RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 JMYQ8N9B5 988 aa18.9■□□□□ 0.62
TPCN1-213ENST00000550543 SIPA1L3O60292 1781 aaPredicted RBP18.9■□□□□ 0.62
TPCN1-213ENST00000550543 SBF1O95248 1867 aa18.9■□□□□ 0.62
TPCN1-213ENST00000550543 C21orf2O43822 256 aa18.89■□□□□ 0.61
TPCN1-213ENST00000550543 WDR90Q96KV7 1748 aa18.88■□□□□ 0.61
TPCN1-213ENST00000550543 SRGNP10124 158 aa18.88■□□□□ 0.61
TPCN1-213ENST00000550543 TAF7Q15545 349 aaPredicted RBP18.88■□□□□ 0.61
TPCN1-213ENST00000550543 NPR1P16066 1061 aa18.87■□□□□ 0.61
TPCN1-213ENST00000550543 PRPF40BQ6NWY9 871 aaKnown RBP18.87■□□□□ 0.61
TPCN1-213ENST00000550543 USP16Q9Y5T5 823 aa18.87■□□□□ 0.61
TPCN1-213ENST00000550543 IQCA1LA6NCM1 817 aa18.86■□□□□ 0.61
TPCN1-213ENST00000550543 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
TPCN1-213ENST00000550543 MCM10Q7L590 875 aa18.86■□□□□ 0.61
TPCN1-213ENST00000550543 KCNQ3O43525 872 aa18.85■□□□□ 0.61
TPCN1-213ENST00000550543 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
TPCN1-213ENST00000550543 ALDH1B1P30837 517 aa18.84■□□□□ 0.61
TPCN1-213ENST00000550543 RTKN2Q8IZC4 609 aa18.84■□□□□ 0.61
TPCN1-213ENST00000550543 NYXQ9GZU5 481 aa18.84■□□□□ 0.61
TPCN1-213ENST00000550543 NIP7Q9Y221 180 aaKnown RBP eCLIP18.84■□□□□ 0.61
TPCN1-213ENST00000550543 KLRG2A4D1S0 409 aaPredicted RBP18.83■□□□□ 0.6
TPCN1-213ENST00000550543 PRELPP51888 382 aa18.83■□□□□ 0.6
TPCN1-213ENST00000550543 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
TPCN1-213ENST00000550543 GRIPAP1Q4V328 841 aa18.82■□□□□ 0.6
TPCN1-213ENST00000550543 TIAM2Q8IVF5 1701 aa18.82■□□□□ 0.6
TPCN1-213ENST00000550543 BCORQ6W2J9 1755 aa18.81■□□□□ 0.6
TPCN1-213ENST00000550543 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
TPCN1-213ENST00000550543 CCDC24Q8N4L8 307 aa18.81■□□□□ 0.6
TPCN1-213ENST00000550543 ANKRD31Q8N7Z5 1873 aa18.81■□□□□ 0.6
TPCN1-213ENST00000550543 MAPK8IP3Q9UPT6 1336 aa18.8■□□□□ 0.6
TPCN1-213ENST00000550543 CC2D2BQ6DHV5 1058 aa18.8■□□□□ 0.6
TPCN1-213ENST00000550543 CHADLQ6NUI6 762 aa18.8■□□□□ 0.6
TPCN1-213ENST00000550543 KIF6Q6ZMV9 814 aa18.8■□□□□ 0.6
TPCN1-213ENST00000550543 FKBP4Q02790 459 aaKnown RBP eCLIP18.79■□□□□ 0.6
TPCN1-213ENST00000550543 L3MBTL3Q96JM7 780 aaPredicted RBP18.79■□□□□ 0.6
TPCN1-213ENST00000550543 ERBB4Q15303 1308 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 FER1L6Q2WGJ9 1857 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 NBPF26B4DH59 902 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 HTRA3P83110 453 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 DCTN1Q14203 1278 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 NBPF10Q6P3W6 841 aaKnown RBP18.78■□□□□ 0.6
TPCN1-213ENST00000550543 NBPF15Q8N660 670 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 C7orf43Q8WVR3 580 aa18.78■□□□□ 0.6
TPCN1-213ENST00000550543 IBTKQ9P2D0 1353 aaPredicted RBP18.78■□□□□ 0.6
TPCN1-213ENST00000550543 COL11A2P13942 1736 aaPredicted RBP18.77■□□□□ 0.6
TPCN1-213ENST00000550543 PRAMEF22A3QJZ6 481 aa18.77■□□□□ 0.6
TPCN1-213ENST00000550543 PIP4K2AP48426 406 aaPredicted RBP18.77■□□□□ 0.6
TPCN1-213ENST00000550543 NFE2L2Q16236 605 aa18.77■□□□□ 0.6
TPCN1-213ENST00000550543 LDHDQ86WU2 507 aa18.77■□□□□ 0.6
TPCN1-213ENST00000550543 CREBZFQ9NS37 354 aa18.77■□□□□ 0.6
TPCN1-213ENST00000550543 DICER1Q9UPY3 1922 aaKnown RBP18.76■□□□□ 0.59
TPCN1-213ENST00000550543 POTECB2RU33 542 aa18.76■□□□□ 0.59
TPCN1-213ENST00000550543 TMX4Q9H1E5 349 aaPredicted RBP18.76■□□□□ 0.59
TPCN1-213ENST00000550543 ARFGEF2Q9Y6D5 1785 aa18.76■□□□□ 0.59
TPCN1-213ENST00000550543 MAP3K15Q6ZN16 1313 aa18.75■□□□□ 0.59
TPCN1-213ENST00000550543 DDNO94850 711 aaPredicted RBP18.75■□□□□ 0.59
TPCN1-213ENST00000550543 JDP2Q8WYK2 163 aa18.75■□□□□ 0.59
TPCN1-213ENST00000550543 LMOD3Q0VAK6 560 aa18.74■□□□□ 0.59
TPCN1-213ENST00000550543 PNMA8AQ86V59 439 aaPredicted RBP18.74■□□□□ 0.59
TPCN1-213ENST00000550543 RPGRQ92834 1020 aaKnown RBP18.74■□□□□ 0.59
TPCN1-213ENST00000550543 PSMD1Q99460 953 aa18.74■□□□□ 0.59
TPCN1-213ENST00000550543 BABAM1Q9NWV8 329 aa18.74■□□□□ 0.59
TPCN1-213ENST00000550543 RIC1Q4ADV7 1423 aa18.74■□□□□ 0.59
TPCN1-213ENST00000550543 SLX4Q8IY92 1834 aa18.73■□□□□ 0.59
TPCN1-213ENST00000550543 EIF4A1P60842 406 aaKnown RBP18.73■□□□□ 0.59
TPCN1-213ENST00000550543 CRY2Q49AN0 593 aa18.73■□□□□ 0.59
TPCN1-213ENST00000550543 HACL1Q9UJ83 578 aa18.73■□□□□ 0.59
TPCN1-213ENST00000550543 CCDC88AQ3V6T2 1871 aa18.73■□□□□ 0.59
TPCN1-213ENST00000550543 FAM177BA6PVY3 158 aa18.72■□□□□ 0.59
TPCN1-213ENST00000550543 IARSP41252 1262 aaKnown RBP18.72■□□□□ 0.59
TPCN1-213ENST00000550543 PARP10Q53GL7 1025 aa18.72■□□□□ 0.59
TPCN1-213ENST00000550543 PPP1R42Q7Z4L9 355 aa18.72■□□□□ 0.59
TPCN1-213ENST00000550543 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
TPCN1-213ENST00000550543 TAF1DQ9H5J8 278 aaPredicted RBP18.72■□□□□ 0.59
TPCN1-213ENST00000550543 LAMB4A4D0S4 1761 aa18.71■□□□□ 0.59
TPCN1-213ENST00000550543 RALBP1Q15311 655 aa18.71■□□□□ 0.59
TPCN1-213ENST00000550543 HLFQ16534 295 aa18.71■□□□□ 0.59
TPCN1-213ENST00000550543 RBM17Q96I25 401 aaKnown RBP18.71■□□□□ 0.59
TPCN1-213ENST00000550543 ZNF277Q9NRM2 450 aaPredicted RBP18.71■□□□□ 0.59
TPCN1-213ENST00000550543 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
TPCN1-213ENST00000550543 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
TPCN1-213ENST00000550543 HOXA10P31260 410 aaPredicted RBP18.7■□□□□ 0.58
TPCN1-213ENST00000550543 EIF6P56537 245 aaKnown RBP18.7■□□□□ 0.58
TPCN1-213ENST00000550543 TNS4Q8IZW8 715 aa18.7■□□□□ 0.58
TPCN1-213ENST00000550543 GPC2Q8N158 579 aa18.7■□□□□ 0.58
TPCN1-213ENST00000550543 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
TPCN1-213ENST00000550543 RNF123Q5XPI4 1314 aa18.7■□□□□ 0.58
TPCN1-213ENST00000550543 HSPA1AP0DMV8 641 aaKnown RBP18.69■□□□□ 0.58
TPCN1-213ENST00000550543 HSPA1BP0DMV9 641 aaKnown RBP18.69■□□□□ 0.58
TPCN1-213ENST00000550543 NGEFQ8N5V2 710 aa18.69■□□□□ 0.58
TPCN1-213ENST00000550543 CRAMP1Q96RY5 1269 aa18.69■□□□□ 0.58
TPCN1-213ENST00000550543 TSPYL4Q9UJ04 414 aa18.69■□□□□ 0.58
TPCN1-213ENST00000550543 SCN4AP35499 1836 aa18.69■□□□□ 0.58
TPCN1-213ENST00000550543 FZD9O00144 591 aa18.68■□□□□ 0.58
TPCN1-213ENST00000550543 LMOD1P29536 600 aaPredicted RBP18.68■□□□□ 0.58
TPCN1-213ENST00000550543 EPHX2P34913 555 aa18.68■□□□□ 0.58
TPCN1-213ENST00000550543 HSP90AB3PQ58FF7 597 aa18.68■□□□□ 0.58
TPCN1-213ENST00000550543 GIGYF2Q6Y7W6 1299 aaKnown RBP18.68■□□□□ 0.58
TPCN1-213ENST00000550543 VPS33BQ9H267 617 aa18.68■□□□□ 0.58
TPCN1-213ENST00000550543 MYL6BP14649 208 aa18.67■□□□□ 0.58
TPCN1-213ENST00000550543 EAPPQ56P03 285 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms