RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 BEGAINQ9BUH8 593 aa20.8■□□□□ 0.92
CACNB3-220ENST00000551716 TBC1D2BQ9UPU7 963 aa20.8■□□□□ 0.92
CACNB3-220ENST00000551716 WDR33Q9C0J8 1336 aaKnown RBP20.79■□□□□ 0.92
CACNB3-220ENST00000551716 RGS19P49795 217 aa20.79■□□□□ 0.92
CACNB3-220ENST00000551716 CCDC24Q8N4L8 307 aa20.79■□□□□ 0.92
CACNB3-220ENST00000551716 TIMELESSQ9UNS1 1208 aa20.79■□□□□ 0.92
CACNB3-220ENST00000551716 MRC1P22897 1456 aa20.79■□□□□ 0.92
CACNB3-220ENST00000551716 RTKN2Q8IZC4 609 aa20.78■□□□□ 0.92
CACNB3-220ENST00000551716 C7orf43Q8WVR3 580 aa20.78■□□□□ 0.92
CACNB3-220ENST00000551716 ZNF330Q9Y3S2 320 aaPredicted RBP20.78■□□□□ 0.92
CACNB3-220ENST00000551716 SCN4AP35499 1836 aa20.77■□□□□ 0.92
CACNB3-220ENST00000551716 FKBP4Q02790 459 aaKnown RBP eCLIP20.77■□□□□ 0.92
CACNB3-220ENST00000551716 ABT1Q9ULW3 272 aaKnown RBP20.77■□□□□ 0.92
CACNB3-220ENST00000551716 CCDC85CA6NKD9 419 aa20.76■□□□□ 0.91
CACNB3-220ENST00000551716 NPR1P16066 1061 aa20.76■□□□□ 0.91
CACNB3-220ENST00000551716 ECE1P42892 770 aa20.76■□□□□ 0.91
CACNB3-220ENST00000551716 MTHFSDQ2M296 383 aaKnown RBP20.76■□□□□ 0.91
CACNB3-220ENST00000551716 MAP1SQ66K74 1059 aaPredicted RBP20.74■□□□□ 0.91
CACNB3-220ENST00000551716 ZNF790Q6PG37 636 aa20.74■□□□□ 0.91
CACNB3-220ENST00000551716 GPC2Q8N158 579 aa20.74■□□□□ 0.91
CACNB3-220ENST00000551716 ZNF496Q96IT1 587 aaPredicted RBP20.74■□□□□ 0.91
CACNB3-220ENST00000551716 KNSTRNQ9Y448 316 aa20.74■□□□□ 0.91
CACNB3-220ENST00000551716 HEG1Q9ULI3 1381 aa20.73■□□□□ 0.91
CACNB3-220ENST00000551716 CAMTA2O94983 1202 aa20.73■□□□□ 0.91
CACNB3-220ENST00000551716 HMOX1P09601 288 aa20.73■□□□□ 0.91
CACNB3-220ENST00000551716 TEFQ10587 303 aa20.73■□□□□ 0.91
CACNB3-220ENST00000551716 CLEC4GQ6UXB4 293 aa20.73■□□□□ 0.91
CACNB3-220ENST00000551716 NBPF5PQ86XG9 351 aaPredicted RBP20.73■□□□□ 0.91
CACNB3-220ENST00000551716 ZNF277Q9NRM2 450 aaPredicted RBP20.73■□□□□ 0.91
CACNB3-220ENST00000551716 FZD9O00144 591 aa20.72■□□□□ 0.91
CACNB3-220ENST00000551716 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
CACNB3-220ENST00000551716 DDX21Q9NR30 783 aaKnown RBP eCLIP20.72■□□□□ 0.91
CACNB3-220ENST00000551716 ANKRD31Q8N7Z5 1873 aa20.72■□□□□ 0.91
CACNB3-220ENST00000551716 ZNF541Q9H0D2 1346 aa20.72■□□□□ 0.91
CACNB3-220ENST00000551716 KLRG2A4D1S0 409 aaPredicted RBP20.71■□□□□ 0.91
CACNB3-220ENST00000551716 ALDH1B1P30837 517 aa20.71■□□□□ 0.91
CACNB3-220ENST00000551716 TPTE2Q6XPS3 522 aa20.71■□□□□ 0.91
CACNB3-220ENST00000551716 JDP2Q8WYK2 163 aa20.71■□□□□ 0.91
CACNB3-220ENST00000551716 ZNF652Q9Y2D9 606 aa20.71■□□□□ 0.91
CACNB3-220ENST00000551716 VIRMAQ69YN4 1812 aaKnown RBP20.7■□□□□ 0.9
CACNB3-220ENST00000551716 SLX4Q8IY92 1834 aa20.7■□□□□ 0.9
CACNB3-220ENST00000551716 A1BGP04217 495 aa20.7■□□□□ 0.9
CACNB3-220ENST00000551716 DZIP3Q86Y13 1208 aaKnown RBP20.7■□□□□ 0.9
CACNB3-220ENST00000551716 CAPNS2Q96L46 248 aa20.7■□□□□ 0.9
CACNB3-220ENST00000551716 GPR101Q96P66 508 aaPredicted RBP20.7■□□□□ 0.9
CACNB3-220ENST00000551716 RNF123Q5XPI4 1314 aa20.7■□□□□ 0.9
CACNB3-220ENST00000551716 IARSP41252 1262 aaKnown RBP20.69■□□□□ 0.9
CACNB3-220ENST00000551716 LMOD1P29536 600 aaPredicted RBP20.68■□□□□ 0.9
CACNB3-220ENST00000551716 MAP2K2P36507 400 aa20.68■□□□□ 0.9
CACNB3-220ENST00000551716 PAXIP1Q6ZW49 1069 aaPredicted RBP20.68■□□□□ 0.9
CACNB3-220ENST00000551716 SYNE4Q8N205 404 aa20.68■□□□□ 0.9
CACNB3-220ENST00000551716 COL11A2P13942 1736 aaPredicted RBP20.67■□□□□ 0.9
CACNB3-220ENST00000551716 GNAT3A8MTJ3 354 aa20.67■□□□□ 0.9
CACNB3-220ENST00000551716 RGL2O15211 777 aa20.67■□□□□ 0.9
CACNB3-220ENST00000551716 CA12O43570 354 aa20.67■□□□□ 0.9
CACNB3-220ENST00000551716 DIAPH1O60610 1272 aaKnown RBP20.67■□□□□ 0.9
CACNB3-220ENST00000551716 EIF6P56537 245 aaKnown RBP20.67■□□□□ 0.9
CACNB3-220ENST00000551716 EIF4G2P78344 907 aaKnown RBP eCLIP20.67■□□□□ 0.9
CACNB3-220ENST00000551716 CC2D2BQ6DHV5 1058 aa20.66■□□□□ 0.9
CACNB3-220ENST00000551716 GRIPAP1Q4V328 841 aa20.65■□□□□ 0.9
CACNB3-220ENST00000551716 IL17REQ8NFR9 667 aa20.65■□□□□ 0.9
CACNB3-220ENST00000551716 GAS2L2Q8NHY3 880 aa20.65■□□□□ 0.9
CACNB3-220ENST00000551716 PSMD1Q99460 953 aa20.65■□□□□ 0.9
CACNB3-220ENST00000551716 UBR2Q8IWV8 1755 aa20.64■□□□□ 0.9
CACNB3-220ENST00000551716 SCN7AQ01118 1682 aa20.64■□□□□ 0.89
CACNB3-220ENST00000551716 USP50Q70EL3 339 aaPredicted RBP20.63■□□□□ 0.89
CACNB3-220ENST00000551716 ADAMTSL1Q8N6G6 1762 aa20.63■□□□□ 0.89
CACNB3-220ENST00000551716 GTF2E1P29083 439 aaPredicted RBP20.62■□□□□ 0.89
CACNB3-220ENST00000551716 GRM1Q13255 1194 aa20.62■□□□□ 0.89
CACNB3-220ENST00000551716 CYP4F22Q6NT55 531 aa20.62■□□□□ 0.89
CACNB3-220ENST00000551716 NIP7Q9Y221 180 aaKnown RBP eCLIP20.62■□□□□ 0.89
CACNB3-220ENST00000551716 GJA3Q9Y6H8 435 aa20.62■□□□□ 0.89
CACNB3-220ENST00000551716 TLL2Q9Y6L7 1015 aa20.62■□□□□ 0.89
CACNB3-220ENST00000551716 BTBD11A6QL63 1104 aa20.61■□□□□ 0.89
CACNB3-220ENST00000551716 OLFM4Q6UX06 510 aa20.61■□□□□ 0.89
CACNB3-220ENST00000551716 CFAP44Q96MT7 982 aa20.61■□□□□ 0.89
CACNB3-220ENST00000551716 ARFGEF2Q9Y6D5 1785 aa20.61■□□□□ 0.89
CACNB3-220ENST00000551716 AMER1Q5JTC6 1135 aaPredicted RBP20.6■□□□□ 0.89
CACNB3-220ENST00000551716 CST9Q5W186 159 aa20.6■□□□□ 0.89
CACNB3-220ENST00000551716 USP16Q9Y5T5 823 aa20.59■□□□□ 0.89
CACNB3-220ENST00000551716 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
CACNB3-220ENST00000551716 HSPA5P11021 654 aaKnown RBP20.58■□□□□ 0.89
CACNB3-220ENST00000551716 HHIPL1Q96JK4 782 aa20.58■□□□□ 0.89
CACNB3-220ENST00000551716 MCOLN1Q9GZU1 580 aa20.58■□□□□ 0.89
CACNB3-220ENST00000551716 EPS15P42566 896 aa20.57■□□□□ 0.88
CACNB3-220ENST00000551716 SCNN1DP51172 638 aa20.57■□□□□ 0.88
CACNB3-220ENST00000551716 BRPF1P55201 1214 aaPredicted RBP20.56■□□□□ 0.88
CACNB3-220ENST00000551716 LARGE2Q8N3Y3 721 aa20.56■□□□□ 0.88
CACNB3-220ENST00000551716 NYXQ9GZU5 481 aa20.56■□□□□ 0.88
CACNB3-220ENST00000551716 CRY2Q49AN0 593 aa20.55■□□□□ 0.88
CACNB3-220ENST00000551716 SAPCD2Q86UD0 394 aa20.55■□□□□ 0.88
CACNB3-220ENST00000551716 TSKSQ9UJT2 592 aa20.55■□□□□ 0.88
CACNB3-220ENST00000551716 CEMIPQ8WUJ3 1361 aa20.55■□□□□ 0.88
CACNB3-220ENST00000551716 THSD7BQ9C0I4 1608 aa20.54■□□□□ 0.88
CACNB3-220ENST00000551716 FAM177BA6PVY3 158 aa20.54■□□□□ 0.88
CACNB3-220ENST00000551716 TRAF5O00463 557 aa20.54■□□□□ 0.88
CACNB3-220ENST00000551716 U2SURPO15042 1029 aaKnown RBP20.54■□□□□ 0.88
CACNB3-220ENST00000551716 KCNQ3O43525 872 aa20.54■□□□□ 0.88
CACNB3-220ENST00000551716 AOC2O75106 756 aa20.54■□□□□ 0.88
CACNB3-220ENST00000551716 FMR1Q06787 632 aaKnown RBP eCLIP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms