 2.23
SMARCD1-212ENST00000551966 OLFM4Q6UX06 510 aa29.01■■■□□ 2.23
SMARCD1-212ENST00000551966 L3MBTL3Q96JM7 780 aaPredicted RBP29.01■■■□□ 2.23
SMARCD1-212ENST00000551966 PASKQ96RG2 1323 aa29■■■□□ 2.23
SMARCD1-212ENST00000551966 NPR1P16066 1061 aa29■■■□□ 2.23
SMARCD1-212ENST00000551966 TAF1DQ9H5J8 278 aaPredicted RBP29■■■□□ 2.23
SMARCD1-212ENST00000551966 DCTN1Q14203 1278 aa28.99■■■□□ 2.23
SMARCD1-212ENST00000551966 CCDC93Q567U6 631 aa28.99■■■□□ 2.23
SMARCD1-212ENST00000551966 TPTE2Q6XPS3 522 aa28.98■■■□□ 2.23
SMARCD1-212ENST00000551966 ZNF277Q9NRM2 450 aaPredicted RBP28.98■■■□□ 2.23
SMARCD1-212ENST00000551966 ZNF652Q9Y2D9 606 aa28.98■■■□□ 2.23
SMARCD1-212ENST00000551966 IQCA1LA6NCM1 817 aa28.97■■■□□ 2.23
SMARCD1-212ENST00000551966 ITGBL1O95965 494 aaPredicted RBP28.97■■■□□ 2.23
SMARCD1-212ENST00000551966 FKBP4Q02790 459 aaKnown RBP eCLIP28.97■■■□□ 2.23
SMARCD1-212ENST00000551966 LDHDQ86WU2 507 aa28.97■■■□□ 2.23
SMARCD1-212ENST00000551966 CFAP53Q96M91 514 aa28.97■■■□□ 2.23
SMARCD1-212ENST00000551966 NIP7Q9Y221 180 aaKnown RBP eCLIP28.97■■■□□ 2.23
SMARCD1-212ENST00000551966 ZNF541Q9H0D2 1346 aa28.96■■■□□ 2.23
SMARCD1-212ENST00000551966 HLFQ16534 295 aa28.96■■■□□ 2.23
SMARCD1-212ENST00000551966 FAM177BA6PVY3 158 aa28.95■■■□□ 2.22
SMARCD1-212ENST00000551966 U2AF1L5P0DN76 240 aaPredicted RBP28.95■■■□□ 2.22
SMARCD1-212ENST00000551966 U2AF1Q01081 240 aaKnown RBP eCLIP28.95■■■□□ 2.22
SMARCD1-212ENST00000551966 RTF1Q92541 710 aaKnown RBP28.95■■■□□ 2.22
SMARCD1-212ENST00000551966 NUDCQ9Y266 331 aa28.95■■■□□ 2.22
SMARCD1-212ENST00000551966 CNTNAP1P78357 1384 aa28.94■■■□□ 2.22
SMARCD1-212ENST00000551966 SCN4AP35499 1836 aa28.94■■■□□ 2.22
SMARCD1-212ENST00000551966 RGL2O15211 777 aa28.93■■■□□ 2.22
SMARCD1-212ENST00000551966 FOXN1O15353 648 aa28.92■■■□□ 2.22
SMARCD1-212ENST00000551966 MIS18AQ9NYP9 233 aa28.92■■■□□ 2.22
SMARCD1-212ENST00000551966 PPP2R1AP30153 589 aa28.91■■■□□ 2.22
SMARCD1-212ENST00000551966 RTKN2Q8IZC4 609 aa28.91■■■□□ 2.22
SMARCD1-212ENST00000551966 SYNE4Q8N205 404 aa28.91■■■□□ 2.22
SMARCD1-212ENST00000551966 HTATSF1O43719 755 aaKnown RBP28.9■■■□□ 2.22
SMARCD1-212ENST00000551966 TAF7Q15545 349 aaPredicted RBP28.9■■■□□ 2.22
SMARCD1-212ENST00000551966 EAPPQ56P03 285 aaPredicted RBP28.9■■■□□ 2.22
SMARCD1-212ENST00000551966 HACL1Q9UJ83 578 aa28.9■■■□□ 2.22
SMARCD1-212ENST00000551966 TMEM88BA6NKF7 163 aa28.89■■■□□ 2.22
SMARCD1-212ENST00000551966 FZD9O00144 591 aa28.89■■■□□ 2.22
SMARCD1-212ENST00000551966 ALDH1B1P30837 517 aa28.89■■■□□ 2.22
SMARCD1-212ENST00000551966 VEGFBP49765 207 aa28.89■■■□□ 2.22
SMARCD1-212ENST00000551966 EPHX2P34913 555 aa28.88■■■□□ 2.21
SMARCD1-212ENST00000551966 IARSP41252 1262 aaKnown RBP28.88■■■□□ 2.21
SMARCD1-212ENST00000551966 CLEC11AQ9Y240 323 aa28.87■■■□□ 2.21
SMARCD1-212ENST00000551966 SNED1Q8TER0 1413 aa28.86■■■□□ 2.21
SMARCD1-212ENST00000551966 GTF2E1P29083 439 aaPredicted RBP28.85■■■□□ 2.21
SMARCD1-212ENST00000551966 RNF123Q5XPI4 1314 aa28.85■■■□□ 2.21
SMARCD1-212ENST00000551966 ADAMTSL1Q8N6G6 1762 aa28.85■■■□□ 2.21
SMARCD1-212ENST00000551966 CRY2Q49AN0 593 aa28.84■■■□□ 2.21
SMARCD1-212ENST00000551966 NUTM1Q86Y26 1132 aa28.84■■■□□ 2.21
SMARCD1-212ENST00000551966 NGEFQ8N5V2 710 aa28.84■■■□□ 2.21
SMARCD1-212ENST00000551966 MAP1SQ66K74 1059 aaPredicted RBP28.83■■■□□ 2.21
SMARCD1-212ENST00000551966 CNTROBQ8N137 903 aa28.83■■■□□ 2.21
SMARCD1-212ENST00000551966 PRDM10Q9NQV6 1147 aa28.83■■■□□ 2.21
SMARCD1-212ENST00000551966 PNMA8AQ86V59 439 aaPredicted RBP28.82■■■□□ 2.2
SMARCD1-212ENST00000551966 GPC2Q8N158 579 aa28.82■■■□□ 2.2
SMARCD1-212ENST00000551966 PSMD1Q99460 953 aa28.82■■■□□ 2.2
SMARCD1-212ENST00000551966 WBP1LQ9NX94 342 aa28.82■■■□□ 2.2
SMARCD1-212ENST00000551966 ABCC12Q96J65 1359 aa28.82■■■□□ 2.2
SMARCD1-212ENST00000551966 ERVV-1B6SEH8 477 aa28.81■■■□□ 2.2
SMARCD1-212ENST00000551966 TTLL7Q6ZT98 887 aa28.8■■■□□ 2.2
SMARCD1-212ENST00000551966 CTCFP49711 727 aaPredicted RBP28.79■■■□□ 2.2
SMARCD1-212ENST00000551966 SLC51AQ86UW1 340 aa28.79■■■□□ 2.2
SMARCD1-212ENST00000551966 NYXQ9GZU5 481 aa28.79■■■□□ 2.2
SMARCD1-212ENST00000551966 COL4A5P29400 1685 aa28.79■■■□□ 2.2
SMARCD1-212ENST00000551966 MAP3K15Q6ZN16 1313 aa28.78■■■□□ 2.2
SMARCD1-212ENST00000551966 RASSF10A6NK89 507 aa28.78■■■□□ 2.2
SMARCD1-212ENST00000551966 HOXA10P31260 410 aaPredicted RBP28.78■■■□□ 2.2
SMARCD1-212ENST00000551966 DEFB115Q30KQ5 88 aa28.78■■■□□ 2.2
SMARCD1-212ENST00000551966 JDP2Q8WYK2 163 aa28.78■■■□□ 2.2
SMARCD1-212ENST00000551966 RRP7AQ9Y3A4 280 aaKnown RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms