RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-206	ENST00000550851	PLEKHM2	Q8IWE5	1019 aa		13.8	□□□□□ -0.2
LGR5-206	ENST00000550851	TNPO1	Q92973	898 aa	Known RBP	13.8	□□□□□ -0.2
LGR5-206	ENST00000550851	NAPB	Q9H115	298 aa		13.8	□□□□□ -0.2
LGR5-206	ENST00000550851	BRMS1	Q9HCU9	246 aa		13.8	□□□□□ -0.2
LGR5-206	ENST00000550851	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.8	□□□□□ -0.2
LGR5-206	ENST00000550851	IL17RE	Q8NFR9	667 aa		13.8	□□□□□ -0.2
LGR5-206	ENST00000550851	HELB	Q8NG08	1087 aa	Predicted RBP	13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	TRIM5	Q9C035	493 aa		13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	ZMYM4	Q5VZL5	1548 aa		13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	CAVIN4	Q5BKX8	364 aa		13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	CCAR2	Q8N163	923 aa	Known RBP	13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	SIRT1	Q96EB6	747 aa		13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	LRRC2	Q9BYS8	371 aa		13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	BLM	P54132	1417 aa	Predicted RBP	13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	A1BG	P04217	495 aa		13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	SPATA32	Q96LK8	384 aa		13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	SLAIN2	Q9P270	581 aa		13.79	□□□□□ -0.2
LGR5-206	ENST00000550851	SF3B2	Q13435	895 aa	Known RBP	13.78	□□□□□ -0.2
LGR5-206	ENST00000550851	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.78	□□□□□ -0.2
LGR5-206	ENST00000550851	ZNF496	Q96IT1	587 aa	Predicted RBP	13.78	□□□□□ -0.2
LGR5-206	ENST00000550851	HOOK1	Q9UJC3	728 aa	Known RBP	13.78	□□□□□ -0.2
LGR5-206	ENST00000550851	USP19	O94966	1318 aa		13.78	□□□□□ -0.2
LGR5-206	ENST00000550851	RNF123	Q5XPI4	1314 aa		13.78	□□□□□ -0.2
LGR5-206	ENST00000550851	LIMCH1	Q9UPQ0	1083 aa		13.78	□□□□□ -0.2
LGR5-206	ENST00000550851	MAP3K12	Q12852	859 aa		13.77	□□□□□ -0.2
LGR5-206	ENST00000550851	SLC4A8	Q2Y0W8	1093 aa		13.77	□□□□□ -0.2
LGR5-206	ENST00000550851	TSPY26P	Q9H489	355 aa		13.77	□□□□□ -0.2
LGR5-206	ENST00000550851	KDM5D	Q9BY66	1539 aa		13.77	□□□□□ -0.21
LGR5-206	ENST00000550851	PNMA6E	A0A0J9YXQ4	647 aa		13.77	□□□□□ -0.21
LGR5-206	ENST00000550851	ZNF396	Q96N95	335 aa	Predicted RBP	13.77	□□□□□ -0.21
LGR5-206	ENST00000550851	SYCE3	A1L190	88 aa		13.77	□□□□□ -0.21
LGR5-206	ENST00000550851	TPM3	P06753	285 aa		13.77	□□□□□ -0.21
LGR5-206	ENST00000550851	NECAB1	Q8N987	351 aa		13.77	□□□□□ -0.21
LGR5-206	ENST00000550851	SPC24	Q8NBT2	197 aa		13.77	□□□□□ -0.21
LGR5-206	ENST00000550851	BICC1	Q9H694	974 aa	Known RBP	13.77	□□□□□ -0.21
LGR5-206	ENST00000550851	ZNF213	O14771	459 aa		13.76	□□□□□ -0.21
LGR5-206	ENST00000550851	SLC5A1	P13866	664 aa		13.76	□□□□□ -0.21
LGR5-206	ENST00000550851	TSR1	Q2NL82	804 aa	Known RBP	13.76	□□□□□ -0.21
LGR5-206	ENST00000550851	FAM89A	Q96GI7	184 aa		13.76	□□□□□ -0.21
LGR5-206	ENST00000550851	ESYT1	Q9BSJ8	1104 aa		13.76	□□□□□ -0.21
LGR5-206	ENST00000550851	TFIP11	Q9UBB9	837 aa	Known RBP	13.76	□□□□□ -0.21
LGR5-206	ENST00000550851	TNMD	Q9H2S6	317 aa		13.76	□□□□□ -0.21
LGR5-206	ENST00000550851	GRPEL1	Q9HAV7	217 aa		13.76	□□□□□ -0.21
LGR5-206	ENST00000550851	TCEAL9	Q9UHQ7	104 aa		13.76	□□□□□ -0.21
LGR5-206	ENST00000550851	PLEKHF1	Q96S99	279 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	EFCAB6	Q5THR3	1501 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	RANBP6	O60518	1105 aa	Known RBP	13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	CAMK4	Q16566	473 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	FAM43A	Q8N2R8	423 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	SOS1	Q07889	1333 aa	Predicted RBP	13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	C6orf229	H3BNL8	230 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	TPM1	P09493	284 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	TIMM10	P62072	90 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	ATP2B3	Q16720	1220 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	DZIP3	Q86Y13	1208 aa	Known RBP	13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	HOMER1	Q86YM7	354 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	CCDC144CP	Q8IYA2	1237 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	TMX3	Q96JJ7	454 aa		13.75	□□□□□ -0.21
LGR5-206	ENST00000550851	CCDC47	Q96A33	483 aa	Known RBP	13.74	□□□□□ -0.21
LGR5-206	ENST00000550851	AK7	Q96M32	723 aa		13.74	□□□□□ -0.21
LGR5-206	ENST00000550851	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.74	□□□□□ -0.21
LGR5-206	ENST00000550851	DZIP1	Q86YF9	867 aa	Known RBP	13.74	□□□□□ -0.21
LGR5-206	ENST00000550851	KDM2B	Q8NHM5	1336 aa		13.74	□□□□□ -0.21
LGR5-206	ENST00000550851	RFC4	P35249	363 aa		13.74	□□□□□ -0.21
LGR5-206	ENST00000550851	RBM8A	Q9Y5S9	174 aa	Known RBP	13.74	□□□□□ -0.21
LGR5-206	ENST00000550851	KDM5A	P29375	1690 aa	Known RBP	13.74	□□□□□ -0.21
LGR5-206	ENST00000550851	DTNB	O60941	627 aa		13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	EIF4A1	P60842	406 aa	Known RBP	13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	BRF1	Q92994	677 aa		13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	LMTK3	Q96Q04	1460 aa		13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	USP5	P45974	858 aa		13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	ANKRD20A12P	Q8NF67	263 aa		13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	USP16	Q9Y5T5	823 aa		13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	TFCP2	Q12800	502 aa		13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	OLFM4	Q6UX06	510 aa		13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	CDC5L	Q99459	802 aa	Known RBP	13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	HECW2	Q9P2P5	1572 aa		13.73	□□□□□ -0.21
LGR5-206	ENST00000550851	PDILT	Q8N807	584 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	NEK1	Q96PY6	1258 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	MYOM2	P54296	1465 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	CCDC192	P0DO97	292 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	SLC52A2	Q9HAB3	445 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	NDUFB9	Q9Y6M9	179 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	SMC2	O95347	1197 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	BRPF1	P55201	1214 aa	Predicted RBP	13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	DNAJC10	Q8IXB1	793 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	JMY	Q8N9B5	988 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	RPGR	Q92834	1020 aa	Known RBP	13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	NAT10	Q9H0A0	1025 aa	Known RBP	13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	CFAP45	Q9UL16	551 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	ABCC3	O15438	1527 aa		13.72	□□□□□ -0.21
LGR5-206	ENST00000550851	TMEM94	Q12767	1356 aa		13.71	□□□□□ -0.21
LGR5-206	ENST00000550851	PCDH11X	Q9BZA7	1347 aa		13.71	□□□□□ -0.21
LGR5-206	ENST00000550851	PCDH11Y	Q9BZA8	1340 aa		13.71	□□□□□ -0.21
LGR5-206	ENST00000550851	GOLGA8B	A8MQT2	603 aa		13.71	□□□□□ -0.21

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