RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 STK31Q9BXU1 1019 aa24.02■■□□□ 1.44
DDX54-209ENST00000551912 PPP1R1BQ9UD71 204 aaPredicted RBP24.02■■□□□ 1.44
DDX54-209ENST00000551912 COPS6Q7L5N1 327 aa24.01■■□□□ 1.43
DDX54-209ENST00000551912 XAGE3Q8WTP9 111 aa24.01■■□□□ 1.43
DDX54-209ENST00000551912 ZNF652Q9Y2D9 606 aa24.01■■□□□ 1.43
DDX54-209ENST00000551912 MAP3K15Q6ZN16 1313 aa24.01■■□□□ 1.43
DDX54-209ENST00000551912 ERVV-1B6SEH8 477 aa24■■□□□ 1.43
DDX54-209ENST00000551912 RGL2O15211 777 aa24■■□□□ 1.43
DDX54-209ENST00000551912 AIMP1Q12904 312 aaKnown RBP24■■□□□ 1.43
DDX54-209ENST00000551912 CLEC4GQ6UXB4 293 aa24■■□□□ 1.43
DDX54-209ENST00000551912 BCORQ6W2J9 1755 aa24■■□□□ 1.43
DDX54-209ENST00000551912 TCERG1O14776 1098 aaKnown RBP23.98■■□□□ 1.43
DDX54-209ENST00000551912 TM4SF1P30408 202 aa23.98■■□□□ 1.43
DDX54-209ENST00000551912 NFIXQ14938 502 aa23.98■■□□□ 1.43
DDX54-209ENST00000551912 ZBTB3Q9H5J0 574 aa23.98■■□□□ 1.43
DDX54-209ENST00000551912 PARP3Q9Y6F1 533 aa23.98■■□□□ 1.43
DDX54-209ENST00000551912 HLFQ16534 295 aa23.97■■□□□ 1.43
DDX54-209ENST00000551912 TBC1D9BQ66K14 1250 aa23.97■■□□□ 1.43
DDX54-209ENST00000551912 BICDL1Q6ZP65 573 aa23.96■■□□□ 1.43
DDX54-209ENST00000551912 SLC4A2P04920 1241 aa23.95■■□□□ 1.42
DDX54-209ENST00000551912 DDR1Q08345 913 aa23.95■■□□□ 1.42
DDX54-209ENST00000551912 PHAXQ9H814 394 aaKnown RBP23.95■■□□□ 1.42
DDX54-209ENST00000551912 POLRMTO00411 1230 aaKnown RBP23.94■■□□□ 1.42
DDX54-209ENST00000551912 SETDB2Q96T68 719 aa23.94■■□□□ 1.42
DDX54-209ENST00000551912 CT47B1P0C2W7 299 aaPredicted RBP23.93■■□□□ 1.42
DDX54-209ENST00000551912 GIGYF2Q6Y7W6 1299 aaKnown RBP23.93■■□□□ 1.42
DDX54-209ENST00000551912 ANKRD13DQ6ZTN6 518 aa23.93■■□□□ 1.42
DDX54-209ENST00000551912 PLBD2Q8NHP8 589 aa23.93■■□□□ 1.42
DDX54-209ENST00000551912 ZNF428Q96B54 188 aa23.93■■□□□ 1.42
DDX54-209ENST00000551912 CARMIL3Q8ND23 1372 aa23.92■■□□□ 1.42
DDX54-209ENST00000551912 NIP7Q9Y221 180 aaKnown RBP eCLIP23.92■■□□□ 1.42
DDX54-209ENST00000551912 NUP98P52948 1817 aa23.91■■□□□ 1.42
DDX54-209ENST00000551912 CACNA1FO60840 1977 aa23.91■■□□□ 1.42
DDX54-209ENST00000551912 DDX58O95786 925 aaKnown RBP23.91■■□□□ 1.42
DDX54-209ENST00000551912 KLHL34Q8N239 644 aa23.91■■□□□ 1.42
DDX54-209ENST00000551912 FHDC1Q9C0D6 1143 aaPredicted RBP23.91■■□□□ 1.42
DDX54-209ENST00000551912 ATP10DQ9P241 1426 aa23.91■■□□□ 1.42
DDX54-209ENST00000551912 SERPINB2P05120 415 aa23.9■■□□□ 1.42
DDX54-209ENST00000551912 HSP90AB3PQ58FF7 597 aa23.9■■□□□ 1.42
DDX54-209ENST00000551912 RIC3Q7Z5B4 369 aa23.9■■□□□ 1.42
DDX54-209ENST00000551912 G2E3Q7L622 706 aa23.89■■□□□ 1.41
DDX54-209ENST00000551912 FLIIQ13045 1269 aa23.88■■□□□ 1.41
DDX54-209ENST00000551912 CD2APQ9Y5K6 639 aa23.88■■□□□ 1.41
DDX54-209ENST00000551912 GPTP24298 496 aa23.87■■□□□ 1.41
DDX54-209ENST00000551912 TCIRG1Q13488 830 aa23.87■■□□□ 1.41
DDX54-209ENST00000551912 ZNF34Q8IZ26 560 aa23.87■■□□□ 1.41
DDX54-209ENST00000551912 ALDH1L2Q3SY69 923 aa23.86■■□□□ 1.41
DDX54-209ENST00000551912 NBPF5PQ86XG9 351 aaPredicted RBP23.86■■□□□ 1.41
DDX54-209ENST00000551912 SSH1Q8WYL5 1049 aa23.86■■□□□ 1.41
DDX54-209ENST00000551912 SYT17Q9BSW7 474 aa23.86■■□□□ 1.41
DDX54-209ENST00000551912 AFDNP55196 1824 aaKnown RBP23.86■■□□□ 1.41
DDX54-209ENST00000551912 C10orf71Q711Q0 1435 aa23.85■■□□□ 1.41
DDX54-209ENST00000551912 NRXN2Q9P2S2 1712 aa23.85■■□□□ 1.41
DDX54-209ENST00000551912 NPHP1O15259 732 aa23.85■■□□□ 1.41
DDX54-209ENST00000551912 FKBP5Q13451 457 aaPredicted RBP23.85■■□□□ 1.41
DDX54-209ENST00000551912 KSR2Q6VAB6 950 aa23.85■■□□□ 1.41
DDX54-209ENST00000551912 CNBD1Q8NA66 436 aa23.85■■□□□ 1.41
DDX54-209ENST00000551912 YTHDC1Q96MU7 727 aaKnown RBP23.85■■□□□ 1.41
DDX54-209ENST00000551912 UBN2Q6ZU65 1347 aa23.84■■□□□ 1.41
DDX54-209ENST00000551912 ARFGEF2Q9Y6D5 1785 aa23.84■■□□□ 1.41
DDX54-209ENST00000551912 PI4KAP2A4QPH2 592 aa23.84■■□□□ 1.41
DDX54-209ENST00000551912 PARP10Q53GL7 1025 aa23.84■■□□□ 1.41
DDX54-209ENST00000551912 MRPL50Q8N5N7 158 aaKnown RBP23.84■■□□□ 1.41
DDX54-209ENST00000551912 PI4KAP1Q8N8J0 262 aa23.84■■□□□ 1.41
DDX54-209ENST00000551912 MAP3K2Q9Y2U5 619 aa23.84■■□□□ 1.41
DDX54-209ENST00000551912 FAM177BA6PVY3 158 aa23.83■■□□□ 1.41
DDX54-209ENST00000551912 TPTE2Q6XPS3 522 aa23.83■■□□□ 1.41
DDX54-209ENST00000551912 BCL2L13Q9BXK5 485 aa23.83■■□□□ 1.41
DDX54-209ENST00000551912 SMC4Q9NTJ3 1288 aa23.83■■□□□ 1.41
DDX54-209ENST00000551912 ANKRD36CQ5JPF3 1778 aa23.83■■□□□ 1.4
DDX54-209ENST00000551912 ADCY9O60503 1353 aa23.82■■□□□ 1.4
DDX54-209ENST00000551912 PRR5LQ6MZQ0 368 aa23.82■■□□□ 1.4
DDX54-209ENST00000551912 NYXQ9GZU5 481 aa23.82■■□□□ 1.4
DDX54-209ENST00000551912 ST5P78524 1137 aa23.81■■□□□ 1.4
DDX54-209ENST00000551912 SUSD4Q5VX71 490 aa23.81■■□□□ 1.4
DDX54-209ENST00000551912 PPP1R42Q7Z4L9 355 aa23.81■■□□□ 1.4
DDX54-209ENST00000551912 MYD88Q99836 296 aa23.81■■□□□ 1.4
DDX54-209ENST00000551912 ISCA1Q9BUE6 129 aa23.81■■□□□ 1.4
DDX54-209ENST00000551912 METTL22Q9BUU2 404 aaPredicted RBP23.81■■□□□ 1.4
DDX54-209ENST00000551912 IBTKQ9P2D0 1353 aaPredicted RBP23.8■■□□□ 1.4
DDX54-209ENST00000551912 KIF13BQ9NQT8 1826 aa23.8■■□□□ 1.4
DDX54-209ENST00000551912 ATP5J2-PTCD1G3V325 749 aa23.8■■□□□ 1.4
DDX54-209ENST00000551912 GTF2E1P29083 439 aaPredicted RBP23.8■■□□□ 1.4
DDX54-209ENST00000551912 RARSP54136 660 aaKnown RBP23.8■■□□□ 1.4
DDX54-209ENST00000551912 NLRP10Q86W26 655 aa23.8■■□□□ 1.4
DDX54-209ENST00000551912 NLGN2Q8NFZ4 835 aa23.8■■□□□ 1.4
DDX54-209ENST00000551912 TGFB2P61812 414 aa23.79■■□□□ 1.4
DDX54-209ENST00000551912 CCDC24Q8N4L8 307 aa23.79■■□□□ 1.4
DDX54-209ENST00000551912 UTP14AQ9BVJ6 771 aaKnown RBP23.79■■□□□ 1.4
DDX54-209ENST00000551912 NEXNQ0ZGT2 675 aa23.78■■□□□ 1.4
DDX54-209ENST00000551912 TRIM28Q13263 835 aaKnown RBP23.78■■□□□ 1.4
DDX54-209ENST00000551912 DNAAF4Q8WXU2 420 aa23.78■■□□□ 1.4
DDX54-209ENST00000551912 BRIP1Q9BX63 1249 aa23.78■■□□□ 1.4
DDX54-209ENST00000551912 PTPRCP08575 1304 aa23.78■■□□□ 1.4
DDX54-209ENST00000551912 NTSR2O95665 410 aa23.77■■□□□ 1.4
DDX54-209ENST00000551912 BRPF1P55201 1214 aaPredicted RBP23.76■■□□□ 1.39
DDX54-209ENST00000551912 NUTM1Q86Y26 1132 aa23.76■■□□□ 1.39
DDX54-209ENST00000551912 TRMT112Q9UI30 125 aaKnown RBP23.76■■□□□ 1.39
DDX54-209ENST00000551912 RNF123Q5XPI4 1314 aa23.76■■□□□ 1.39
DDX54-209ENST00000551912 F6X3S4 739 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms