RNA–Protein interactions for RNA: ENST00000550455.5

CCT2-209, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-209ENST00000550455 A1BGP04217 495 aa13.8□□□□□ -0.2
CCT2-209ENST00000550455 SNRPA1P09661 255 aaKnown RBP13.8□□□□□ -0.2
CCT2-209ENST00000550455 PRKAR2BP31323 418 aa13.8□□□□□ -0.2
CCT2-209ENST00000550455 COL13A1Q5TAT6 717 aaPredicted RBP13.8□□□□□ -0.2
CCT2-209ENST00000550455 BCORQ6W2J9 1755 aa13.79□□□□□ -0.2
CCT2-209ENST00000550455 ARFGEF2Q9Y6D5 1785 aa13.79□□□□□ -0.2
CCT2-209ENST00000550455 IQCA1LA6NCM1 817 aa13.79□□□□□ -0.2
CCT2-209ENST00000550455 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
CCT2-209ENST00000550455 PRPF40BQ6NWY9 871 aaKnown RBP13.79□□□□□ -0.2
CCT2-209ENST00000550455 RTF1Q92541 710 aaKnown RBP13.79□□□□□ -0.2
CCT2-209ENST00000550455 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
CCT2-209ENST00000550455 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
CCT2-209ENST00000550455 ZNF330Q9Y3S2 320 aaPredicted RBP13.79□□□□□ -0.2
CCT2-209ENST00000550455 COL11A2P13942 1736 aaPredicted RBP13.78□□□□□ -0.2
CCT2-209ENST00000550455 NPR1P16066 1061 aa13.78□□□□□ -0.2
CCT2-209ENST00000550455 TPTE2Q6XPS3 522 aa13.78□□□□□ -0.2
CCT2-209ENST00000550455 C7orf43Q8WVR3 580 aa13.78□□□□□ -0.2
CCT2-209ENST00000550455 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
CCT2-209ENST00000550455 USP16Q9Y5T5 823 aa13.78□□□□□ -0.2
CCT2-209ENST00000550455 PCNTO95613 3336 aa13.77□□□□□ -0.21
CCT2-209ENST00000550455 CCDC93Q567U6 631 aa13.77□□□□□ -0.21
CCT2-209ENST00000550455 NBPF5PQ86XG9 351 aaPredicted RBP13.77□□□□□ -0.21
CCT2-209ENST00000550455 KCNQ3O43525 872 aa13.76□□□□□ -0.21
CCT2-209ENST00000550455 ALDH1B1P30837 517 aa13.76□□□□□ -0.21
CCT2-209ENST00000550455 RTKN2Q8IZC4 609 aa13.76□□□□□ -0.21
CCT2-209ENST00000550455 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
CCT2-209ENST00000550455 DDNO94850 711 aaPredicted RBP13.75□□□□□ -0.21
CCT2-209ENST00000550455 HSPA1AP0DMV8 641 aaKnown RBP13.75□□□□□ -0.21
CCT2-209ENST00000550455 HSPA1BP0DMV9 641 aaKnown RBP13.75□□□□□ -0.21
CCT2-209ENST00000550455 FKBP4Q02790 459 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCT2-209ENST00000550455 LDHDQ86WU2 507 aa13.75□□□□□ -0.21
CCT2-209ENST00000550455 SCN4AP35499 1836 aa13.75□□□□□ -0.21
CCT2-209ENST00000550455 SLX4Q8IY92 1834 aa13.75□□□□□ -0.21
CCT2-209ENST00000550455 U2AF1L5P0DN76 240 aaPredicted RBP13.74□□□□□ -0.21
CCT2-209ENST00000550455 U2AF1Q01081 240 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCT2-209ENST00000550455 TAF7Q15545 349 aaPredicted RBP13.74□□□□□ -0.21
CCT2-209ENST00000550455 GRIPAP1Q4V328 841 aa13.74□□□□□ -0.21
CCT2-209ENST00000550455 CCDC24Q8N4L8 307 aa13.74□□□□□ -0.21
CCT2-209ENST00000550455 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
CCT2-209ENST00000550455 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
CCT2-209ENST00000550455 PASKQ96RG2 1323 aa13.73□□□□□ -0.21
CCT2-209ENST00000550455 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
CCT2-209ENST00000550455 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
CCT2-209ENST00000550455 CC2D2BQ6DHV5 1058 aa13.73□□□□□ -0.21
CCT2-209ENST00000550455 NIP7Q9Y221 180 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCT2-209ENST00000550455 NBPF26B4DH59 902 aa13.72□□□□□ -0.21
CCT2-209ENST00000550455 NBPF10Q6P3W6 841 aaKnown RBP13.72□□□□□ -0.21
CCT2-209ENST00000550455 MCM10Q7L590 875 aa13.72□□□□□ -0.21
CCT2-209ENST00000550455 PNMA8AQ86V59 439 aaPredicted RBP13.72□□□□□ -0.21
CCT2-209ENST00000550455 NBPF15Q8N660 670 aa13.72□□□□□ -0.21
CCT2-209ENST00000550455 NYXQ9GZU5 481 aa13.72□□□□□ -0.21
CCT2-209ENST00000550455 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
CCT2-209ENST00000550455 RIC1Q4ADV7 1423 aa13.72□□□□□ -0.21
CCT2-209ENST00000550455 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.21
CCT2-209ENST00000550455 PRAMEF22A3QJZ6 481 aa13.71□□□□□ -0.21
CCT2-209ENST00000550455 NEFMP07197 916 aa13.71□□□□□ -0.21
CCT2-209ENST00000550455 CRY2Q49AN0 593 aa13.71□□□□□ -0.21
CCT2-209ENST00000550455 PSMD1Q99460 953 aa13.71□□□□□ -0.21
CCT2-209ENST00000550455 CNTNAP1P78357 1384 aa13.71□□□□□ -0.22
CCT2-209ENST00000550455 FZD9O00144 591 aa13.7□□□□□ -0.22
CCT2-209ENST00000550455 GPC2Q8N158 579 aa13.7□□□□□ -0.22
CCT2-209ENST00000550455 HACL1Q9UJ83 578 aa13.7□□□□□ -0.22
CCT2-209ENST00000550455 TMEM88BA6NKF7 163 aa13.69□□□□□ -0.22
CCT2-209ENST00000550455 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
CCT2-209ENST00000550455 POTEIP0CG38 1075 aa13.69□□□□□ -0.22
CCT2-209ENST00000550455 POTEJP0CG39 1038 aa13.69□□□□□ -0.22
CCT2-209ENST00000550455 GTF2E1P29083 439 aaPredicted RBP13.69□□□□□ -0.22
CCT2-209ENST00000550455 HOXA10P31260 410 aaPredicted RBP13.69□□□□□ -0.22
CCT2-209ENST00000550455 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
CCT2-209ENST00000550455 PIP4K2AP48426 406 aaPredicted RBP13.69□□□□□ -0.22
CCT2-209ENST00000550455 SNED1Q8TER0 1413 aa13.69□□□□□ -0.22
CCT2-209ENST00000550455 LAMB4A4D0S4 1761 aa13.68□□□□□ -0.22
CCT2-209ENST00000550455 ERBB4Q15303 1308 aa13.68□□□□□ -0.22
CCT2-209ENST00000550455 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
CCT2-209ENST00000550455 JDP2Q8WYK2 163 aa13.68□□□□□ -0.22
CCT2-209ENST00000550455 PNNQ9H307 717 aaKnown RBP13.68□□□□□ -0.22
CCT2-209ENST00000550455 PRDM10Q9NQV6 1147 aa13.68□□□□□ -0.22
CCT2-209ENST00000550455 MAP3K15Q6ZN16 1313 aa13.67□□□□□ -0.22
CCT2-209ENST00000550455 EPHX2P34913 555 aa13.67□□□□□ -0.22
CCT2-209ENST00000550455 CNGB1Q14028 1251 aaPredicted RBP13.67□□□□□ -0.22
CCT2-209ENST00000550455 DCTN1Q14203 1278 aa13.67□□□□□ -0.22
CCT2-209ENST00000550455 HLFQ16534 295 aa13.67□□□□□ -0.22
CCT2-209ENST00000550455 SYNE4Q8N205 404 aa13.67□□□□□ -0.22
CCT2-209ENST00000550455 VPS33BQ9H267 617 aa13.67□□□□□ -0.22
CCT2-209ENST00000550455 ZNF277Q9NRM2 450 aaPredicted RBP13.67□□□□□ -0.22
CCT2-209ENST00000550455 MKRN1Q9UHC7 482 aaKnown RBP13.67□□□□□ -0.22
CCT2-209ENST00000550455 ADAMTSL1Q8N6G6 1762 aa13.67□□□□□ -0.22
CCT2-209ENST00000550455 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
CCT2-209ENST00000550455 ZNF541Q9H0D2 1346 aa13.65□□□□□ -0.22
CCT2-209ENST00000550455 RASSF10A6NK89 507 aa13.65□□□□□ -0.22
CCT2-209ENST00000550455 EIF4A1P60842 406 aaKnown RBP13.65□□□□□ -0.22
CCT2-209ENST00000550455 CRAMP1Q96RY5 1269 aa13.65□□□□□ -0.22
CCT2-209ENST00000550455 KDM3BQ7LBC6 1761 aa13.65□□□□□ -0.22
CCT2-209ENST00000550455 CTCFP49711 727 aaPredicted RBP13.64□□□□□ -0.23
CCT2-209ENST00000550455 EIF6P56537 245 aaKnown RBP13.64□□□□□ -0.23
CCT2-209ENST00000550455 EAPPQ56P03 285 aaPredicted RBP13.64□□□□□ -0.23
CCT2-209ENST00000550455 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
CCT2-209ENST00000550455 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
CCT2-209ENST00000550455 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
CCT2-209ENST00000550455 BABAM1Q9NWV8 329 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms