RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 COL24A1Q17RW2 1714 aa24.15■■□□□ 1.46
CTDSP2-207ENST00000551594 SCN7AQ01118 1682 aa24.15■■□□□ 1.46
CTDSP2-207ENST00000551594 SLC4A2P04920 1241 aa24.14■■□□□ 1.45
CTDSP2-207ENST00000551594 KIF6Q6ZMV9 814 aa24.14■■□□□ 1.45
CTDSP2-207ENST00000551594 SRCAPQ6ZRS2 3230 aa24.14■■□□□ 1.45
CTDSP2-207ENST00000551594 NLGN1Q8N2Q7 840 aa24.14■■□□□ 1.45
CTDSP2-207ENST00000551594 SGIP1Q9BQI5 828 aa24.14■■□□□ 1.45
CTDSP2-207ENST00000551594 ZBTB3Q9H5J0 574 aa24.14■■□□□ 1.45
CTDSP2-207ENST00000551594 G2E3Q7L622 706 aa24.13■■□□□ 1.45
CTDSP2-207ENST00000551594 MAP3K15Q6ZN16 1313 aa24.12■■□□□ 1.45
CTDSP2-207ENST00000551594 BICDL1Q6ZP65 573 aa24.12■■□□□ 1.45
CTDSP2-207ENST00000551594 NUP98P52948 1817 aa24.12■■□□□ 1.45
CTDSP2-207ENST00000551594 MMP10P09238 476 aa24.11■■□□□ 1.45
CTDSP2-207ENST00000551594 TBC1D9BQ66K14 1250 aa24.11■■□□□ 1.45
CTDSP2-207ENST00000551594 CACNA1FO60840 1977 aa24.11■■□□□ 1.45
CTDSP2-207ENST00000551594 POLD1P28340 1107 aa24.1■■□□□ 1.45
CTDSP2-207ENST00000551594 TM4SF1P30408 202 aa24.1■■□□□ 1.45
CTDSP2-207ENST00000551594 NFIXQ14938 502 aa24.1■■□□□ 1.45
CTDSP2-207ENST00000551594 ERVV-1B6SEH8 477 aa24.09■■□□□ 1.45
CTDSP2-207ENST00000551594 DDR1Q08345 913 aa24.09■■□□□ 1.45
CTDSP2-207ENST00000551594 SSH1Q8WYL5 1049 aa24.09■■□□□ 1.45
CTDSP2-207ENST00000551594 ANKRD13DQ6ZTN6 518 aa24.08■■□□□ 1.45
CTDSP2-207ENST00000551594 BCL2L13Q9BXK5 485 aa24.08■■□□□ 1.45
CTDSP2-207ENST00000551594 ZNF652Q9Y2D9 606 aa24.08■■□□□ 1.45
CTDSP2-207ENST00000551594 CLEC4GQ6UXB4 293 aa24.07■■□□□ 1.44
CTDSP2-207ENST00000551594 CT47B1P0C2W7 299 aaPredicted RBP24.06■■□□□ 1.44
CTDSP2-207ENST00000551594 GIGYF2Q6Y7W6 1299 aaKnown RBP24.06■■□□□ 1.44
CTDSP2-207ENST00000551594 MRPL50Q8N5N7 158 aaKnown RBP24.06■■□□□ 1.44
CTDSP2-207ENST00000551594 PLBD2Q8NHP8 589 aa24.06■■□□□ 1.44
CTDSP2-207ENST00000551594 LRP5O75197 1615 aa24.06■■□□□ 1.44
CTDSP2-207ENST00000551594 POLRMTO00411 1230 aaKnown RBP24.05■■□□□ 1.44
CTDSP2-207ENST00000551594 FLIIQ13045 1269 aa24.05■■□□□ 1.44
CTDSP2-207ENST00000551594 PARP3Q9Y6F1 533 aa24.05■■□□□ 1.44
CTDSP2-207ENST00000551594 GPTP24298 496 aa24.04■■□□□ 1.44
CTDSP2-207ENST00000551594 RIC3Q7Z5B4 369 aa24.04■■□□□ 1.44
CTDSP2-207ENST00000551594 ZNF428Q96B54 188 aa24.04■■□□□ 1.44
CTDSP2-207ENST00000551594 SETDB2Q96T68 719 aa24.04■■□□□ 1.44
CTDSP2-207ENST00000551594 PPP1R1BQ9UD71 204 aaPredicted RBP24.04■■□□□ 1.44
CTDSP2-207ENST00000551594 NIP7Q9Y221 180 aaKnown RBP eCLIP24.04■■□□□ 1.44
CTDSP2-207ENST00000551594 ARFGEF2Q9Y6D5 1785 aa24.03■■□□□ 1.44
CTDSP2-207ENST00000551594 AFDNP55196 1824 aaKnown RBP24.03■■□□□ 1.44
CTDSP2-207ENST00000551594 RGL2O15211 777 aa24.03■■□□□ 1.44
CTDSP2-207ENST00000551594 RARSP54136 660 aaKnown RBP24.03■■□□□ 1.44
CTDSP2-207ENST00000551594 ALDH1L2Q3SY69 923 aa24.03■■□□□ 1.44
CTDSP2-207ENST00000551594 FAM177BA6PVY3 158 aa24.02■■□□□ 1.44
CTDSP2-207ENST00000551594 DDX58O95786 925 aaKnown RBP24.02■■□□□ 1.44
CTDSP2-207ENST00000551594 SERPINB2P05120 415 aa24.02■■□□□ 1.44
CTDSP2-207ENST00000551594 SMC4Q9NTJ3 1288 aa24.02■■□□□ 1.44
CTDSP2-207ENST00000551594 MAP3K2Q9Y2U5 619 aa24.02■■□□□ 1.44
CTDSP2-207ENST00000551594 PI4KAP2A4QPH2 592 aa24.01■■□□□ 1.43
CTDSP2-207ENST00000551594 FKBP5Q13451 457 aaPredicted RBP24.01■■□□□ 1.43
CTDSP2-207ENST00000551594 TCIRG1Q13488 830 aa24.01■■□□□ 1.43
CTDSP2-207ENST00000551594 KSR2Q6VAB6 950 aa24.01■■□□□ 1.43
CTDSP2-207ENST00000551594 ZNF34Q8IZ26 560 aa24.01■■□□□ 1.43
CTDSP2-207ENST00000551594 PI4KAP1Q8N8J0 262 aa24.01■■□□□ 1.43
CTDSP2-207ENST00000551594 ADCY9O60503 1353 aa24.01■■□□□ 1.43
CTDSP2-207ENST00000551594 KLHL34Q8N239 644 aa24■■□□□ 1.43
CTDSP2-207ENST00000551594 UBN2Q6ZU65 1347 aa24■■□□□ 1.43
CTDSP2-207ENST00000551594 ANKRD36CQ5JPF3 1778 aa24■■□□□ 1.43
CTDSP2-207ENST00000551594 ATP10DQ9P241 1426 aa24■■□□□ 1.43
CTDSP2-207ENST00000551594 ATP5J2-PTCD1G3V325 749 aa23.99■■□□□ 1.43
CTDSP2-207ENST00000551594 CCDC24Q8N4L8 307 aa23.99■■□□□ 1.43
CTDSP2-207ENST00000551594 MYD88Q99836 296 aa23.99■■□□□ 1.43
CTDSP2-207ENST00000551594 CARMIL3Q8ND23 1372 aa23.99■■□□□ 1.43
CTDSP2-207ENST00000551594 HSP90AB3PQ58FF7 597 aa23.98■■□□□ 1.43
CTDSP2-207ENST00000551594 F6X3S4 739 aa23.97■■□□□ 1.43
CTDSP2-207ENST00000551594 BCAR3O75815 825 aa23.97■■□□□ 1.43
CTDSP2-207ENST00000551594 SUSD4Q5VX71 490 aa23.97■■□□□ 1.43
CTDSP2-207ENST00000551594 NBPF5PQ86XG9 351 aaPredicted RBP23.97■■□□□ 1.43
CTDSP2-207ENST00000551594 METTL22Q9BUU2 404 aaPredicted RBP23.97■■□□□ 1.43
CTDSP2-207ENST00000551594 NRXN2Q9P2S2 1712 aa23.97■■□□□ 1.43
CTDSP2-207ENST00000551594 NLRP10Q86W26 655 aa23.96■■□□□ 1.43
CTDSP2-207ENST00000551594 ISCA1Q9BUE6 129 aa23.96■■□□□ 1.43
CTDSP2-207ENST00000551594 FHDC1Q9C0D6 1143 aaPredicted RBP23.96■■□□□ 1.43
CTDSP2-207ENST00000551594 PRR5LQ6MZQ0 368 aa23.95■■□□□ 1.42
CTDSP2-207ENST00000551594 NOB1Q9ULX3 412 aaKnown RBP23.95■■□□□ 1.42
CTDSP2-207ENST00000551594 DNAAF4Q8WXU2 420 aa23.94■■□□□ 1.42
CTDSP2-207ENST00000551594 NPHP1O15259 732 aa23.93■■□□□ 1.42
CTDSP2-207ENST00000551594 PARP10Q53GL7 1025 aa23.93■■□□□ 1.42
CTDSP2-207ENST00000551594 NUTM1Q86Y26 1132 aa23.93■■□□□ 1.42
CTDSP2-207ENST00000551594 CNBD1Q8NA66 436 aa23.93■■□□□ 1.42
CTDSP2-207ENST00000551594 IGKV5-2P06315 115 aa23.92■■□□□ 1.42
CTDSP2-207ENST00000551594 BRPF1P55201 1214 aaPredicted RBP23.92■■□□□ 1.42
CTDSP2-207ENST00000551594 TPTE2Q6XPS3 522 aa23.92■■□□□ 1.42
CTDSP2-207ENST00000551594 C10orf71Q711Q0 1435 aa23.92■■□□□ 1.42
CTDSP2-207ENST00000551594 PTPRCP08575 1304 aa23.91■■□□□ 1.42
CTDSP2-207ENST00000551594 NTSR2O95665 410 aa23.91■■□□□ 1.42
CTDSP2-207ENST00000551594 TRIM28Q13263 835 aaKnown RBP23.91■■□□□ 1.42
CTDSP2-207ENST00000551594 CWF19L2Q2TBE0 894 aaKnown RBP23.91■■□□□ 1.42
CTDSP2-207ENST00000551594 NLGN2Q8NFZ4 835 aa23.91■■□□□ 1.42
CTDSP2-207ENST00000551594 SYT17Q9BSW7 474 aa23.91■■□□□ 1.42
CTDSP2-207ENST00000551594 CD2APQ9Y5K6 639 aa23.91■■□□□ 1.42
CTDSP2-207ENST00000551594 KIF13BQ9NQT8 1826 aa23.91■■□□□ 1.42
CTDSP2-207ENST00000551594 GTF2E1P29083 439 aaPredicted RBP23.9■■□□□ 1.42
CTDSP2-207ENST00000551594 NEXNQ0ZGT2 675 aa23.9■■□□□ 1.42
CTDSP2-207ENST00000551594 ERFEQ4G0M1 354 aa23.9■■□□□ 1.42
CTDSP2-207ENST00000551594 SLC4A10Q6U841 1118 aa23.9■■□□□ 1.42
CTDSP2-207ENST00000551594 PPP1R42Q7Z4L9 355 aa23.9■■□□□ 1.42
CTDSP2-207ENST00000551594 SYNE4Q8N205 404 aa23.9■■□□□ 1.42
CTDSP2-207ENST00000551594 UTP14AQ9BVJ6 771 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms