RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	CHL1	O00533	1208 aa		11.76	□□□□□ -0.53
ATXN2-223	ENST00000551551	DPEP1	P16444	411 aa		11.76	□□□□□ -0.53
ATXN2-223	ENST00000551551	ALDH1B1	P30837	517 aa		11.76	□□□□□ -0.53
ATXN2-223	ENST00000551551	GNAI1	P63096	354 aa		11.76	□□□□□ -0.53
ATXN2-223	ENST00000551551	ARHGAP27	Q6ZUM4	889 aa		11.76	□□□□□ -0.53
ATXN2-223	ENST00000551551	SMIM5	Q71RC9	77 aa		11.76	□□□□□ -0.53
ATXN2-223	ENST00000551551	MYH14	Q7Z406	1995 aa	Known RBP	11.76	□□□□□ -0.53
ATXN2-223	ENST00000551551	UBR2	Q8IWV8	1755 aa		11.75	□□□□□ -0.53
ATXN2-223	ENST00000551551	KCNQ3	O43525	872 aa		11.75	□□□□□ -0.53
ATXN2-223	ENST00000551551	CAMTA2	O94983	1202 aa		11.75	□□□□□ -0.53
ATXN2-223	ENST00000551551	DDR1	Q08345	913 aa		11.75	□□□□□ -0.53
ATXN2-223	ENST00000551551	PPP1R42	Q7Z4L9	355 aa		11.75	□□□□□ -0.53
ATXN2-223	ENST00000551551	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.75	□□□□□ -0.53
ATXN2-223	ENST00000551551	TMX4	Q9H1E5	349 aa	Predicted RBP	11.75	□□□□□ -0.53
ATXN2-223	ENST00000551551	C4A	P0C0L4	1744 aa		11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	KCNA3	P22001	575 aa		11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	CCDC27	Q2M243	656 aa		11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	PARP10	Q53GL7	1025 aa		11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	TBC1D9B	Q66K14	1250 aa		11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	STYK1	Q6J9G0	422 aa		11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	MASTL	Q96GX5	879 aa		11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	BCL2L12	Q9HB09	334 aa		11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	RNF123	Q5XPI4	1314 aa		11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	TJP1	Q07157	1748 aa		11.74	□□□□□ -0.53
ATXN2-223	ENST00000551551	SIPA1L3	O60292	1781 aa	Predicted RBP	11.73	□□□□□ -0.53
ATXN2-223	ENST00000551551	NEUROD2	Q15784	382 aa		11.73	□□□□□ -0.53
ATXN2-223	ENST00000551551	CC2D2B	Q6DHV5	1058 aa		11.73	□□□□□ -0.53
ATXN2-223	ENST00000551551	BICDL1	Q6ZP65	573 aa		11.73	□□□□□ -0.53
ATXN2-223	ENST00000551551	C2CD5	Q86YS7	1000 aa		11.73	□□□□□ -0.53
ATXN2-223	ENST00000551551	IFT57	Q9NWB7	429 aa		11.73	□□□□□ -0.53
ATXN2-223	ENST00000551551	MIS18A	Q9NYP9	233 aa		11.73	□□□□□ -0.53
ATXN2-223	ENST00000551551	DBF4	Q9UBU7	674 aa	Predicted RBP	11.73	□□□□□ -0.53
ATXN2-223	ENST00000551551	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
ATXN2-223	ENST00000551551	VIRMA	Q69YN4	1812 aa	Known RBP	11.72	□□□□□ -0.53
ATXN2-223	ENST00000551551	PXDNL	A1KZ92	1463 aa		11.72	□□□□□ -0.53
ATXN2-223	ENST00000551551	MAP3K15	Q6ZN16	1313 aa		11.72	□□□□□ -0.53
ATXN2-223	ENST00000551551	KDM2B	Q8NHM5	1336 aa		11.72	□□□□□ -0.53
ATXN2-223	ENST00000551551	NPR1	P16066	1061 aa		11.72	□□□□□ -0.53
ATXN2-223	ENST00000551551	DPY19L2	Q6NUT2	758 aa		11.72	□□□□□ -0.53
ATXN2-223	ENST00000551551	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
ATXN2-223	ENST00000551551	HYPK	Q9NX55	129 aa		11.72	□□□□□ -0.53
ATXN2-223	ENST00000551551	RRP7A	Q9Y3A4	280 aa	Known RBP	11.72	□□□□□ -0.53
ATXN2-223	ENST00000551551	KIF13B	Q9NQT8	1826 aa		11.72	□□□□□ -0.53
ATXN2-223	ENST00000551551	KLRG2	A4D1S0	409 aa	Predicted RBP	11.71	□□□□□ -0.53
ATXN2-223	ENST00000551551	LMNB1	P20700	586 aa		11.71	□□□□□ -0.53
ATXN2-223	ENST00000551551	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.71	□□□□□ -0.53
ATXN2-223	ENST00000551551	NBPF26	B4DH59	902 aa		11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	APAF1	O14727	1248 aa		11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	SRGN	P10124	158 aa		11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	EIF2S2	P20042	333 aa	Known RBP	11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	PRR5L	Q6MZQ0	368 aa		11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	NBPF10	Q6P3W6	841 aa	Known RBP	11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	RTKN2	Q8IZC4	609 aa		11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	NBPF15	Q8N660	670 aa		11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	TRIM35	Q9UPQ4	493 aa		11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	LAS1L	Q9Y4W2	734 aa	Known RBP	11.7	□□□□□ -0.54
ATXN2-223	ENST00000551551	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.69	□□□□□ -0.54
ATXN2-223	ENST00000551551	IL16	Q14005	1332 aa		11.69	□□□□□ -0.54
ATXN2-223	ENST00000551551	CCDC146	Q8IYE0	955 aa		11.69	□□□□□ -0.54
ATXN2-223	ENST00000551551	NLRP3	Q96P20	1036 aa		11.69	□□□□□ -0.54
ATXN2-223	ENST00000551551	MRS2	Q9HD23	443 aa		11.69	□□□□□ -0.54
ATXN2-223	ENST00000551551	DDX58	O95786	925 aa	Known RBP	11.68	□□□□□ -0.54
ATXN2-223	ENST00000551551	MYL6B	P14649	208 aa		11.68	□□□□□ -0.54
ATXN2-223	ENST00000551551	C1QTNF8	P60827	252 aa		11.68	□□□□□ -0.54
ATXN2-223	ENST00000551551	HDGFL1	Q5TGJ6	251 aa		11.68	□□□□□ -0.54
ATXN2-223	ENST00000551551	CCDC30	Q5VVM6	783 aa		11.68	□□□□□ -0.54
ATXN2-223	ENST00000551551	WDR63	Q8IWG1	891 aa		11.68	□□□□□ -0.54
ATXN2-223	ENST00000551551	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.68	□□□□□ -0.54
ATXN2-223	ENST00000551551	THUMPD2	Q9BTF0	503 aa	Known RBP	11.68	□□□□□ -0.54
ATXN2-223	ENST00000551551	VPS33B	Q9H267	617 aa		11.68	□□□□□ -0.54
ATXN2-223	ENST00000551551	LTBP3	Q9NS15	1303 aa		11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	PRAMEF22	A3QJZ6	481 aa		11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	MYCN	P04198	464 aa	Predicted RBP	11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	ZNF853	P0CG23	659 aa		11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	CHRNA5	P30532	468 aa		11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	SLC10A5	Q5PT55	438 aa		11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	ANKRD13D	Q6ZTN6	518 aa		11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	TMC4	Q7Z404	712 aa		11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	ZNF34	Q8IZ26	560 aa		11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	UTP14A	Q9BVJ6	771 aa	Known RBP	11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	ATP10D	Q9P241	1426 aa		11.67	□□□□□ -0.54
ATXN2-223	ENST00000551551	TOMM70	O94826	608 aa		11.66	□□□□□ -0.54
ATXN2-223	ENST00000551551	TRIM28	Q13263	835 aa	Known RBP	11.66	□□□□□ -0.54
ATXN2-223	ENST00000551551	TCIRG1	Q13488	830 aa		11.66	□□□□□ -0.54
ATXN2-223	ENST00000551551	C9orf131	Q5VYM1	1079 aa		11.66	□□□□□ -0.54
ATXN2-223	ENST00000551551	COPS6	Q7L5N1	327 aa		11.66	□□□□□ -0.54
ATXN2-223	ENST00000551551	PLBD2	Q8NHP8	589 aa		11.66	□□□□□ -0.54
ATXN2-223	ENST00000551551	RPGR	Q92834	1020 aa	Known RBP	11.66	□□□□□ -0.54
ATXN2-223	ENST00000551551	RBM17	Q96I25	401 aa	Known RBP	11.66	□□□□□ -0.54
ATXN2-223	ENST00000551551	UTRN	P46939	3433 aa		11.66	□□□□□ -0.54
ATXN2-223	ENST00000551551	BBOX1	O75936	387 aa		11.65	□□□□□ -0.54
ATXN2-223	ENST00000551551	HOXA10	P31260	410 aa	Predicted RBP	11.65	□□□□□ -0.54
ATXN2-223	ENST00000551551	POLA2	Q14181	598 aa		11.65	□□□□□ -0.54
ATXN2-223	ENST00000551551	CCDC93	Q567U6	631 aa		11.65	□□□□□ -0.54
ATXN2-223	ENST00000551551	DUSP27	Q5VZP5	1158 aa		11.65	□□□□□ -0.54
ATXN2-223	ENST00000551551	CRAMP1	Q96RY5	1269 aa		11.65	□□□□□ -0.54
ATXN2-223	ENST00000551551	STK31	Q9BXU1	1019 aa		11.65	□□□□□ -0.54
ATXN2-223	ENST00000551551	TAOK3	Q9H2K8	898 aa		11.65	□□□□□ -0.54

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