RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 JMYQ8N9B5 988 aa18.9■□□□□ 0.62
TPCN1-213ENST00000550543 SIPA1L3O60292 1781 aaPredicted RBP18.9■□□□□ 0.62
TPCN1-213ENST00000550543 SBF1O95248 1867 aa18.9■□□□□ 0.62
TPCN1-213ENST00000550543 C21orf2O43822 256 aa18.89■□□□□ 0.61
TPCN1-213ENST00000550543 WDR90Q96KV7 1748 aa18.88■□□□□ 0.61
TPCN1-213ENST00000550543 SRGNP10124 158 aa18.88■□□□□ 0.61
TPCN1-213ENST00000550543 TAF7Q15545 349 aaPredicted RBP18.88■□□□□ 0.61
TPCN1-213ENST00000550543 NPR1P16066 1061 aa18.87■□□□□ 0.61
TPCN1-213ENST00000550543 PRPF40BQ6NWY9 871 aaKnown RBP18.87■□□□□ 0.61
TPCN1-213ENST00000550543 USP16Q9Y5T5 823 aa18.87■□□□□ 0.61
TPCN1-213ENST00000550543 IQCA1LA6NCM1 817 aa18.86■□□□□ 0.61
TPCN1-213ENST00000550543 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
TPCN1-213ENST00000550543 MCM10Q7L590 875 aa18.86■□□□□ 0.61
TPCN1-213ENST00000550543 KCNQ3O43525 872 aa18.85■□□□□ 0.61
TPCN1-213ENST00000550543 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
TPCN1-213ENST00000550543 ALDH1B1P30837 517 aa18.84■□□□□ 0.61
TPCN1-213ENST00000550543 RTKN2Q8IZC4 609 aa18.84■□□□□ 0.61
TPCN1-213ENST00000550543 NYXQ9GZU5 481 aa18.84■□□□□ 0.61
TPCN1-213ENST00000550543 NIP7Q9Y221 180 aaKnown RBP eCLIP18.84■□□□□ 0.61
TPCN1-213ENST00000550543 KLRG2A4D1S0 409 aaPredicted RBP18.83■□□□□ 0.6
TPCN1-213ENST00000550543 PRELPP51888 382 aa18.83■□□□□ 0.6
TPCN1-213ENST00000550543 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
TPCN1-213ENST00000550543 GRIPAP1Q4V328 841 aa18.82■□□□□ 0.6
TPCN1-213ENST00000550543 TIAM2Q8IVF5 1701 aa18.82■□□□□ 0.6
TPCN1-213ENST00000550543 BCORQ6W2J9 1755 aa18.81■□□□□ 0.6
TPCN1-213ENST00000550543 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
TPCN1-213ENST00000550543 CCDC24Q8N4L8 307 aa18.81■□□□□ 0.6
TPCN1-213ENST00000550543 ANKRD31Q8N7Z5 1873 aa18.81■□□□□ 0.6
TPCN1-213ENST00000550543 MAPK8IP3Q9UPT6 1336 aa18.8■□□□□ 0.6
TPCN1-213ENST00000550543 CC2D2BQ6DHV5 1058 aa18.8■□□□□ 0.6
TPCN1-213ENST00000550543 CHADLQ6NUI6 762 aa18.8■□□□□ 0.6
TPCN1-213ENST00000550543 KIF6Q6ZMV9 814 aa18.8■□□□□ 0.6
TPCN1-213ENST00000550543 FKBP4Q02790 459 aaKnown RBP eCLIP18.79■□□□□ 0.6
TPCN1-213ENST00000550543 L3MBTL3Q96JM7 780 aaPredicted RBP18.79■□□□□ 0.6
TPCN1-213ENST00000550543 ERBB4Q15303 1308 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 FER1L6Q2WGJ9 1857 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 NBPF26B4DH59 902 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 HTRA3P83110 453 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 DCTN1Q14203 1278 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 NBPF10Q6P3W6 841 aaKnown RBP18.78■□□□□ 0.6
TPCN1-213ENST00000550543 NBPF15Q8N660 670 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 C7orf43Q8WVR3 580 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 IBTKQ9P2D0 1353 aaPredicted RBP18.78■□□□□ 0.6
TPCN1-213ENST00000550543 COL11A2P13942 1736 aaPredicted RBP18.77■□□□□ 0.6
TPCN1-213ENST00000550543 PRAMEF22A3QJZ6 481 aa18.77■□□□□ 0.6
TPCN1-213ENST00000550543 PIP4K2AP48426 406 aaPredicted RBP18.77■□□□□ 0.6
TPCN1-213ENST00000550543 NFE2L2Q16236 605 aa18.77■□□□□ 0.6
TPCN1-213ENST00000550543 LDHDQ86WU2 507 aa18.77■□□□□ 0.6
TPCN1-213ENST00000550543 CREBZFQ9NS37 354 aa18.77■□□□□ 0.6
TPCN1-213ENST00000550543 DICER1Q9UPY3 1922 aaKnown RBP18.76■□□□□ 0.59
TPCN1-213ENST00000550543 POTECB2RU33 542 aa18.76■□□□□ 0.59
TPCN1-213ENST00000550543 TMX4Q9H1E5 349 aaPredicted RBP18.76■□□□□ 0.59
TPCN1-213ENST00000550543 ARFGEF2Q9Y6D5 1785 aa18.76■□□□□ 0.59
TPCN1-213ENST00000550543 MAP3K15Q6ZN16 1313 aa18.75■□□□□ 0.59
TPCN1-213ENST00000550543 DDNO94850 711 aaPredicted RBP18.75■□□□□ 0.59
TPCN1-213ENST00000550543 JDP2Q8WYK2 163 aa18.75■□□□□ 0.59
TPCN1-213ENST00000550543 LMOD3Q0VAK6 560 aa18.74■□□□□ 0.59
TPCN1-213ENST00000550543 PNMA8AQ86V59 439 aaPredicted RBP18.74■□□□□ 0.59
TPCN1-213ENST00000550543 RPGRQ92834 1020 aaKnown RBP18.74■□□□□ 0.59
TPCN1-213ENST00000550543 PSMD1Q99460 953 aa18.74■□□□□ 0.59
TPCN1-213ENST00000550543 BABAM1Q9NWV8 329 aa18.74■□□□□ 0.59
TPCN1-213ENST00000550543 RIC1Q4ADV7 1423 aa18.74■□□□□ 0.59
TPCN1-213ENST00000550543 SLX4Q8IY92 1834 aa18.73■□□□□ 0.59
TPCN1-213ENST00000550543 EIF4A1P60842 406 aaKnown RBP18.73■□□□□ 0.59
TPCN1-213ENST00000550543 CRY2Q49AN0 593 aa18.73■□□□□ 0.59
TPCN1-213ENST00000550543 HACL1Q9UJ83 578 aa18.73■□□□□ 0.59
TPCN1-213ENST00000550543 CCDC88AQ3V6T2 1871 aa18.73■□□□□ 0.59
TPCN1-213ENST00000550543 FAM177BA6PVY3 158 aa18.72■□□□□ 0.59
TPCN1-213ENST00000550543 IARSP41252 1262 aaKnown RBP18.72■□□□□ 0.59
TPCN1-213ENST00000550543 PARP10Q53GL7 1025 aa18.72■□□□□ 0.59
TPCN1-213ENST00000550543 PPP1R42Q7Z4L9 355 aa18.72■□□□□ 0.59
TPCN1-213ENST00000550543 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
TPCN1-213ENST00000550543 TAF1DQ9H5J8 278 aaPredicted RBP18.72■□□□□ 0.59
TPCN1-213ENST00000550543 LAMB4A4D0S4 1761 aa18.71■□□□□ 0.59
TPCN1-213ENST00000550543 RALBP1Q15311 655 aa18.71■□□□□ 0.59
TPCN1-213ENST00000550543 HLFQ16534 295 aa18.71■□□□□ 0.59
TPCN1-213ENST00000550543 RBM17Q96I25 401 aaKnown RBP18.71■□□□□ 0.59
TPCN1-213ENST00000550543 ZNF277Q9NRM2 450 aaPredicted RBP18.71■□□□□ 0.59
TPCN1-213ENST00000550543 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
TPCN1-213ENST00000550543 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
TPCN1-213ENST00000550543 HOXA10P31260 410 aaPredicted RBP18.7■□□□□ 0.58
TPCN1-213ENST00000550543 EIF6P56537 245 aaKnown RBP18.7■□□□□ 0.58
TPCN1-213ENST00000550543 TNS4Q8IZW8 715 aa18.7■□□□□ 0.58
TPCN1-213ENST00000550543 GPC2Q8N158 579 aa18.7■□□□□ 0.58
TPCN1-213ENST00000550543 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
TPCN1-213ENST00000550543 RNF123Q5XPI4 1314 aa18.7■□□□□ 0.58
TPCN1-213ENST00000550543 HSPA1AP0DMV8 641 aaKnown RBP18.69■□□□□ 0.58
TPCN1-213ENST00000550543 HSPA1BP0DMV9 641 aaKnown RBP18.69■□□□□ 0.58
TPCN1-213ENST00000550543 NGEFQ8N5V2 710 aa18.69■□□□□ 0.58
TPCN1-213ENST00000550543 CRAMP1Q96RY5 1269 aa18.69■□□□□ 0.58
TPCN1-213ENST00000550543 TSPYL4Q9UJ04 414 aa18.69■□□□□ 0.58
TPCN1-213ENST00000550543 SCN4AP35499 1836 aa18.69■□□□□ 0.58
TPCN1-213ENST00000550543 FZD9O00144 591 aa18.68■□□□□ 0.58
TPCN1-213ENST00000550543 LMOD1P29536 600 aaPredicted RBP18.68■□□□□ 0.58
TPCN1-213ENST00000550543 EPHX2P34913 555 aa18.68■□□□□ 0.58
TPCN1-213ENST00000550543 HSP90AB3PQ58FF7 597 aa18.68■□□□□ 0.58
TPCN1-213ENST00000550543 GIGYF2Q6Y7W6 1299 aaKnown RBP18.68■□□□□ 0.58
TPCN1-213ENST00000550543 VPS33BQ9H267 617 aa18.68■□□□□ 0.58
TPCN1-213ENST00000550543 MYL6BP14649 208 aa18.67■□□□□ 0.58
TPCN1-213ENST00000550543 EAPPQ56P03 285 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms